Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4242

Experiment: LB 30C timecourse2 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse2 timepoint 2
4,423,660	+		Psest_4239	0.65	+0.4
4,423,660	+		Psest_4239	0.65	-0.8
4,423,660	+		Psest_4239	0.65	-0.1
4,423,660	+		Psest_4239	0.65	-1.1
4,423,660	+		Psest_4239	0.65	-0.5
4,423,661	-		Psest_4239	0.65	-0.8
4,423,661	-		Psest_4239	0.65	+1.8
4,423,661	-		Psest_4239	0.65	-0.8
4,423,661	-		Psest_4239	0.65	+0.7
4,423,661	-		Psest_4239	0.65	+0.9
4,423,661	-		Psest_4239	0.65	+2.5
4,423,661	-		Psest_4239	0.65	-0.1
4,423,661	-		Psest_4239	0.65	-0.8
4,423,664	+		Psest_4239	0.66	-1.5
4,423,664	+		Psest_4239	0.66	-0.8
4,423,664	+		Psest_4239	0.66	-1.1
4,423,664	+		Psest_4239	0.66	-0.5
4,423,664	+		Psest_4239	0.66	+0.5
4,423,665	-		Psest_4239	0.66	-1.6
4,423,665	-		Psest_4239	0.66	+2.5
4,423,665	-		Psest_4239	0.66	+1.5
4,423,665	-		Psest_4239	0.66	+3.1
4,423,665	-		Psest_4239	0.66	+0.6
4,423,665	-		Psest_4239	0.66	+0.5
4,423,665	-		Psest_4239	0.66	+0.4
4,424,051	+				+1.5
4,424,051	+				-0.9
4,424,051	+				+0.3
4,424,051	+				+1.1
4,424,051	+				-1.5
4,424,051	+				+0.5
4,424,051	+				+0.2
4,424,051	+				-0.8
4,424,051	+				-0.1
4,424,051	+				+0.9
4,424,051	+				-0.5
4,424,147	+				+1.0
4,424,147	+				-0.1
4,424,147	+				+0.8
4,424,147	+				+1.8
4,424,147	+				-0.1
4,424,147	+				-1.1
4,424,148	-				-0.5
4,424,148	-				+2.5
4,424,148	-				-1.1
4,424,148	-				+1.5
4,424,148	-				+0.5
4,424,148	-				-0.8
4,424,148	-				+2.5
4,424,148	-				-0.1
4,424,148	-				+1.0
4,424,148	-				-2.1
4,424,148	-				+0.5
4,424,148	-				-1.1
4,424,148	-				+0.5
4,424,149	+				+2.1
4,424,149	+				+1.5
4,424,149	+				-2.5
4,424,149	+				+1.1
4,424,149	+				+1.5
4,424,149	+				+1.1
4,424,149	+				-0.5
4,424,149	+				+0.9
4,424,149	+				+1.7
4,424,149	+				-1.3
4,424,149	+				-0.8
4,424,149	+				+0.1
4,424,149	+				+0.8
4,424,149	+				+2.6
4,424,149	+				+0.4
4,424,149	+				-0.8
4,424,149	+				+0.2
4,424,149	+				+0.5
4,424,149	+				+2.1
4,424,149	+				+0.1
4,424,149	+				+0.3
4,424,149	+				+1.8
4,424,149	+				+0.4
4,424,149	+				+0.8
4,424,149	+				+1.6
4,424,149	+				+1.1
4,424,149	+				+0.3
4,424,149	+				+2.5
4,424,149	+				-0.7
4,424,149	+				-0.5
4,424,149	+				+0.5
4,424,149	+				+0.4
4,424,149	+				+0.0
4,424,149	+				-0.8
4,424,149	+				-1.8
4,424,149	+				-0.2
4,424,149	+				-0.1
4,424,149	+				-0.1
4,424,149	+				-1.1
4,424,149	+				+2.5
4,424,149	+				+1.8
4,424,149	+				+0.2
4,424,149	+				+2.6
4,424,149	+				+0.5
4,424,149	+				+0.0
4,424,149	+				+2.5
4,424,149	+				+0.1
4,424,149	+				-0.1
4,424,149	+				+1.8
4,424,149	+				-0.1
4,424,149	+				+2.4
4,424,149	+				-1.1
4,424,149	+				+1.5
4,424,149	+				-1.1
4,424,149	+				+1.5
4,424,149	+				+1.6
4,424,150	-				+1.5
4,424,150	-				-0.3
4,424,150	-				-0.1
4,424,150	-				-0.5
4,424,150	-				-0.5
4,424,150	-				+1.5
4,424,150	-				-0.5
4,424,150	-				+1.5
4,424,150	-				-0.3
4,424,150	-				-1.5
4,424,150	-				-0.7
4,424,150	-				+1.5
4,424,150	-				-0.5
4,424,150	-				+0.5
4,424,150	-				-0.1
4,424,150	-				+1.5
4,424,150	-				+0.5
4,424,150	-				-0.7
4,424,150	-				+3.1
4,424,150	-				-0.1
4,424,150	-				-0.8
4,424,150	-				-0.5
4,424,150	-				-0.3
4,424,150	-				+0.5
4,424,150	-				-1.1
4,424,150	-				+0.5
4,424,150	-				+0.5
4,424,150	-				+0.5
4,424,150	-				+1.5
4,424,150	-				-1.3
4,424,150	-				+2.1
4,424,150	-				+3.8
4,424,150	-				+1.5
4,424,150	-				-0.5
4,424,150	-				+0.5
4,424,150	-				-1.8
4,424,150	-				+1.5
4,424,150	-				-1.8
4,424,150	-				+1.5
4,424,150	-				+0.5
4,424,150	-				+1.5
4,424,150	-				-1.8
4,424,150	-				+0.5
4,424,150	-				-0.1
4,424,150	-				-0.5
4,424,150	-				-1.3
4,424,150	-				-0.5
4,424,150	-				+0.3
4,424,150	-				-1.1
4,424,150	-				+1.5
4,424,150	-				+0.9
4,424,150	-				-0.5
4,424,150	-				+0.5
4,424,150	-				-0.1
4,424,150	-				-0.5
4,424,151	+				-0.4
4,424,151	+				-0.5
4,424,151	+				+1.7
4,424,151	+				-0.5
4,424,151	+				+2.5
4,424,151	+				-1.1
4,424,151	+				+2.3
4,424,151	+				-0.8
4,424,151	+				+0.5
4,424,151	+				-0.5
4,424,152	-				+0.5
4,424,152	-				-0.1
4,424,152	-				+0.5
4,424,152	-				+1.5
4,424,152	-				+2.5
4,424,327	+				+1.9
4,424,327	+				-0.2
4,424,328	-				-0.7
4,424,328	-				-0.8
4,424,469	+		Psest_4241	0.11	-0.1
4,424,469	+		Psest_4241	0.11	-0.5
4,424,469	+		Psest_4241	0.11	-0.2
4,424,469	+		Psest_4241	0.11	+1.5
4,424,470	-		Psest_4241	0.12	+1.7
4,424,523	+		Psest_4241	0.51	+0.1
4,424,523	+		Psest_4241	0.51	-0.8
4,424,524	-		Psest_4241	0.52	+0.9
4,424,524	-		Psest_4241	0.52	+0.5
4,424,544	+		Psest_4241	0.67	+0.6
4,424,586	+				-0.1
4,424,888	+		Psest_4242	0.23	+0.5
4,425,047	+		Psest_4242	0.37	-0.1
4,425,047	+		Psest_4242	0.37	+0.5
4,425,047	+		Psest_4242	0.37	-1.9
4,425,047	+		Psest_4242	0.37	-0.1
4,425,047	+		Psest_4242	0.37	+1.5
4,425,047	+		Psest_4242	0.37	+0.5
4,425,047	+		Psest_4242	0.37	+0.8
4,425,048	-		Psest_4242	0.37	-0.8
4,425,048	-		Psest_4242	0.37	+0.8
4,425,048	-		Psest_4242	0.37	-1.9
4,425,048	-		Psest_4242	0.37	-0.4
4,425,048	-		Psest_4242	0.37	-0.8
4,425,048	-		Psest_4242	0.37	-0.1
4,425,048	-		Psest_4242	0.37	+1.8
4,425,048	-		Psest_4242	0.37	-2.1
4,425,048	-		Psest_4242	0.37	-0.1
4,425,048	-		Psest_4242	0.37	-1.9
4,425,113	+		Psest_4242	0.42	+1.5
4,425,113	+		Psest_4242	0.42	+1.5
4,425,114	-		Psest_4242	0.42	+0.5
4,425,114	-		Psest_4242	0.42	-0.8
4,425,263	-		Psest_4242	0.55	-1.8
4,425,752	+				+1.7
4,425,752	+				+0.8
4,425,752	+				+2.1
4,425,752	+				+0.9
4,425,752	+				-0.6
4,425,752	+				-0.5
4,425,753	-				-0.1
4,425,753	-				+1.5
4,425,753	-				+3.1
4,425,753	-				+0.5
4,425,753	-				+1.5
4,425,753	-				+0.5
4,425,753	-				+0.5
4,425,753	-				-0.8
4,425,753	-				-1.5
4,425,753	-				-2.1
4,425,753	-				+1.5
4,425,753	-				-1.1
4,425,753	-				+0.9
4,425,753	-				+0.2
4,425,753	-				-0.8
4,425,753	-				+1.5
4,426,140	+		Psest_4243	0.68	-0.3
4,426,191	+		Psest_4243	0.79	+3.5
4,426,191	+		Psest_4243	0.79	-2.6
4,426,290	+				+0.8
4,426,290	+				-0.1
4,426,290	+				-0.2
4,426,290	+				+0.7
4,426,291	-				-1.1
4,426,291	-				+0.9
4,426,291	-				+1.5
4,426,291	-				-1.1
4,426,291	-				-1.5
4,426,367	+				+0.2
4,426,370	+				-0.1
4,426,371	-				-1.1
4,426,371	-				-1.5
4,426,371	-				-0.5
4,426,371	-				+3.7
4,426,371	-				+0.5
4,426,371	-				+1.1
4,426,371	-				-2.1
4,426,412	+				-0.3
4,426,412	+				-0.5
4,426,413	-				-1.5
4,426,413	-				+2.2
4,426,413	-				-1.1
4,426,413	-				-0.1
4,426,474	-		Psest_4244	0.13	+0.9
4,426,583	+		Psest_4244	0.22	-0.3
4,426,584	-		Psest_4244	0.22	+0.8
4,426,584	-		Psest_4244	0.22	-2.2
4,426,658	+		Psest_4244	0.27	-0.8
4,426,660	+		Psest_4244	0.27	-1.3
4,426,660	+		Psest_4244	0.27	+1.5
4,426,660	+		Psest_4244	0.27	+0.2
4,426,661	-		Psest_4244	0.27	-0.1
4,426,778	+		Psest_4244	0.36	-0.2
4,426,778	+		Psest_4244	0.36	+0.4
4,426,778	+		Psest_4244	0.36	-1.1
4,426,779	-		Psest_4244	0.36	+0.9
4,426,803	+		Psest_4244	0.38	-1.0
4,426,804	-		Psest_4244	0.38	+0.1