Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3343

Experiment: LB 30C timecourse2 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse2 timepoint 2
3,507,692	+				-1.2
3,507,692	+				-0.6
3,507,693	-				+1.0
3,507,693	-				-0.8
3,507,693	-				-1.0
3,507,729	+				-0.4
3,507,729	+				+0.5
3,507,729	+				-0.0
3,507,729	+				+0.3
3,507,729	+				+0.5
3,507,730	-				-0.1
3,507,730	-				-2.3
3,507,730	-				-0.9
3,507,730	-				-1.7
3,507,730	-				+3.5
3,507,730	-				-3.2
3,507,730	-				-0.5
3,507,730	-				-2.5
3,507,730	-				+0.4
3,507,730	-				+0.6
3,507,765	+				+0.2
3,507,765	+				-1.3
3,507,765	+				-0.6
3,507,765	+				+0.1
3,507,765	+				-1.4
3,507,765	+				+0.1
3,507,765	+				-0.1
3,507,765	+				-1.8
3,507,765	+				+0.2
3,507,765	+				-0.2
3,507,765	+				+3.2
3,507,765	+				+0.1
3,507,765	+				+0.1
3,507,766	-				-1.8
3,507,766	-				+0.8
3,507,766	-				-0.9
3,507,766	-				-0.5
3,507,766	-				+1.7
3,507,766	-				+0.9
3,507,766	-				+1.1
3,507,766	-				-1.1
3,507,766	-				+0.2
3,507,766	-				-1.1
3,507,768	+				-1.1
3,507,768	+				-0.1
3,507,768	+				-0.4
3,507,768	+				+1.6
3,507,768	+				-1.7
3,507,769	-				+0.5
3,507,769	-				+0.1
3,507,769	-				+0.2
3,507,769	-				-1.3
3,507,769	-				+1.7
3,507,769	-				+0.4
3,507,769	-				+0.8
3,507,807	+				-1.5
3,507,807	+				-0.6
3,507,807	+				-1.4
3,507,808	-				-1.8
3,507,808	-				-1.7
3,507,808	-				+0.1
3,507,808	-				-1.3
3,507,808	-				-0.2
3,507,808	-				+0.8
3,507,831	-				-0.4
3,507,885	+				-0.6
3,507,885	+				+0.7
3,507,894	-				-0.7
3,507,899	+				-0.4
3,507,900	-				-0.5
3,507,900	-				+0.9
3,507,900	-				-0.5
3,507,900	-				+0.4
3,507,949	+				+0.6
3,507,950	-				+1.0
3,507,950	-				+0.3
3,507,950	-				-0.2
3,507,950	-				+0.9
3,507,969	-				+0.1
3,507,969	-				-2.9
3,508,227	+		Psest_3342	0.30	+0.5
3,508,227	+		Psest_3342	0.30	-0.7
3,508,227	+		Psest_3342	0.30	+0.8
3,508,228	-		Psest_3342	0.30	-0.3
3,508,228	-		Psest_3342	0.30	+0.8
3,508,228	-		Psest_3342	0.30	+0.4
3,508,228	-		Psest_3342	0.30	+0.3
3,508,228	-		Psest_3342	0.30	+0.1
3,508,340	+		Psest_3342	0.49	+0.6
3,508,340	+		Psest_3342	0.49	+0.7
3,508,341	-		Psest_3342	0.49	-1.6
3,508,341	-		Psest_3342	0.49	+0.1
3,508,341	-		Psest_3342	0.49	-0.9
3,508,341	-		Psest_3342	0.49	-0.3
3,508,341	-		Psest_3342	0.49	+0.5
3,508,341	-		Psest_3342	0.49	+0.9
3,508,341	-		Psest_3342	0.49	-1.9
3,508,410	-		Psest_3342	0.61	+0.1
3,508,410	-		Psest_3342	0.61	-0.3
3,508,440	-		Psest_3342	0.66	-0.6
3,508,577	-		Psest_3342	0.89	+1.9
3,508,577	-		Psest_3342	0.89	-1.2
3,508,605	+				+0.7
3,508,605	+				-0.6
3,508,606	-				-0.2
3,508,657	+				+1.0
3,508,701	-				-0.3
3,508,766	+		Psest_3343	0.22	-2.7
3,508,766	+		Psest_3343	0.22	-0.5
3,508,767	-		Psest_3343	0.23	-2.5
3,508,767	-		Psest_3343	0.23	-1.1
3,508,767	-		Psest_3343	0.23	-0.5
3,508,767	-		Psest_3343	0.23	-0.5
3,508,767	-		Psest_3343	0.23	-2.1
3,508,767	-		Psest_3343	0.23	-0.9
3,508,826	+		Psest_3343	0.34	+0.8
3,509,333	-		Psest_3344	0.18	+1.0
3,509,345	+		Psest_3344	0.19	+0.3
3,509,499	+		Psest_3344	0.37	+3.7
3,509,511	-		Psest_3344	0.38	-0.3
3,509,511	-		Psest_3344	0.38	-0.1
3,509,533	+		Psest_3344	0.41	-0.7
3,509,533	+		Psest_3344	0.41	-0.9
3,509,533	+		Psest_3344	0.41	-0.7
3,509,533	+		Psest_3344	0.41	-0.6
3,509,533	+		Psest_3344	0.41	-0.3
3,509,534	-		Psest_3344	0.41	-1.1
3,509,534	-		Psest_3344	0.41	+0.4
3,509,534	-		Psest_3344	0.41	+1.1
3,509,534	-		Psest_3344	0.41	-2.8
3,509,534	-		Psest_3344	0.41	-1.7
3,509,534	-		Psest_3344	0.41	+1.7
3,509,720	+		Psest_3344	0.62	+0.5
3,509,720	+		Psest_3344	0.62	+1.3
3,509,720	+		Psest_3344	0.62	+1.7
3,509,721	-		Psest_3344	0.62	+1.9
3,509,721	-		Psest_3344	0.62	+1.3
3,509,721	-		Psest_3344	0.62	+0.9
3,509,950	+		Psest_3344	0.88	+0.4
3,509,950	+		Psest_3344	0.88	+0.5
3,509,951	-		Psest_3344	0.88	-0.3
3,509,951	-		Psest_3344	0.88	-0.4
3,509,951	-		Psest_3344	0.88	-1.9
3,509,951	-		Psest_3344	0.88	+0.2
3,509,951	-		Psest_3344	0.88	-0.5
3,509,951	-		Psest_3344	0.88	+0.9
3,509,951	-		Psest_3344	0.88	+1.7
3,510,019	+				-2.9
3,510,020	-				-2.2
3,510,055	+				+0.7