Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3100

Experiment: LB 30C timecourse2 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse2 timepoint 2
3,278,467	-				+2.9
3,278,467	-				+3.2
3,278,467	-				+3.9
3,278,467	-				+3.4
3,278,467	-				+3.4
3,278,471	-				+3.3
3,278,471	-				+3.7
3,278,471	-				+3.5
3,278,551	-		Psest_3100	0.20	+3.7
3,278,551	-		Psest_3100	0.20	+3.7
3,278,551	-		Psest_3100	0.20	+3.5
3,278,551	-		Psest_3100	0.20	+3.2
3,278,551	-		Psest_3100	0.20	+4.0
3,278,576	-		Psest_3100	0.24	+3.9
3,278,576	-		Psest_3100	0.24	+3.6
3,278,584	-		Psest_3100	0.26	+3.1
3,278,697	-		Psest_3100	0.45	+3.6
3,278,697	-		Psest_3100	0.45	+3.3
3,278,773	-		Psest_3100	0.58	+3.8
3,278,800	-		Psest_3100	0.63	+4.0
3,278,800	-		Psest_3100	0.63	+3.4
3,278,802	-		Psest_3100	0.63	+3.2
3,278,802	-		Psest_3100	0.63	+3.6
3,278,841	-		Psest_3100	0.70	+4.1
3,278,849	-		Psest_3100	0.71	+3.8
3,278,849	-		Psest_3100	0.71	+3.3
3,278,849	-		Psest_3100	0.71	+3.2
3,278,931	-		Psest_3100	0.85	+3.8
3,279,077	-				+3.5
3,279,112	-				+0.9
3,279,130	-				-0.4
3,279,242	-				+1.5
3,279,297	-				-0.4
3,279,297	-				+1.3
3,279,309	-				-0.6
3,279,330	+				+2.9
3,279,331	-				-2.0
3,279,331	-				+0.7
3,279,332	+				+0.4
3,279,332	+				-1.1
3,279,333	-				-0.3
3,279,333	-				+1.3
3,279,333	-				+1.0
3,279,333	-				+1.7
3,279,333	-				-0.3
3,279,333	-				+0.5
3,279,333	-				+0.6
3,279,333	-				-2.4
3,279,333	-				+0.7
3,279,334	+				+0.9
3,279,335	-				+0.6
3,279,335	-				+0.1
3,279,335	-				+0.5
3,279,335	-				+0.1
3,279,335	-				-1.1
3,279,335	-				-0.6
3,279,335	-				-0.6
3,279,335	-				-0.8
3,279,335	-				+0.7
3,279,335	-				-0.0
3,279,335	-				-1.0
3,279,335	-				+0.3
3,279,335	-				-1.9
3,279,335	-				-0.9
3,279,335	-				-1.7
3,279,335	-				+1.5
3,279,335	-				-0.3
3,279,335	-				-2.0
3,279,335	-				+0.9
3,279,335	-				+0.6
3,279,335	-				+0.1
3,279,338	-				-0.6
3,279,338	-				+0.1
3,279,338	-				-1.9
3,279,378	+				-2.4
3,279,378	+				+0.5
3,279,379	-				+0.4
3,279,379	-				+0.7
3,279,379	-				-0.9
3,279,379	-				+1.2
3,279,390	+				-2.3
3,279,390	+				-0.1
3,279,390	+				-0.6
3,279,391	-				-0.1
3,279,498	-				-0.7
3,279,740	-		Psest_3101	0.23	-0.5
3,279,911	+		Psest_3101	0.34	+1.2
3,279,911	+		Psest_3101	0.34	+0.1
3,279,912	-		Psest_3101	0.34	-2.2
3,279,912	-		Psest_3101	0.34	-1.2
3,279,912	-		Psest_3101	0.34	+0.9
3,279,912	-		Psest_3101	0.34	+0.7
3,279,912	-		Psest_3101	0.34	+0.2
3,279,912	-		Psest_3101	0.34	-1.4
3,279,912	-		Psest_3101	0.34	-0.9
3,279,912	-		Psest_3101	0.34	+0.3
3,279,912	-		Psest_3101	0.34	-3.0
3,279,912	-		Psest_3101	0.34	-1.4
3,279,912	-		Psest_3101	0.34	+0.5
3,279,912	-		Psest_3101	0.34	-1.2
3,279,996	-		Psest_3101	0.39	+0.3
3,279,996	-		Psest_3101	0.39	+0.2
3,279,996	-		Psest_3101	0.39	-0.1