Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2651

Experiment: LB 30C timecourse2 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse2 timepoint 2
2,831,284	+		Psest_2649	0.72	+1.7
2,831,284	+		Psest_2649	0.72	+1.5
2,831,336	-		Psest_2649	0.78	-1.2
2,831,361	+		Psest_2649	0.81	+0.1
2,831,363	+		Psest_2649	0.82	+0.1
2,831,364	-		Psest_2649	0.82	-1.5
2,831,364	-		Psest_2649	0.82	+0.6
2,831,420	+		Psest_2649	0.88	+1.0
2,831,565	-				-0.3
2,831,565	-				-0.3
2,831,718	+		Psest_2650	0.35	-3.0
2,831,718	+		Psest_2650	0.35	+0.8
2,831,719	-		Psest_2650	0.36	-2.8
2,831,719	-		Psest_2650	0.36	-0.3
2,831,726	-		Psest_2650	0.37	-0.1
2,832,036	+				-2.3
2,832,036	+				+0.6
2,832,282	+				-2.1
2,832,367	-				-0.4
2,832,489	+		Psest_2651	0.11	-0.9
2,832,489	+		Psest_2651	0.11	-3.3
2,832,489	+		Psest_2651	0.11	-0.4
2,832,489	+		Psest_2651	0.11	-0.7
2,832,489	+		Psest_2651	0.11	-1.7
2,832,489	+		Psest_2651	0.11	-0.7
2,832,489	+		Psest_2651	0.11	-2.4
2,832,490	-		Psest_2651	0.11	-1.2
2,832,490	-		Psest_2651	0.11	+1.6
2,832,490	-		Psest_2651	0.11	-0.9
2,832,490	-		Psest_2651	0.11	-0.7
2,832,490	-		Psest_2651	0.11	-2.1
2,832,490	-		Psest_2651	0.11	-3.4
2,832,490	-		Psest_2651	0.11	-2.4
2,832,490	-		Psest_2651	0.11	-0.9
2,834,823	-				-0.9
2,835,009	+				-1.7
2,835,010	-				+0.6
2,835,010	-				-1.3
2,835,033	-				-2.3
2,835,033	-				-0.6
2,835,033	-				-0.6
2,835,033	-				-0.7
2,835,034	+				-0.2
2,835,034	+				-0.9
2,835,034	+				-1.5
2,835,034	+				+0.3
2,835,034	+				-2.1
2,835,034	+				-0.2
2,835,034	+				+3.1
2,835,034	+				-1.3
2,835,034	+				-2.1
2,835,034	+				-1.2
2,835,034	+				-2.8
2,835,034	+				-2.9
2,835,035	-				-1.5
2,835,035	-				+0.8
2,835,035	-				-0.0
2,835,035	-				-0.9
2,835,035	-				-0.2
2,835,035	-				+0.3
2,835,035	-				+1.9
2,835,035	-				-0.4
2,835,035	-				-0.6
2,835,035	-				+1.6
2,835,035	-				+1.3
2,835,035	-				-0.9
2,835,035	-				-0.2
2,835,035	-				-0.2
2,835,035	-				+0.1
2,835,035	-				+0.5
2,835,035	-				-2.0
2,835,035	-				-0.1
2,835,035	-				-3.6
2,835,035	-				-0.9
2,835,035	-				-0.4
2,835,035	-				-1.1
2,835,035	-				-0.9
2,835,035	-				+0.5
2,835,035	-				+0.1
2,835,035	-				+0.9
2,835,035	-				-1.3
2,835,035	-				-0.7
2,835,035	-				+0.2
2,835,036	+				-2.4
2,835,036	+				-1.2
2,835,036	+				-0.9
2,835,036	+				-1.5
2,835,036	+				+0.1
2,835,036	+				+0.1
2,835,036	+				-1.4
2,835,036	+				-3.2
2,835,036	+				-3.4
2,835,036	+				-2.5
2,835,036	+				-0.3
2,835,036	+				-1.7
2,835,036	+				-3.0
2,835,036	+				+0.2
2,835,036	+				-2.9
2,835,036	+				+0.2
2,835,036	+				-2.2
2,835,036	+				-2.4
2,835,036	+				-0.9
2,835,036	+				+0.3
2,835,036	+				-1.6
2,835,037	-				-0.9
2,835,037	-				-0.5
2,835,037	-				+0.5
2,835,037	-				+0.8
2,835,037	-				-0.4
2,835,037	-				-0.4
2,835,037	-				-0.5
2,835,037	-				+0.1
2,835,037	-				+0.1
2,835,037	-				-1.3
2,835,037	-				-0.6
2,835,037	-				-1.1
2,835,037	-				-2.4
2,835,037	-				-0.3
2,835,037	-				+2.2
2,835,037	-				-1.4
2,835,037	-				-1.9
2,835,037	-				+0.9
2,835,037	-				-1.1
2,835,037	-				-1.8
2,835,037	-				-2.1
2,835,037	-				+0.5
2,835,037	-				+2.3
2,835,037	-				+0.9
2,835,038	+				-0.9
2,835,038	+				-2.2
2,835,039	-				+1.3
2,835,039	-				-0.9
2,835,039	-				+0.6
2,835,039	-				+0.8
2,835,039	-				+0.6
2,835,039	-				+0.2
2,835,211	-		Psest_2652	0.52	-0.0
2,835,223	-		Psest_2652	0.57	+0.3
2,835,223	-		Psest_2652	0.57	+1.7
2,835,291	+		Psest_2652	0.86	-1.7
2,835,291	+		Psest_2652	0.86	-1.0
2,835,291	+		Psest_2652	0.86	-0.8
2,835,291	+		Psest_2652	0.86	+0.9
2,835,292	-		Psest_2652	0.87	-2.4
2,835,292	-		Psest_2652	0.87	+1.1
2,835,396	+				-0.7
2,835,396	+				+0.6
2,835,397	-				-0.6