Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2241

Experiment: LB 30C timecourse2 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse2 timepoint 2
2,391,664	-		Psest_2239	0.43	+0.6
2,391,664	-		Psest_2239	0.43	+0.5
2,391,720	+		Psest_2239	0.52	-2.9
2,391,720	+		Psest_2239	0.52	+0.6
2,391,837	+		Psest_2239	0.69	+0.7
2,391,852	+		Psest_2239	0.71	+0.2
2,392,106	-				-0.2
2,392,106	-				+0.2
2,392,248	+		Psest_2240	0.33	+2.0
2,392,249	-		Psest_2240	0.33	+0.6
2,392,249	-		Psest_2240	0.33	-0.6
2,392,366	+				-2.0
2,392,366	+				+0.4
2,392,370	+				+0.1
2,392,371	-				-0.0
2,392,371	-				+0.4
2,392,455	+				-0.9
2,392,455	+				-0.8
2,392,558	-				+1.3
2,392,640	+		Psest_2241	0.11	+1.4
2,392,641	-		Psest_2241	0.11	+1.3
2,392,761	+		Psest_2241	0.21	-1.2
2,392,762	-		Psest_2241	0.21	-2.2
2,392,762	-		Psest_2241	0.21	-0.7
2,392,784	+		Psest_2241	0.22	-2.6
2,392,784	+		Psest_2241	0.22	-0.0
2,392,785	-		Psest_2241	0.23	+0.8
2,392,912	-		Psest_2241	0.33	-1.2
2,393,021	+		Psest_2241	0.41	+0.7
2,393,022	-		Psest_2241	0.41	+1.2
2,393,027	+		Psest_2241	0.42	+0.8
2,393,027	+		Psest_2241	0.42	-0.4
2,393,165	+		Psest_2241	0.53	+0.4
2,393,165	+		Psest_2241	0.53	-0.7
2,393,166	-		Psest_2241	0.53	+2.0
2,393,171	+		Psest_2241	0.53	+0.8
2,393,171	+		Psest_2241	0.53	+0.3
2,393,172	-		Psest_2241	0.53	-0.6
2,393,274	+		Psest_2241	0.62	-2.3
2,393,274	+		Psest_2241	0.62	-1.9
2,393,274	+		Psest_2241	0.62	-0.9
2,393,274	+		Psest_2241	0.62	+1.2
2,393,275	-		Psest_2241	0.62	-0.7
2,393,275	-		Psest_2241	0.62	-1.2
2,393,279	+		Psest_2241	0.62	+0.4
2,393,291	+		Psest_2241	0.63	+0.9
2,393,292	-		Psest_2241	0.63	-0.4
2,393,342	+		Psest_2241	0.67	-2.1
2,393,342	+		Psest_2241	0.67	+0.8
2,393,343	-		Psest_2241	0.67	-0.4
2,393,343	-		Psest_2241	0.67	+2.4
2,393,345	+		Psest_2241	0.67	+0.8
2,393,682	-				-0.0
2,393,691	-				-0.6
2,393,744	+				+1.1
2,393,745	-				-0.5
2,393,745	-				-0.7
2,393,745	-				+0.7
2,393,750	+				+0.3
2,393,750	+				+1.3
2,393,750	+				-1.8
2,393,751	-				-0.2
2,393,751	-				-1.4
2,393,751	-				+0.1
2,393,878	-				+0.7
2,393,940	+		Psest_2242	0.12	+0.3
2,393,940	+		Psest_2242	0.12	-2.2
2,393,940	+		Psest_2242	0.12	-1.2
2,393,940	+		Psest_2242	0.12	-0.4
2,393,940	+		Psest_2242	0.12	+0.1
2,393,940	+		Psest_2242	0.12	-0.0
2,393,940	+		Psest_2242	0.12	+1.2
2,393,940	+		Psest_2242	0.12	-1.0
2,393,940	+		Psest_2242	0.12	+1.0
2,393,940	+		Psest_2242	0.12	+0.6
2,393,940	+		Psest_2242	0.12	+1.0
2,393,940	+		Psest_2242	0.12	+1.0
2,393,940	+		Psest_2242	0.12	-1.9
2,393,940	+		Psest_2242	0.12	+0.6
2,393,940	+		Psest_2242	0.12	+1.6
2,393,940	+		Psest_2242	0.12	-0.9
2,393,940	+		Psest_2242	0.12	+1.4
2,393,940	+		Psest_2242	0.12	+0.6
2,393,940	+		Psest_2242	0.12	-0.4
2,393,941	-		Psest_2242	0.13	+1.1
2,393,941	-		Psest_2242	0.13	+0.6
2,393,941	-		Psest_2242	0.13	-1.5
2,393,941	-		Psest_2242	0.13	+1.0
2,393,941	-		Psest_2242	0.13	+0.7
2,393,941	-		Psest_2242	0.13	-0.3
2,393,941	-		Psest_2242	0.13	-3.5
2,393,941	-		Psest_2242	0.13	+1.4
2,393,941	-		Psest_2242	0.13	+0.5
2,393,941	-		Psest_2242	0.13	-1.1
2,393,941	-		Psest_2242	0.13	-1.0
2,393,941	-		Psest_2242	0.13	-0.5
2,393,941	-		Psest_2242	0.13	+0.9
2,393,941	-		Psest_2242	0.13	-0.9
2,393,941	-		Psest_2242	0.13	+0.3
2,393,943	+		Psest_2242	0.13	-1.5
2,393,944	-		Psest_2242	0.13	+0.1
2,393,944	-		Psest_2242	0.13	-0.4
2,393,982	+		Psest_2242	0.16	-0.5
2,393,998	-		Psest_2242	0.17	-3.0
2,393,998	-		Psest_2242	0.17	-0.9
2,393,998	-		Psest_2242	0.17	+0.4
2,394,001	+		Psest_2242	0.17	+0.3
2,394,001	+		Psest_2242	0.17	-0.7
2,394,001	+		Psest_2242	0.17	+0.1
2,394,002	-		Psest_2242	0.18	+0.6
2,394,002	-		Psest_2242	0.18	+1.4
2,394,002	-		Psest_2242	0.18	-0.0
2,394,002	-		Psest_2242	0.18	-2.1
2,394,002	-		Psest_2242	0.18	-0.0
2,394,038	+		Psest_2242	0.20	+1.3
2,394,039	-		Psest_2242	0.21	+1.0
2,394,039	-		Psest_2242	0.21	+0.1
2,394,282	+		Psest_2242	0.41	+1.0
2,394,332	+		Psest_2242	0.45	+1.2
2,394,333	-		Psest_2242	0.45	+0.4
2,394,582	+		Psest_2242	0.65	-1.2
2,394,583	-		Psest_2242	0.65	+1.1
2,394,583	-		Psest_2242	0.65	-1.7
2,394,583	-		Psest_2242	0.65	+0.3
2,394,583	-		Psest_2242	0.65	+0.1
2,394,608	+		Psest_2242	0.67	-0.7
2,394,608	+		Psest_2242	0.67	-0.4