Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1922

Experiment: LB 30C timecourse2 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse2 timepoint 2
2,028,041	+		Psest_1921	0.40	+0.4
2,028,041	+		Psest_1921	0.40	+0.9
2,028,041	+		Psest_1921	0.40	+0.1
2,028,041	+		Psest_1921	0.40	-2.0
2,028,041	+		Psest_1921	0.40	+0.2
2,028,042	-		Psest_1921	0.40	-1.1
2,028,042	-		Psest_1921	0.40	-0.3
2,028,229	+		Psest_1921	0.62	-0.6
2,028,230	-		Psest_1921	0.62	+1.2
2,028,497	-				+0.1
2,028,701	+				-0.0
2,028,702	-				+1.7
2,028,702	-				+0.1
2,028,702	-				+1.6
2,028,790	-				+1.8
2,028,861	-				-0.6
2,029,062	-				+0.1
2,029,229	+		Psest_1922	0.15	-0.3
2,029,229	+		Psest_1922	0.15	-1.5
2,029,229	+		Psest_1922	0.15	-0.6
2,029,229	+		Psest_1922	0.15	+1.0
2,029,229	+		Psest_1922	0.15	+0.7
2,029,230	-		Psest_1922	0.15	-2.6
2,029,230	-		Psest_1922	0.15	-2.2
2,029,230	-		Psest_1922	0.15	+0.6
2,029,230	-		Psest_1922	0.15	-1.6
2,029,230	-		Psest_1922	0.15	-0.8
2,029,230	-		Psest_1922	0.15	+1.7
2,029,230	-		Psest_1922	0.15	-2.3
2,029,230	-		Psest_1922	0.15	-2.8
2,029,230	-		Psest_1922	0.15	-0.6
2,029,230	-		Psest_1922	0.15	-2.7
2,029,232	+		Psest_1922	0.15	-1.6
2,029,232	+		Psest_1922	0.15	-3.1
2,029,233	-		Psest_1922	0.15	+1.9
2,029,233	-		Psest_1922	0.15	-1.1
2,029,394	+		Psest_1922	0.22	-2.0
2,029,394	+		Psest_1922	0.22	-0.9
2,029,481	+		Psest_1922	0.25	-1.7
2,029,482	-		Psest_1922	0.25	-0.9
2,029,482	-		Psest_1922	0.25	-1.5
2,029,482	-		Psest_1922	0.25	+1.7
2,029,648	+		Psest_1922	0.31	-1.8
2,029,649	-		Psest_1922	0.31	-0.3
2,029,649	-		Psest_1922	0.31	+2.1
2,029,737	-		Psest_1922	0.34	-0.3
2,029,881	-		Psest_1922	0.40	+0.4
2,029,967	+		Psest_1922	0.43	+0.7
2,029,967	+		Psest_1922	0.43	+0.6
2,029,982	+		Psest_1922	0.44	+0.3
2,030,060	+		Psest_1922	0.47	+1.3
2,030,061	-		Psest_1922	0.47	-0.9
2,030,201	+		Psest_1922	0.52	-1.6
2,030,222	+		Psest_1922	0.53	-1.5
2,030,223	-		Psest_1922	0.53	-0.7
2,030,223	-		Psest_1922	0.53	-0.3
2,030,867	+		Psest_1922	0.77	-0.3
2,031,123	+		Psest_1922	0.87	-2.7
2,031,694	-				+0.4
2,031,694	-				+0.9
2,031,733	-				+1.2
2,031,774	+				-0.6
2,031,774	+				-0.5
2,031,775	-				+1.4
2,031,775	-				+1.6
2,031,775	-				+2.2
2,031,778	-				+0.6
2,031,778	-				+0.1
2,031,784	-				+1.7
2,031,784	-				+0.8
2,031,792	+				+0.4
2,031,793	-				-0.1
2,031,793	-				+0.4
2,031,793	-				+1.6
2,031,796	+				-1.2
2,031,796	+				-0.9
2,031,796	+				+0.1
2,031,796	+				-1.8
2,031,796	+				+0.9
2,031,796	+				+1.3
2,031,796	+				-0.9
2,031,796	+				+0.4
2,031,797	-				+2.2
2,031,797	-				+2.3
2,031,797	-				+2.5
2,031,797	-				+2.4
2,031,797	-				+1.5
2,031,797	-				+2.4
2,031,797	-				+3.3
2,031,797	-				+2.0
2,031,797	-				+3.0
2,031,797	-				+2.1
2,031,797	-				+3.0
2,031,825	+				+1.1
2,032,073	+		Psest_1923	0.25	+3.0
2,032,192	-		Psest_1923	0.36	+2.8
2,032,198	+		Psest_1923	0.37	+3.5
2,032,232	+		Psest_1923	0.40	+3.4
2,032,282	+		Psest_1923	0.44	+2.0