Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1184

Experiment: LB 30C timecourse2 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse2 timepoint 2
1,285,742	+		Psest_1182	0.50	+0.6
1,285,742	+		Psest_1182	0.50	-1.5
1,285,742	+		Psest_1182	0.50	+2.6
1,285,742	+		Psest_1182	0.50	-0.3
1,285,742	+		Psest_1182	0.50	-0.4
1,285,743	-		Psest_1182	0.50	-2.1
1,285,743	-		Psest_1182	0.50	+0.6
1,285,743	-		Psest_1182	0.50	-1.3
1,285,743	-		Psest_1182	0.50	+0.0
1,285,743	-		Psest_1182	0.50	-1.7
1,285,743	-		Psest_1182	0.50	+0.5
1,286,067	-		Psest_1182	0.86	+0.2
1,286,067	-		Psest_1182	0.86	-0.6
1,286,081	+		Psest_1182	0.87	-0.4
1,286,115	-				-0.3
1,286,162	+				+0.0
1,286,162	+				+1.0
1,286,162	+				+0.6
1,286,162	+				-0.6
1,286,162	+				-1.4
1,286,162	+				+0.6
1,286,163	-				-1.3
1,286,163	-				-2.8
1,286,163	-				-0.1
1,286,163	-				+0.3
1,286,361	-		Psest_1183	0.39	+0.1
1,286,364	+		Psest_1183	0.40	-0.4
1,286,365	-		Psest_1183	0.40	-2.5
1,286,365	-		Psest_1183	0.40	-2.5
1,286,599	+				+0.6
1,286,599	+				+0.5
1,286,600	-				-2.8
1,286,600	-				+0.2
1,287,089	+		Psest_1184	0.86	+0.2
1,287,089	+		Psest_1184	0.86	+1.6
1,287,089	+		Psest_1184	0.86	+1.6
1,287,089	+		Psest_1184	0.86	+0.1
1,287,089	+		Psest_1184	0.86	+0.0
1,287,089	+		Psest_1184	0.86	-1.2
1,287,089	+		Psest_1184	0.86	+0.3
1,287,089	+		Psest_1184	0.86	-1.2
1,287,090	-		Psest_1184	0.86	+0.6
1,287,090	-		Psest_1184	0.86	-0.7
1,287,090	-		Psest_1184	0.86	-0.4
1,287,206	+				-0.7
1,287,206	+				-1.0
1,287,207	-				+0.0
1,287,216	+				+0.7
1,287,216	+				+0.2
1,287,217	-				+1.0
1,287,248	+				+2.6
1,287,248	+				+1.0
1,287,248	+				+0.7
1,287,248	+				-0.4
1,287,248	+				-2.3
1,287,248	+				+0.0
1,287,248	+				-0.7
1,287,248	+				-1.0
1,287,248	+				+0.0
1,287,248	+				-0.9
1,287,249	-				+0.3
1,287,249	-				+1.0
1,287,249	-				+2.0
1,287,315	+				-0.5
1,287,315	+				+0.5
1,287,384	+		Psest_1185	0.16	+1.0
1,287,384	+		Psest_1185	0.16	+0.0
1,287,385	-		Psest_1185	0.17	+1.8
1,287,461	-		Psest_1185	0.28	-0.4
1,287,900	-				-0.0
1,287,924	+				+1.2
1,287,924	+				+0.4
1,287,924	+				-1.7
1,288,031	+				-1.9
1,288,032	-				+0.2
1,288,032	-				-1.2
1,288,032	-				+2.6
1,288,032	-				+1.0
1,288,032	-				-0.7
1,288,038	-				+1.4
1,288,038	-				-0.2
1,288,083	+		Psest_1186	0.10	+0.9
1,288,083	+		Psest_1186	0.10	-2.2
1,288,102	+		Psest_1186	0.12	+0.6
1,288,103	-		Psest_1186	0.12	+1.6
1,288,163	+		Psest_1186	0.16	+1.1
1,288,163	+		Psest_1186	0.16	-3.0