Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4236

Experiment: LB 30C timecourse2 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse2 timepoint 1
4,418,773	+		Psest_4235	0.72	-0.3
4,418,773	+		Psest_4235	0.72	+0.6
4,418,774	-		Psest_4235	0.72	-1.5
4,418,814	+		Psest_4235	0.74	+1.3
4,418,814	+		Psest_4235	0.74	-0.7
4,418,814	+		Psest_4235	0.74	+1.0
4,418,814	+		Psest_4235	0.74	-1.3
4,418,814	+		Psest_4235	0.74	+0.5
4,418,814	+		Psest_4235	0.74	+1.5
4,418,814	+		Psest_4235	0.74	+1.3
4,418,814	+		Psest_4235	0.74	+3.3
4,418,814	+		Psest_4235	0.74	-0.0
4,418,814	+		Psest_4235	0.74	+1.3
4,418,815	-		Psest_4235	0.74	-2.8
4,418,815	-		Psest_4235	0.74	-1.3
4,418,815	-		Psest_4235	0.74	-1.8
4,418,815	-		Psest_4235	0.74	+1.4
4,419,227	+				+0.3
4,419,227	+				-0.7
4,419,227	+				-1.0
4,419,228	-				+0.4
4,419,505	+				+0.3
4,419,506	-				-2.8
4,419,506	-				-0.7
4,419,559	-				+0.7
4,419,573	+				+1.3
4,419,662	+				+0.3
4,419,662	+				+0.3
4,419,662	+				+1.3
4,419,662	+				+0.3
4,419,662	+				-0.3
4,419,663	-				-1.0
4,419,667	+				+1.3
4,419,668	-				-0.7
4,419,668	-				-1.0
4,419,688	+				+0.3
4,419,688	+				+1.3
4,419,688	+				-1.5
4,419,688	+				+2.3
4,419,688	+				+2.3
4,419,770	+		Psest_4236	0.14	+0.1
4,419,770	+		Psest_4236	0.14	-0.1
4,419,770	+		Psest_4236	0.14	+1.0
4,419,771	-		Psest_4236	0.14	-0.1
4,419,771	-		Psest_4236	0.14	-1.0
4,419,771	-		Psest_4236	0.14	-0.3
4,419,771	-		Psest_4236	0.14	-0.4
4,419,777	+		Psest_4236	0.15	-0.3
4,419,777	+		Psest_4236	0.15	-0.7
4,419,777	+		Psest_4236	0.15	+2.9
4,419,777	+		Psest_4236	0.15	+1.3
4,419,777	+		Psest_4236	0.15	-0.5
4,419,778	-		Psest_4236	0.15	-0.6
4,419,778	-		Psest_4236	0.15	-0.8
4,419,778	-		Psest_4236	0.15	+2.3
4,419,780	+		Psest_4236	0.15	+1.3
4,419,780	+		Psest_4236	0.15	+0.8
4,419,780	+		Psest_4236	0.15	-0.3
4,419,781	-		Psest_4236	0.15	-1.3
4,419,791	+		Psest_4236	0.16	+1.3
4,419,791	+		Psest_4236	0.16	+1.3
4,419,792	-		Psest_4236	0.16	-0.9
4,419,792	-		Psest_4236	0.16	-0.7
4,419,792	-		Psest_4236	0.16	-1.9
4,420,313	+		Psest_4236	0.59	-1.3
4,420,314	-		Psest_4236	0.59	+0.3
4,420,467	+		Psest_4236	0.72	+0.3
4,420,467	+		Psest_4236	0.72	+0.7
4,420,767	+				+0.3
4,420,767	+				+0.0
4,420,768	-				+0.3
4,420,974	+				+0.7
4,420,974	+				+1.6
4,420,975	-				+2.3
4,420,975	-				+2.9
4,420,975	-				+0.3
4,420,975	-				+0.5
4,420,990	-				-1.0
4,421,004	+				+0.7
4,421,005	-				+0.9
4,421,005	-				+1.3
4,421,005	-				+0.3
4,421,101	-		Psest_4237	0.10	-0.7
4,421,149	-		Psest_4237	0.13	+1.3
4,421,149	-		Psest_4237	0.13	+1.0
4,421,154	+		Psest_4237	0.14	+0.3
4,421,154	+		Psest_4237	0.14	+0.9
4,421,155	-		Psest_4237	0.14	-0.9
4,421,155	-		Psest_4237	0.14	+0.8
4,421,155	-		Psest_4237	0.14	-0.1
4,421,155	-		Psest_4237	0.14	+0.3
4,421,304	+		Psest_4237	0.24	-1.9
4,421,304	+		Psest_4237	0.24	-0.7
4,421,305	-		Psest_4237	0.24	-0.1
4,421,305	-		Psest_4237	0.24	+1.3
4,421,375	-		Psest_4237	0.29	+1.3
4,421,375	-		Psest_4237	0.29	+1.3
4,421,499	+		Psest_4237	0.38	-0.7
4,421,499	+		Psest_4237	0.38	-0.3
4,421,499	+		Psest_4237	0.38	+0.7
4,421,499	+		Psest_4237	0.38	-0.7
4,421,500	-		Psest_4237	0.38	+2.3
4,421,500	-		Psest_4237	0.38	-2.4
4,421,517	+		Psest_4237	0.39	+0.3
4,421,517	+		Psest_4237	0.39	+0.4
4,421,517	+		Psest_4237	0.39	-1.5
4,421,517	+		Psest_4237	0.39	-0.8
4,421,517	+		Psest_4237	0.39	+0.0
4,421,517	+		Psest_4237	0.39	-0.0
4,421,517	+		Psest_4237	0.39	+0.3
4,421,517	+		Psest_4237	0.39	+0.3
4,421,517	+		Psest_4237	0.39	+0.5
4,421,517	+		Psest_4237	0.39	-1.3
4,421,517	+		Psest_4237	0.39	-1.3
4,421,517	+		Psest_4237	0.39	-0.1
4,421,517	+		Psest_4237	0.39	-0.0
4,421,517	+		Psest_4237	0.39	-2.4
4,421,517	+		Psest_4237	0.39	+0.1
4,421,517	+		Psest_4237	0.39	-0.5
4,421,517	+		Psest_4237	0.39	+1.4
4,421,517	+		Psest_4237	0.39	+1.0
4,421,517	+		Psest_4237	0.39	-1.5
4,421,517	+		Psest_4237	0.39	-0.7
4,421,518	-		Psest_4237	0.39	+1.5
4,421,518	-		Psest_4237	0.39	+1.3
4,421,518	-		Psest_4237	0.39	-0.0
4,421,518	-		Psest_4237	0.39	-0.3
4,421,518	-		Psest_4237	0.39	-3.1
4,421,518	-		Psest_4237	0.39	-1.5
4,421,518	-		Psest_4237	0.39	+1.3
4,421,518	-		Psest_4237	0.39	+0.8
4,421,518	-		Psest_4237	0.39	+1.0
4,421,518	-		Psest_4237	0.39	-0.3
4,421,518	-		Psest_4237	0.39	+0.3
4,421,518	-		Psest_4237	0.39	+0.4
4,421,518	-		Psest_4237	0.39	-0.3
4,421,518	-		Psest_4237	0.39	-1.2
4,421,518	-		Psest_4237	0.39	+0.4
4,421,518	-		Psest_4237	0.39	-0.3
4,421,518	-		Psest_4237	0.39	-0.3
4,421,518	-		Psest_4237	0.39	-0.6
4,421,518	-		Psest_4237	0.39	+0.7
4,421,560	-		Psest_4237	0.42	+0.8
4,421,560	-		Psest_4237	0.42	-1.0
4,421,726	+		Psest_4237	0.53	+1.3
4,421,727	-		Psest_4237	0.53	+1.3