Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2526

Experiment: LB 30C timecourse2 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse2 timepoint 1
2,705,638	+		Psest_2524	0.83	-0.2
2,705,638	+		Psest_2524	0.83	-1.2
2,705,639	-		Psest_2524	0.83	-1.7
2,705,812	+				+0.1
2,705,813	-				-0.7
2,705,887	+				-1.9
2,705,887	+				+0.5
2,705,888	-				-2.5
2,705,891	+				-0.3
2,706,071	+		Psest_2525	0.29	-0.5
2,706,071	+		Psest_2525	0.29	+0.6
2,706,071	+		Psest_2525	0.29	-1.1
2,706,149	+		Psest_2525	0.42	-1.3
2,706,149	+		Psest_2525	0.42	-2.7
2,706,149	+		Psest_2525	0.42	-2.7
2,706,149	+		Psest_2525	0.42	-1.2
2,706,149	+		Psest_2525	0.42	-0.3
2,706,206	-		Psest_2525	0.51	-2.4
2,706,465	-				-1.9
2,706,592	+				+0.2
2,706,592	+				-0.3
2,706,593	-				-2.0
2,706,619	+				-0.4
2,706,620	-				-0.6
2,706,620	-				+0.2
2,706,745	+		Psest_2526	0.16	+1.1
2,706,745	+		Psest_2526	0.16	+0.3
2,706,925	+		Psest_2526	0.35	+0.5
2,706,946	+		Psest_2526	0.37	-0.9
2,706,946	+		Psest_2526	0.37	-1.7
2,707,021	+		Psest_2526	0.45	-0.1
2,707,021	+		Psest_2526	0.45	-1.1
2,707,021	+		Psest_2526	0.45	+0.1
2,707,022	-		Psest_2526	0.45	-3.1
2,707,282	+		Psest_2526	0.73	+1.0
2,707,282	+		Psest_2526	0.73	-1.7
2,707,282	+		Psest_2526	0.73	-1.0
2,707,282	+		Psest_2526	0.73	-1.0
2,707,282	+		Psest_2526	0.73	-1.2
2,707,282	+		Psest_2526	0.73	+0.3
2,707,283	-		Psest_2526	0.73	-0.1
2,707,283	-		Psest_2526	0.73	-0.7
2,707,376	-		Psest_2526	0.83	-0.6
2,707,376	-		Psest_2526	0.83	+0.2
2,707,450	+				-2.6
2,707,450	+				-0.3
2,707,451	-				-0.0
2,707,486	+				+0.1
2,707,487	-				-1.5
2,707,492	+				+0.0
2,707,531	+				-2.0
2,707,532	-				-0.4
2,707,538	+				-0.5
2,707,658	+				-0.5
2,707,658	+				+0.9
2,707,658	+				-0.8
2,707,659	-				+0.3
2,707,659	-				+0.4
2,707,659	-				-0.0
2,707,689	-				-0.3
2,707,768	+				-0.6
2,707,835	-				+2.2
2,707,868	+				-0.6
2,707,898	+				+0.8
2,707,899	-				-0.3
2,707,899	-				+2.7
2,707,899	-				+1.9
2,707,899	-				+2.1
2,707,912	+				+1.4
2,707,912	+				+1.7
2,707,912	+				+0.6
2,707,912	+				-0.5
2,707,913	-				+1.1
2,707,913	-				+0.4
2,707,913	-				+1.3
2,707,913	-				+0.4
2,707,914	+				+0.5
2,707,914	+				-0.1
2,707,914	+				-0.4
2,707,914	+				-0.2
2,707,914	+				+0.4
2,707,915	-				+0.4
2,707,915	-				+0.6
2,707,915	-				+0.4
2,707,915	-				+0.4
2,707,918	+				+1.6
2,707,918	+				+0.0
2,707,918	+				+1.1
2,707,918	+				+1.0
2,707,918	+				+0.7
2,707,918	+				+0.9
2,707,918	+				+1.1
2,707,918	+				+1.6
2,707,918	+				+0.9
2,707,918	+				+0.9
2,707,919	-				-0.6
2,707,919	-				+0.7
2,707,919	-				+0.1
2,707,919	-				+0.3
2,707,919	-				+0.5
2,707,919	-				+0.1
2,707,919	-				+0.5
2,707,919	-				+2.4
2,707,921	-				-1.1
2,707,921	-				+1.1
2,707,921	-				-1.4
2,707,921	-				-0.4
2,708,122	+		Psest_2527	0.17	+2.1
2,708,122	+		Psest_2527	0.17	+0.4
2,708,122	+		Psest_2527	0.17	+0.7
2,708,123	-		Psest_2527	0.17	+1.1
2,708,123	-		Psest_2527	0.17	+0.7
2,708,123	-		Psest_2527	0.17	+0.4
2,708,123	-		Psest_2527	0.17	-0.5
2,708,308	+		Psest_2527	0.30	+0.6
2,708,309	-		Psest_2527	0.30	+0.9
2,708,309	-		Psest_2527	0.30	+0.5
2,708,359	+		Psest_2527	0.33	-0.1
2,708,359	+		Psest_2527	0.33	+1.1
2,708,359	+		Psest_2527	0.33	+0.4
2,708,359	+		Psest_2527	0.33	-0.5
2,708,359	+		Psest_2527	0.33	+0.6
2,708,359	+		Psest_2527	0.33	+0.9
2,708,359	+		Psest_2527	0.33	+2.1
2,708,359	+		Psest_2527	0.33	+1.8
2,708,359	+		Psest_2527	0.33	-1.1
2,708,359	+		Psest_2527	0.33	+1.4
2,708,359	+		Psest_2527	0.33	+0.8
2,708,359	+		Psest_2527	0.33	+0.4
2,708,360	-		Psest_2527	0.33	+0.2
2,708,360	-		Psest_2527	0.33	+0.3
2,708,360	-		Psest_2527	0.33	+0.7