Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2365 and HP15_2366 are separated by 298 nucleotides HP15_2366 and HP15_2367 overlap by 4 nucleotides
HP15_2365: HP15_2365 - protein containing signal transduction response regulator, receiver region domain, at 2,490,147 to 2,491,064
_2365
HP15_2366: HP15_2366 - transcriptional regulator, AraC family protein, at 2,491,363 to 2,492,388
_2366
HP15_2367: HP15_2367 - argininosuccinate synthase, at 2,492,385 to 2,493,611
_2367
Position (kb)
2491
2492
2493 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2490.456 kb on - strand, within HP15_2365 at 2490.511 kb on - strand, within HP15_2365 at 2490.605 kb on + strand, within HP15_2365 at 2490.648 kb on + strand, within HP15_2365 at 2490.684 kb on - strand, within HP15_2365 at 2490.716 kb on - strand, within HP15_2365 at 2490.771 kb on + strand, within HP15_2365 at 2490.771 kb on + strand, within HP15_2365 at 2490.958 kb on - strand, within HP15_2365 at 2490.972 kb on + strand, within HP15_2365 at 2491.154 kb on + strand at 2491.326 kb on - strand at 2491.476 kb on - strand, within HP15_2366 at 2491.508 kb on - strand, within HP15_2366 at 2491.605 kb on - strand, within HP15_2366 at 2491.624 kb on + strand, within HP15_2366 at 2491.634 kb on + strand, within HP15_2366 at 2491.669 kb on - strand, within HP15_2366 at 2491.833 kb on + strand, within HP15_2366 at 2491.979 kb on + strand, within HP15_2366 at 2492.027 kb on + strand, within HP15_2366 at 2492.041 kb on - strand, within HP15_2366 at 2492.178 kb on - strand, within HP15_2366 at 2492.291 kb on + strand at 2492.291 kb on + strand at 2492.291 kb on + strand at 2492.299 kb on - strand at 2492.380 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 2,490,456 - HP15_2365 0.34 +0.2 2,490,511 - HP15_2365 0.40 +0.2 2,490,605 + HP15_2365 0.50 +0.0 2,490,648 + HP15_2365 0.55 -0.6 2,490,684 - HP15_2365 0.58 -0.2 2,490,716 - HP15_2365 0.62 +0.1 2,490,771 + HP15_2365 0.68 -0.1 2,490,771 + HP15_2365 0.68 -0.1 2,490,958 - HP15_2365 0.88 -3.0 2,490,972 + HP15_2365 0.90 -1.1 2,491,154 + +0.1 2,491,326 - -0.3 2,491,476 - HP15_2366 0.11 +0.7 2,491,508 - HP15_2366 0.14 +0.2 2,491,605 - HP15_2366 0.24 -0.3 2,491,624 + HP15_2366 0.25 -0.5 2,491,634 + HP15_2366 0.26 -0.5 2,491,669 - HP15_2366 0.30 -0.8 2,491,833 + HP15_2366 0.46 -1.5 2,491,979 + HP15_2366 0.60 -0.3 2,492,027 + HP15_2366 0.65 -0.6 2,492,041 - HP15_2366 0.66 +0.3 2,492,178 - HP15_2366 0.79 +0.1 2,492,291 + -0.3 2,492,291 + -0.3 2,492,291 + -0.8 2,492,299 - +0.2 2,492,380 - -0.5
Or see this region's nucleotide sequence