Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1979

Experiment: LB 30C timecourse2 timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse2 timepoint 1
2,091,766	+		Psest_1978	0.70	+1.5
2,091,766	+		Psest_1978	0.70	+1.5
2,091,767	-		Psest_1978	0.70	+1.5
2,091,929	-		Psest_1978	0.75	-0.4
2,091,934	+		Psest_1978	0.75	+1.8
2,091,934	+		Psest_1978	0.75	+0.9
2,091,934	+		Psest_1978	0.75	+0.9
2,091,934	+		Psest_1978	0.75	-0.1
2,091,935	-		Psest_1978	0.75	+0.0
2,092,120	-		Psest_1978	0.81	-1.2
2,092,149	+		Psest_1978	0.82	+0.6
2,092,149	+		Psest_1978	0.82	+1.1
2,092,149	+		Psest_1978	0.82	+0.1
2,092,149	+		Psest_1978	0.82	-1.1
2,092,149	+		Psest_1978	0.82	-0.9
2,092,149	+		Psest_1978	0.82	-0.5
2,092,149	+		Psest_1978	0.82	+1.8
2,092,150	-		Psest_1978	0.82	+0.1
2,092,595	-				-1.2
2,092,595	-				+1.3
2,092,685	-				-0.7
2,092,785	+				+0.8
2,092,785	+				+0.9
2,092,786	-				-0.5
2,092,786	-				-0.5
2,092,910	+		Psest_1979	0.15	+1.0
2,092,911	-		Psest_1979	0.15	+0.3
2,092,911	-		Psest_1979	0.15	-3.0
2,093,812	-		Psest_1979	0.79	+0.5
2,093,814	+		Psest_1979	0.79	+1.5
2,093,814	+		Psest_1979	0.79	+1.2
2,093,835	+		Psest_1979	0.81	+1.7
2,093,835	+		Psest_1979	0.81	-0.1
2,093,836	-		Psest_1979	0.81	+1.0
2,094,117	-				+2.4
2,094,117	-				+1.0
2,094,293	-		Psest_1980	0.29	-1.3
2,094,344	-		Psest_1980	0.37	+0.9
2,094,544	+		Psest_1980	0.69	+1.7
2,094,545	-		Psest_1980	0.70	+0.9
2,094,545	-		Psest_1980	0.70	+1.6
2,094,545	-		Psest_1980	0.70	+1.1
2,094,749	+				+0.2
2,094,759	+				+0.8
2,094,760	-				-0.5
2,094,760	-				+2.8
2,094,895	-				+0.1
2,094,933	+				-0.2
2,094,978	+				+0.1
2,095,104	+				-2.8
2,095,104	+				-0.7
2,095,105	-				+0.5