Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1167
Experiment: LB 30C timecourse2 timepoint 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 30C timecourse2 timepoint 1 |
---|---|---|---|---|---|
remove | |||||
1,267,461 | - | -0.0 | |||
1,267,476 | + | -0.2 | |||
1,267,486 | + | -0.3 | |||
1,267,493 | - | +1.3 | |||
1,267,512 | + | +0.4 | |||
1,267,513 | - | -1.9 | |||
1,267,600 | + | Psest_1166 | 0.11 | -0.7 | |
1,268,115 | + | Psest_1166 | 0.69 | -0.2 | |
1,268,302 | - | Psest_1166 | 0.90 | -0.2 | |
1,268,319 | - | +0.0 | |||
1,268,424 | + | -0.2 | |||
1,268,424 | + | +0.4 | |||
1,268,438 | - | Psest_1167 | 0.14 | -2.5 | |
1,268,720 | + | +1.0 | |||
1,268,740 | - | +0.9 | |||
1,268,740 | - | -0.7 | |||
1,268,822 | + | -0.4 | |||
1,268,822 | + | +0.7 | |||
1,268,823 | - | -0.6 | |||
1,268,984 | - | +0.5 | |||
1,268,985 | + | +0.7 | |||
1,268,985 | + | +0.2 | |||
1,269,060 | - | -2.7 | |||
1,269,300 | + | Psest_1168 | 0.29 | -0.3 |
Or see this region's nucleotide sequence