Strain Fitness in Shewanella amazonensis SB2B around Sama_3611

Experiment: Minimal media, 20C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, 20C
4,249,635	+		Sama_3610	0.11	-0.6
4,249,635	+		Sama_3610	0.11	-0.9
4,249,635	+		Sama_3610	0.11	+0.0
4,249,635	+		Sama_3610	0.11	+0.1
4,249,636	-		Sama_3610	0.12	-1.4
4,249,636	-		Sama_3610	0.12	-1.4
4,249,638	+		Sama_3610	0.13	-0.1
4,249,638	+		Sama_3610	0.13	-0.9
4,249,639	-		Sama_3610	0.13	+0.7
4,249,733	+		Sama_3610	0.62	+0.3
4,249,734	-		Sama_3610	0.62	-0.4
4,249,807	+				+0.3
4,249,807	+				-0.3
4,249,864	+				-0.4
4,249,865	-				-0.5
4,249,865	-				-0.7
4,249,885	+				+0.2
4,249,886	-				-0.5
4,249,886	-				-0.5
4,249,897	-				-0.2
4,249,995	+				-0.5
4,250,031	+				-0.1
4,250,032	-				-0.3
4,250,107	+				+0.5
4,250,107	+				-0.5
4,250,107	+				+0.8
4,250,108	-				-0.3
4,250,108	-				-0.3
4,250,108	-				-0.8
4,250,108	-				-0.5
4,250,108	-				-1.1
4,250,169	-				-0.2
4,250,258	+				+0.4
4,250,275	-				+0.7
4,250,275	-				+1.5
4,250,275	-				-0.1
4,250,275	-				-1.5
4,250,307	+				+0.1
4,250,427	+				+0.5
4,250,427	+				-0.1
4,250,427	+				-0.6
4,250,509	+				-0.1
4,250,509	+				+0.4
4,250,510	-				-0.9
4,250,510	-				+0.1
4,250,577	+				-0.3
4,250,577	+				+0.4
4,250,577	+				+1.0
4,250,577	+				-0.0
4,250,577	+				-0.5
4,250,577	+				-0.3
4,250,577	+				+0.4
4,250,577	+				+1.8
4,250,577	+				-0.1
4,250,578	-				+0.1
4,250,578	-				-0.0
4,250,578	-				-0.0
4,250,578	-				-0.4
4,250,578	-				-1.0
4,250,578	-				+0.9
4,250,578	-				+0.6
4,250,581	+				+0.1
4,250,581	+				-0.4
4,250,581	+				+0.6
4,250,581	+				-0.0
4,250,582	-				-0.1
4,250,582	-				-0.9
4,250,582	-				+0.2
4,250,623	+				+0.0
4,250,623	+				+0.6
4,250,624	-				-0.4
4,250,624	-				-0.1
4,250,625	+				+1.0
4,250,625	+				+0.0
4,250,625	+				-0.1
4,250,625	+				+0.5
4,250,625	+				-0.8
4,250,626	-				-0.8
4,250,626	-				-0.9
4,250,626	-				-0.2
4,250,626	-				-1.3
4,250,626	-				-0.0
4,250,626	-				+1.2
4,250,626	-				+0.5
4,250,626	-				+0.0
4,250,626	-				+0.2
4,250,640	-				+0.2
4,250,672	+				+1.0
4,250,672	+				+0.7
4,250,694	+				+0.9
4,250,694	+				+1.0
4,250,695	-				+0.6
4,250,715	-				-0.3
4,250,727	+				-0.6
4,250,727	+				+1.0
4,250,727	+				+0.6
4,250,727	+				-1.5
4,250,727	+				-2.6
4,250,727	+				-2.1
4,250,727	+				-2.2
4,250,727	+				-1.4
4,250,728	-				-0.9
4,250,728	-				-0.1
4,250,728	-				-0.1
4,250,728	-				+0.2
4,250,728	-				-0.0
4,250,728	-				+1.0
4,250,728	-				+0.1
4,250,728	-				+0.0
4,250,728	-				+0.9
4,250,736	+		Sama_3611	0.11	-0.2
4,250,736	+		Sama_3611	0.11	-0.8
4,250,736	+		Sama_3611	0.11	+0.2
4,250,737	-		Sama_3611	0.11	-0.3
4,250,769	+		Sama_3611	0.14	+0.2
4,250,769	+		Sama_3611	0.14	-0.7
4,250,769	+		Sama_3611	0.14	-0.4
4,250,769	+		Sama_3611	0.14	+1.6
4,250,769	+		Sama_3611	0.14	+0.1
4,250,769	+		Sama_3611	0.14	+0.1
4,250,769	+		Sama_3611	0.14	+0.1
4,250,769	+		Sama_3611	0.14	+3.4
4,250,769	+		Sama_3611	0.14	-2.1
4,250,770	-		Sama_3611	0.14	+1.4
4,250,770	-		Sama_3611	0.14	-1.0
4,250,770	-		Sama_3611	0.14	+0.0
4,250,770	-		Sama_3611	0.14	+1.0
4,250,770	-		Sama_3611	0.14	-0.5
4,250,770	-		Sama_3611	0.14	-0.2
4,250,770	-		Sama_3611	0.14	-0.8
4,250,770	-		Sama_3611	0.14	-0.7
4,250,770	-		Sama_3611	0.14	+0.7
4,250,770	-		Sama_3611	0.14	-0.2
4,250,770	-		Sama_3611	0.14	-0.6
4,250,770	-		Sama_3611	0.14	-0.6
4,250,776	+		Sama_3611	0.14	-0.5
4,250,776	+		Sama_3611	0.14	-0.6
4,250,776	+		Sama_3611	0.14	+1.5
4,250,776	+		Sama_3611	0.14	-0.6
4,250,777	-		Sama_3611	0.15	+0.1
4,250,777	-		Sama_3611	0.15	+0.1
4,250,777	-		Sama_3611	0.15	-0.7
4,250,893	-		Sama_3611	0.26	+0.5
4,250,902	+		Sama_3611	0.27	+0.8
4,250,993	+		Sama_3611	0.36	+0.2
4,250,993	+		Sama_3611	0.36	-2.0
4,250,993	+		Sama_3611	0.36	-0.8
4,250,993	+		Sama_3611	0.36	-0.4
4,250,993	+		Sama_3611	0.36	-0.4
4,250,993	+		Sama_3611	0.36	-1.3
4,250,994	-		Sama_3611	0.36	+1.2
4,250,994	-		Sama_3611	0.36	-0.4
4,250,994	-		Sama_3611	0.36	-0.7
4,250,994	-		Sama_3611	0.36	-0.2
4,250,994	-		Sama_3611	0.36	+0.4
4,250,994	-		Sama_3611	0.36	-1.1
4,250,994	-		Sama_3611	0.36	-0.6
4,250,994	-		Sama_3611	0.36	-2.8
4,250,994	-		Sama_3611	0.36	-0.3
4,251,018	+		Sama_3611	0.38	+1.7
4,251,018	+		Sama_3611	0.38	-1.0
4,251,018	+		Sama_3611	0.38	-0.2
4,251,018	+		Sama_3611	0.38	-0.5
4,251,018	+		Sama_3611	0.38	-0.5
4,251,018	+		Sama_3611	0.38	+0.9
4,251,018	+		Sama_3611	0.38	-0.3
4,251,018	+		Sama_3611	0.38	-1.4
4,251,018	+		Sama_3611	0.38	-1.2
4,251,019	-		Sama_3611	0.38	+0.6
4,251,019	-		Sama_3611	0.38	-0.0
4,251,019	-		Sama_3611	0.38	+1.8
4,251,019	-		Sama_3611	0.38	+0.1
4,251,019	-		Sama_3611	0.38	+0.7
4,251,019	-		Sama_3611	0.38	+0.8
4,251,019	-		Sama_3611	0.38	-0.0
4,251,026	+		Sama_3611	0.39	-0.2
4,251,026	+		Sama_3611	0.39	+0.5
4,251,026	+		Sama_3611	0.39	+0.2
4,251,026	+		Sama_3611	0.39	-0.9
4,251,027	-		Sama_3611	0.39	+0.8
4,251,027	-		Sama_3611	0.39	-0.3
4,251,027	-		Sama_3611	0.39	-1.3
4,251,027	-		Sama_3611	0.39	+1.2
4,251,027	-		Sama_3611	0.39	+0.1
4,251,070	+		Sama_3611	0.43	-0.7
4,251,071	-		Sama_3611	0.43	-0.2
4,251,084	+		Sama_3611	0.45	-1.6
4,251,084	+		Sama_3611	0.45	+0.8
4,251,084	+		Sama_3611	0.45	+0.0
4,251,084	+		Sama_3611	0.45	-0.4
4,251,084	+		Sama_3611	0.45	+0.7
4,251,084	+		Sama_3611	0.45	-0.7
4,251,084	+		Sama_3611	0.45	-0.2
4,251,084	+		Sama_3611	0.45	+0.0
4,251,085	-		Sama_3611	0.45	+0.3
4,251,085	-		Sama_3611	0.45	-0.5
4,251,085	-		Sama_3611	0.45	-0.7
4,251,117	+		Sama_3611	0.48	-0.2
4,251,118	-		Sama_3611	0.48	+1.0
4,251,126	-		Sama_3611	0.49	-0.5
4,251,126	-		Sama_3611	0.49	-1.4
4,251,126	-		Sama_3611	0.49	-0.8
4,251,158	+		Sama_3611	0.52	-0.3
4,251,158	+		Sama_3611	0.52	+0.2
4,251,159	-		Sama_3611	0.52	+0.2
4,251,159	-		Sama_3611	0.52	-0.1
4,251,159	-		Sama_3611	0.52	-0.0
4,251,169	+		Sama_3611	0.53	-2.6
4,251,170	-		Sama_3611	0.53	+0.1
4,251,170	-		Sama_3611	0.53	-0.5
4,251,216	+		Sama_3611	0.58	+1.0
4,251,217	-		Sama_3611	0.58	-0.9
4,251,217	-		Sama_3611	0.58	-1.6
4,251,217	-		Sama_3611	0.58	-0.5
4,251,217	-		Sama_3611	0.58	-1.6
4,251,217	-		Sama_3611	0.58	-0.0
4,251,243	+		Sama_3611	0.60	-0.1
4,251,324	-		Sama_3611	0.68	-0.0
4,251,355	+		Sama_3611	0.71	-1.3
4,251,356	-		Sama_3611	0.71	+0.3
4,251,356	-		Sama_3611	0.71	-0.1
4,251,383	+		Sama_3611	0.74	+0.2
4,251,383	+		Sama_3611	0.74	-0.8
4,251,384	-		Sama_3611	0.74	+0.2
4,251,384	-		Sama_3611	0.74	+0.6
4,251,384	-		Sama_3611	0.74	-1.2
4,251,384	-		Sama_3611	0.74	-0.6
4,251,459	+		Sama_3611	0.82	-0.5
4,251,459	+		Sama_3611	0.82	-0.2
4,251,459	+		Sama_3611	0.82	-0.3
4,251,459	+		Sama_3611	0.82	+1.1
4,251,460	-		Sama_3611	0.82	+0.1
4,251,460	-		Sama_3611	0.82	+0.1
4,251,460	-		Sama_3611	0.82	-0.8
4,251,460	-		Sama_3611	0.82	-0.0
4,251,460	-		Sama_3611	0.82	+1.2
4,251,460	-		Sama_3611	0.82	+0.1
4,251,460	-		Sama_3611	0.82	-1.0
4,251,583	+				-0.7
4,251,584	-				-0.3
4,251,628	-				-0.3
4,251,628	-				-0.8
4,251,655	+				+0.2
4,251,655	+				+1.2
4,251,655	+				+0.0
4,251,655	+				-0.4
4,251,655	+				+0.7
4,251,655	+				+0.2
4,251,656	-				-1.1
4,251,656	-				+0.4
4,251,656	-				-2.3
4,251,656	-				-0.1
4,251,656	-				+0.7
4,251,656	-				-0.4
4,251,656	-				-1.1
4,251,678	-				-0.9
4,251,678	-				+0.5
4,251,678	-				+0.4
4,251,678	-				+0.2
4,251,710	+				+1.6
4,251,710	+				+0.1
4,251,711	-				+3.2
4,251,711	-				+0.1
4,251,711	-				-0.2
4,251,711	-				-0.1
4,251,733	+				+0.1
4,251,734	-				+0.7
4,251,770	+		Sama_3612	0.11	-0.5
4,251,770	+		Sama_3612	0.11	+0.5
4,251,771	-		Sama_3612	0.11	-1.1
4,251,771	-		Sama_3612	0.11	-0.5
4,251,781	+		Sama_3612	0.13	-1.5
4,251,781	+		Sama_3612	0.13	-0.3
4,251,781	+		Sama_3612	0.13	+0.8
4,251,782	-		Sama_3612	0.13	+0.4
4,251,782	-		Sama_3612	0.13	-0.9
4,251,792	+		Sama_3612	0.15	-0.7
4,251,848	+		Sama_3612	0.24	+0.5
4,251,848	+		Sama_3612	0.24	+0.1
4,251,848	+		Sama_3612	0.24	+1.0
4,251,848	+		Sama_3612	0.24	+0.7
4,251,848	+		Sama_3612	0.24	-0.2
4,251,849	-		Sama_3612	0.24	+1.3
4,251,849	-		Sama_3612	0.24	+0.4
4,251,849	-		Sama_3612	0.24	+0.5
4,251,869	+		Sama_3612	0.27	+0.6
4,251,883	+		Sama_3612	0.30	-1.0
4,251,883	+		Sama_3612	0.30	+0.7
4,251,883	+		Sama_3612	0.30	-0.8
4,251,883	+		Sama_3612	0.30	+0.3
4,251,884	-		Sama_3612	0.30	+0.5
4,251,884	-		Sama_3612	0.30	-0.0
4,251,884	-		Sama_3612	0.30	+0.6
4,251,884	-		Sama_3612	0.30	-0.4
4,252,012	+		Sama_3612	0.51	+0.2
4,252,012	+		Sama_3612	0.51	-1.6
4,252,012	+		Sama_3612	0.51	-0.1
4,252,012	+		Sama_3612	0.51	-1.3
4,252,012	+		Sama_3612	0.51	-0.4
4,252,013	-		Sama_3612	0.52	-1.1
4,252,013	-		Sama_3612	0.52	-0.4
4,252,013	-		Sama_3612	0.52	-0.4
4,252,013	-		Sama_3612	0.52	-0.2
4,252,013	-		Sama_3612	0.52	+0.3
4,252,013	-		Sama_3612	0.52	+1.4
4,252,013	-		Sama_3612	0.52	-0.2
4,252,013	-		Sama_3612	0.52	-1.0
4,252,021	+		Sama_3612	0.53	-1.3
4,252,022	-		Sama_3612	0.53	+2.0
4,252,040	+		Sama_3612	0.56	+0.9
4,252,040	+		Sama_3612	0.56	-0.7
4,252,040	+		Sama_3612	0.56	-0.8
4,252,040	+		Sama_3612	0.56	+0.1
4,252,040	+		Sama_3612	0.56	+0.5
4,252,040	+		Sama_3612	0.56	+0.2
4,252,041	-		Sama_3612	0.56	-1.9
4,252,041	-		Sama_3612	0.56	-1.6
4,252,041	-		Sama_3612	0.56	-0.7
4,252,041	-		Sama_3612	0.56	+0.1
4,252,041	-		Sama_3612	0.56	+0.4
4,252,041	-		Sama_3612	0.56	+0.0
4,252,059	+		Sama_3612	0.59	-0.4
4,252,059	+		Sama_3612	0.59	+0.1
4,252,078	+		Sama_3612	0.62	-0.2
4,252,106	+		Sama_3612	0.67	+0.1
4,252,107	-		Sama_3612	0.67	+0.9
4,252,122	-		Sama_3612	0.70	-0.8
4,252,130	+		Sama_3612	0.71	+0.1
4,252,130	+		Sama_3612	0.71	-0.4
4,252,130	+		Sama_3612	0.71	+0.3
4,252,130	+		Sama_3612	0.71	+0.3
4,252,130	+		Sama_3612	0.71	-0.7
4,252,130	+		Sama_3612	0.71	+0.9
4,252,130	+		Sama_3612	0.71	+0.6
4,252,130	+		Sama_3612	0.71	-1.2
4,252,130	+		Sama_3612	0.71	+0.5
4,252,131	-		Sama_3612	0.71	+1.9
4,252,131	-		Sama_3612	0.71	+0.0
4,252,131	-		Sama_3612	0.71	+0.1
4,252,182	+		Sama_3612	0.80	+0.3
4,252,182	+		Sama_3612	0.80	-1.1
4,252,183	-		Sama_3612	0.80	+1.2
4,252,199	+		Sama_3612	0.83	-0.5
4,252,200	-		Sama_3612	0.83	+1.0
4,252,232	+		Sama_3612	0.88	+0.8
4,252,232	+		Sama_3612	0.88	+0.0
4,252,232	+		Sama_3612	0.88	+0.6
4,252,232	+		Sama_3612	0.88	+0.5
4,252,233	-		Sama_3612	0.88	+0.0
4,252,233	-		Sama_3612	0.88	+1.0
4,252,233	-		Sama_3612	0.88	-0.6
4,252,233	-		Sama_3612	0.88	-0.2
4,252,253	+				+0.5
4,252,254	-				+0.9
4,252,324	+				-0.6
4,252,324	+				-0.5
4,252,325	-				-0.7
4,252,325	-				+1.1
4,252,390	+				+1.4
4,252,390	+				+0.4
4,252,391	-				+0.3
4,252,396	+				+1.0
4,252,396	+				+0.1
4,252,396	+				+0.6
4,252,396	+				-0.1
4,252,396	+				+0.5
4,252,396	+				+0.3
4,252,396	+				+1.3
4,252,397	-				-0.5
4,252,397	-				+1.3
4,252,397	-				+0.6
4,252,397	-				-0.4
4,252,397	-				-0.2
4,252,404	+				-0.5
4,252,404	+				+0.5
4,252,404	+				-1.3
4,252,405	-				-0.4
4,252,428	+				+0.3
4,252,428	+				+0.1
4,252,432	+				+0.3
4,252,432	+				-0.4
4,252,432	+				-0.3
4,252,433	-				-0.1
4,252,433	-				-1.0
4,252,433	-				+0.4
4,252,498	+				+0.1
4,252,498	+				+0.8
4,252,498	+				+0.2
4,252,498	+				+1.3
4,252,505	+				-0.4
4,252,505	+				+0.8
4,252,547	+				-0.1
4,252,548	-				+0.9