Strain Fitness in Shewanella amazonensis SB2B around Sama_3423

Experiment: Minimal media, 20C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, 20C
4,052,172	-		Sama_3422	0.68	+0.5
4,052,342	-		Sama_3422	0.76	-2.3
4,052,354	+		Sama_3422	0.77	+0.5
4,052,354	+		Sama_3422	0.77	-0.6
4,052,354	+		Sama_3422	0.77	+2.2
4,052,355	-		Sama_3422	0.77	+0.7
4,052,355	-		Sama_3422	0.77	-0.4
4,052,355	-		Sama_3422	0.77	-0.2
4,052,384	+		Sama_3422	0.78	-0.4
4,052,384	+		Sama_3422	0.78	-0.3
4,052,385	-		Sama_3422	0.78	+0.7
4,052,447	+		Sama_3422	0.81	+1.6
4,052,447	+		Sama_3422	0.81	+0.4
4,052,447	+		Sama_3422	0.81	-0.2
4,052,448	-		Sama_3422	0.81	-0.0
4,052,448	-		Sama_3422	0.81	-0.3
4,052,499	+		Sama_3422	0.84	-1.5
4,052,499	+		Sama_3422	0.84	+0.5
4,052,499	+		Sama_3422	0.84	-0.8
4,052,500	-		Sama_3422	0.84	-1.6
4,052,500	-		Sama_3422	0.84	-0.9
4,052,520	-		Sama_3422	0.85	+1.2
4,052,531	+		Sama_3422	0.85	-1.6
4,052,531	+		Sama_3422	0.85	+1.4
4,052,532	-		Sama_3422	0.85	-0.0
4,052,532	-		Sama_3422	0.85	+0.1
4,052,532	-		Sama_3422	0.85	+0.0
4,052,532	-		Sama_3422	0.85	-0.3
4,052,532	-		Sama_3422	0.85	+0.7
4,052,613	-		Sama_3422	0.89	+1.8
4,052,633	+		Sama_3422	0.90	-1.0
4,052,633	+		Sama_3422	0.90	-0.5
4,052,633	+		Sama_3422	0.90	-1.2
4,052,634	-		Sama_3422	0.90	-0.3
4,052,634	-		Sama_3422	0.90	-1.6
4,052,651	+				-1.1
4,052,651	+				-2.8
4,052,651	+				+0.1
4,052,651	+				+0.6
4,052,651	+				+0.4
4,052,652	-				-0.0
4,052,652	-				-0.1
4,052,680	+				+0.9
4,052,680	+				-0.2
4,052,680	+				-2.8
4,052,690	-				+0.5
4,052,797	+				-0.2
4,052,797	+				-0.2
4,052,797	+				-1.4
4,052,797	+				+0.5
4,052,798	-				-0.1
4,052,798	-				+0.7
4,052,798	-				+0.7
4,052,798	-				-0.7
4,052,798	-				-2.4
4,052,798	-				-1.8
4,052,827	+				+1.2
4,052,827	+				+1.4
4,052,828	-				+0.5
4,052,860	+				-0.5
4,052,860	+				-0.5
4,052,861	-				+1.6
4,052,861	-				+1.2
4,052,890	+				-1.3
4,052,891	-				-0.2
4,052,891	-				-0.9
4,052,918	+				+0.0
4,052,987	+				+1.0
4,052,987	+				-1.4
4,052,987	+				-0.6
4,052,988	-				-1.0
4,052,988	-				+0.1
4,052,988	-				-0.6
4,052,988	-				+0.5
4,052,996	+				-0.2
4,052,997	-				-0.2
4,053,036	+				-0.6
4,053,037	-				+0.6
4,053,041	+				-0.2
4,053,042	-				+0.0
4,053,042	-				+0.6
4,053,042	-				+0.6
4,053,103	-				-0.2
4,053,130	+				-1.8
4,053,131	-				+0.5
4,053,131	-				+0.3
4,053,145	+				-1.8
4,053,145	+				+0.0
4,053,150	+				+0.1
4,053,150	+				-0.8
4,053,151	-				-0.0
4,053,151	-				+0.5
4,053,154	+				+0.8
4,053,154	+				+0.2
4,053,154	+				+0.4
4,053,155	-				-0.2
4,053,155	-				-0.8
4,053,155	-				-0.6
4,053,155	-				+1.5
4,053,160	-				+0.9
4,053,168	+				+0.1
4,053,168	+				-0.7
4,053,168	+				+0.9
4,053,168	+				-0.3
4,053,168	+				+1.0
4,053,168	+				+0.2
4,053,169	-				+0.5
4,053,169	-				+0.1
4,053,169	-				+0.1
4,053,169	-				+0.1
4,053,169	-				+1.2
4,053,174	+				+0.4
4,053,175	-				-0.6
4,053,213	+				-0.0
4,053,213	+				+0.3
4,053,213	+				+0.2
4,053,213	+				+0.4
4,053,283	+				-0.4
4,053,283	+				+0.9
4,053,283	+				-0.5
4,053,283	+				-0.3
4,053,284	-				-1.3
4,053,284	-				+0.4
4,053,287	+				+0.3
4,053,287	+				-0.1
4,053,287	+				-1.4
4,053,287	+				-0.2
4,053,287	+				-1.0
4,053,287	+				-1.1
4,053,287	+				-0.9
4,053,287	+				-1.2
4,053,288	-				+0.5
4,053,288	-				-0.0
4,053,288	-				-0.4
4,053,288	-				-0.2
4,053,288	-				-0.1
4,053,288	-				-0.5
4,053,288	-				-0.6
4,053,288	-				+1.9
4,053,288	-				+0.1
4,053,306	+				-2.1
4,053,306	+				+1.0
4,053,306	+				-0.2
4,053,306	+				-0.6
4,053,306	+				+0.3
4,053,306	+				-0.3
4,053,306	+				-0.2
4,053,307	-				+0.4
4,053,307	-				-0.4
4,053,307	-				-0.7
4,053,318	+		Sama_3423	0.10	-0.6
4,053,339	+		Sama_3423	0.12	+0.2
4,053,339	+		Sama_3423	0.12	+0.3
4,053,339	+		Sama_3423	0.12	+0.6
4,053,339	+		Sama_3423	0.12	+1.0
4,053,339	+		Sama_3423	0.12	-0.1
4,053,339	+		Sama_3423	0.12	+0.7
4,053,340	-		Sama_3423	0.12	+1.8
4,053,340	-		Sama_3423	0.12	-1.3
4,053,388	-		Sama_3423	0.15	-0.1
4,053,388	-		Sama_3423	0.15	+0.3
4,053,415	+		Sama_3423	0.17	-0.7
4,053,415	+		Sama_3423	0.17	-1.3
4,053,415	+		Sama_3423	0.17	-1.0
4,053,415	+		Sama_3423	0.17	+0.2
4,053,415	+		Sama_3423	0.17	-0.3
4,053,416	-		Sama_3423	0.17	-0.5
4,053,416	-		Sama_3423	0.17	+1.2
4,053,514	+		Sama_3423	0.23	+1.1
4,053,514	+		Sama_3423	0.23	+0.9
4,053,514	+		Sama_3423	0.23	+0.1
4,053,515	-		Sama_3423	0.23	+0.2
4,053,556	+		Sama_3423	0.26	-0.1
4,053,556	+		Sama_3423	0.26	+1.4
4,053,557	-		Sama_3423	0.26	+0.1
4,053,557	-		Sama_3423	0.26	+0.2
4,053,557	-		Sama_3423	0.26	-0.6
4,053,619	+		Sama_3423	0.30	-0.4
4,053,620	-		Sama_3423	0.30	+0.5
4,053,647	+		Sama_3423	0.32	-0.5
4,053,647	+		Sama_3423	0.32	-0.2
4,053,647	+		Sama_3423	0.32	-0.4
4,053,647	+		Sama_3423	0.32	+0.4
4,053,647	+		Sama_3423	0.32	+0.1
4,053,647	+		Sama_3423	0.32	-0.3
4,053,648	-		Sama_3423	0.32	-2.3
4,053,651	+		Sama_3423	0.32	+0.2
4,053,651	+		Sama_3423	0.32	-0.9
4,053,651	+		Sama_3423	0.32	-0.3
4,053,651	+		Sama_3423	0.32	-0.8
4,053,651	+		Sama_3423	0.32	+0.1
4,053,651	+		Sama_3423	0.32	-0.2
4,053,651	+		Sama_3423	0.32	-0.1
4,053,651	+		Sama_3423	0.32	+0.8
4,053,651	+		Sama_3423	0.32	-0.7
4,053,651	+		Sama_3423	0.32	+0.5
4,053,651	+		Sama_3423	0.32	+0.2
4,053,651	+		Sama_3423	0.32	+0.2
4,053,651	+		Sama_3423	0.32	-1.5
4,053,651	+		Sama_3423	0.32	+1.1
4,053,651	+		Sama_3423	0.32	+0.1
4,053,651	+		Sama_3423	0.32	+0.2
4,053,651	+		Sama_3423	0.32	+0.5
4,053,651	+		Sama_3423	0.32	+0.1
4,053,651	+		Sama_3423	0.32	+0.3
4,053,651	+		Sama_3423	0.32	+0.5
4,053,651	+		Sama_3423	0.32	+0.9
4,053,651	+		Sama_3423	0.32	+0.2
4,053,652	-		Sama_3423	0.32	-1.1
4,053,652	-		Sama_3423	0.32	-0.4
4,053,652	-		Sama_3423	0.32	-1.7
4,053,652	-		Sama_3423	0.32	+0.8
4,053,652	-		Sama_3423	0.32	+0.6
4,053,652	-		Sama_3423	0.32	-0.4
4,053,652	-		Sama_3423	0.32	+0.5
4,053,652	-		Sama_3423	0.32	+0.7
4,053,652	-		Sama_3423	0.32	+2.8
4,053,652	-		Sama_3423	0.32	-0.9
4,053,652	-		Sama_3423	0.32	+0.1
4,053,652	-		Sama_3423	0.32	-0.3
4,053,652	-		Sama_3423	0.32	+0.0
4,053,652	-		Sama_3423	0.32	+1.0
4,053,652	-		Sama_3423	0.32	-0.3
4,053,652	-		Sama_3423	0.32	+0.0
4,053,652	-		Sama_3423	0.32	+0.3
4,053,654	+		Sama_3423	0.32	+1.0
4,053,654	+		Sama_3423	0.32	+0.5
4,053,655	-		Sama_3423	0.32	-0.5
4,053,655	-		Sama_3423	0.32	-0.3
4,053,655	-		Sama_3423	0.32	+0.4
4,053,655	-		Sama_3423	0.32	-0.4
4,053,689	+		Sama_3423	0.34	+1.0
4,053,689	+		Sama_3423	0.34	+0.8
4,053,689	+		Sama_3423	0.34	-0.5
4,053,689	+		Sama_3423	0.34	+0.2
4,053,689	+		Sama_3423	0.34	+0.7
4,053,689	+		Sama_3423	0.34	+1.1
4,053,689	+		Sama_3423	0.34	+0.0
4,053,689	+		Sama_3423	0.34	-0.6
4,053,689	+		Sama_3423	0.34	+0.6
4,053,689	+		Sama_3423	0.34	-1.6
4,053,690	-		Sama_3423	0.34	-0.1
4,053,690	-		Sama_3423	0.34	-0.3
4,053,690	-		Sama_3423	0.34	-0.4
4,053,690	-		Sama_3423	0.34	+0.3
4,053,690	-		Sama_3423	0.34	-0.0
4,053,690	-		Sama_3423	0.34	-0.4
4,053,690	-		Sama_3423	0.34	+0.2
4,053,690	-		Sama_3423	0.34	-0.1
4,053,690	-		Sama_3423	0.34	-1.0
4,053,690	-		Sama_3423	0.34	+0.7
4,053,690	-		Sama_3423	0.34	+0.9
4,053,690	-		Sama_3423	0.34	+0.9
4,053,723	+		Sama_3423	0.36	-0.8
4,053,723	+		Sama_3423	0.36	+0.0
4,053,723	+		Sama_3423	0.36	+0.6
4,053,723	+		Sama_3423	0.36	-0.5
4,053,723	+		Sama_3423	0.36	-0.0
4,053,723	+		Sama_3423	0.36	+0.4
4,053,723	+		Sama_3423	0.36	+0.1
4,053,724	-		Sama_3423	0.37	+0.5
4,053,724	-		Sama_3423	0.37	-1.6
4,053,724	-		Sama_3423	0.37	-0.0
4,053,724	-		Sama_3423	0.37	+0.5
4,053,732	+		Sama_3423	0.37	-0.6
4,053,732	+		Sama_3423	0.37	-0.4
4,053,733	-		Sama_3423	0.37	-0.2
4,053,776	+		Sama_3423	0.40	-0.5
4,053,814	+		Sama_3423	0.42	+0.5
4,053,814	+		Sama_3423	0.42	-0.0
4,053,815	-		Sama_3423	0.42	-0.3
4,053,862	-		Sama_3423	0.45	-0.5
4,053,893	+		Sama_3423	0.47	+1.4
4,053,947	+		Sama_3423	0.51	+0.2
4,053,948	-		Sama_3423	0.51	-0.5
4,053,958	+		Sama_3423	0.52	-0.2
4,053,958	+		Sama_3423	0.52	+1.0
4,053,958	+		Sama_3423	0.52	+1.1
4,053,958	+		Sama_3423	0.52	+0.4
4,053,958	+		Sama_3423	0.52	+0.5
4,053,958	+		Sama_3423	0.52	+0.0
4,053,958	+		Sama_3423	0.52	-0.8
4,053,959	-		Sama_3423	0.52	+0.4
4,053,959	-		Sama_3423	0.52	-0.9
4,053,959	-		Sama_3423	0.52	+0.6
4,053,959	-		Sama_3423	0.52	+0.0
4,053,959	-		Sama_3423	0.52	-0.2
4,054,014	+		Sama_3423	0.55	+0.8
4,054,015	-		Sama_3423	0.55	-0.0
4,054,066	+		Sama_3423	0.59	-0.2
4,054,066	+		Sama_3423	0.59	-0.6
4,054,066	+		Sama_3423	0.59	+1.5
4,054,067	-		Sama_3423	0.59	-0.4
4,054,067	-		Sama_3423	0.59	-0.9
4,054,067	-		Sama_3423	0.59	-0.1
4,054,121	-		Sama_3423	0.62	+0.7
4,054,121	-		Sama_3423	0.62	+0.1
4,054,269	+		Sama_3423	0.72	-0.4
4,054,269	+		Sama_3423	0.72	+1.2
4,054,269	+		Sama_3423	0.72	+0.9
4,054,269	+		Sama_3423	0.72	-1.8
4,054,269	+		Sama_3423	0.72	+0.3
4,054,269	+		Sama_3423	0.72	+0.6
4,054,270	-		Sama_3423	0.72	+0.3
4,054,270	-		Sama_3423	0.72	-0.3
4,054,270	-		Sama_3423	0.72	+0.4
4,054,270	-		Sama_3423	0.72	+0.1
4,054,270	-		Sama_3423	0.72	+0.3
4,054,270	-		Sama_3423	0.72	+1.2
4,054,270	-		Sama_3423	0.72	-1.2
4,054,270	-		Sama_3423	0.72	-0.4
4,054,310	+		Sama_3423	0.74	-0.1
4,054,310	+		Sama_3423	0.74	+1.9
4,054,310	+		Sama_3423	0.74	+0.3
4,054,310	+		Sama_3423	0.74	+0.8
4,054,369	+		Sama_3423	0.78	+0.3
4,054,370	-		Sama_3423	0.78	+0.9
4,054,376	-		Sama_3423	0.79	+0.6
4,054,462	+		Sama_3423	0.84	-0.3
4,054,462	+		Sama_3423	0.84	-0.1
4,054,462	+		Sama_3423	0.84	+2.2
4,054,462	+		Sama_3423	0.84	-0.3
4,054,463	-		Sama_3423	0.84	+0.3
4,054,505	-		Sama_3423	0.87	-0.1
4,054,505	-		Sama_3423	0.87	-0.1
4,054,505	-		Sama_3423	0.87	+0.3
4,054,607	+				+0.3
4,054,608	-				-0.1
4,054,608	-				+0.3
4,054,608	-				-0.6
4,054,630	+				+0.7
4,054,631	-				+0.4
4,054,693	+				+1.4
4,054,694	-				-0.3
4,054,694	-				+1.2
4,054,720	+				-0.1
4,054,744	-				+0.4
4,054,756	+				+0.8
4,054,756	+				+0.5
4,054,757	-				-0.0
4,054,757	-				-0.6
4,054,774	+				-0.3
4,054,774	+				+0.3
4,054,774	+				+0.7
4,054,774	+				-0.5
4,054,775	-				-1.0
4,054,775	-				-3.0
4,054,782	-				-0.4
4,054,782	-				-0.8
4,054,782	-				-0.3
4,054,806	-				-1.1
4,054,842	+				-0.1
4,054,842	+				-0.2
4,054,842	+				+0.0
4,054,843	-				-0.6
4,054,856	-				-0.6
4,054,870	-				-2.0
4,054,885	+				+0.2
4,054,885	+				-1.6
4,054,885	+				-1.0
4,054,885	+				-0.4
4,054,886	-				-0.0
4,054,886	-				-0.3
4,054,886	-				+0.2
4,054,886	-				-0.3
4,054,887	+				-1.3
4,054,888	-				-1.0
4,054,905	+				+0.7
4,054,905	+				+0.1
4,054,906	-				-1.8
4,054,906	-				-0.1
4,054,906	-				+0.2
4,054,906	-				-1.6
4,054,906	-				-0.6
4,054,921	+				-2.0
4,054,921	+				+0.0
4,054,921	+				-0.1
4,054,922	-				+1.2
4,054,967	+		Sama_3424	0.15	+0.2
4,054,967	+		Sama_3424	0.15	-0.7
4,054,967	+		Sama_3424	0.15	-1.4
4,054,968	-		Sama_3424	0.15	+0.8
4,054,968	-		Sama_3424	0.15	+0.1
4,054,968	-		Sama_3424	0.15	-1.3
4,054,968	-		Sama_3424	0.15	-0.1
4,055,000	+		Sama_3424	0.25	-0.1
4,055,000	+		Sama_3424	0.25	-0.8
4,055,000	+		Sama_3424	0.25	+0.1
4,055,000	+		Sama_3424	0.25	-1.5
4,055,000	+		Sama_3424	0.25	-0.2
4,055,001	-		Sama_3424	0.26	-0.4
4,055,001	-		Sama_3424	0.26	+0.6
4,055,001	-		Sama_3424	0.26	+0.5
4,055,001	-		Sama_3424	0.26	-0.7
4,055,001	-		Sama_3424	0.26	-1.1
4,055,001	-		Sama_3424	0.26	-0.3
4,055,001	-		Sama_3424	0.26	-0.3
4,055,023	+		Sama_3424	0.33	-1.0
4,055,023	+		Sama_3424	0.33	-2.8
4,055,023	+		Sama_3424	0.33	-0.2
4,055,023	+		Sama_3424	0.33	+1.8
4,055,034	+		Sama_3424	0.36	-0.6
4,055,034	+		Sama_3424	0.36	+0.7
4,055,035	-		Sama_3424	0.37	-0.6
4,055,035	-		Sama_3424	0.37	-0.9
4,055,048	+		Sama_3424	0.41	-3.6
4,055,048	+		Sama_3424	0.41	-0.4
4,055,048	+		Sama_3424	0.41	-1.2
4,055,049	-		Sama_3424	0.41	+0.9
4,055,049	-		Sama_3424	0.41	+1.4
4,055,049	-		Sama_3424	0.41	+0.2
4,055,210	+				+0.1
4,055,211	-				+0.6
4,055,222	+				-0.3
4,055,222	+				+0.6
4,055,222	+				-0.6
4,055,223	-				+0.3
4,055,223	-				-0.2
4,055,223	-				-0.1
4,055,236	+				+1.2
4,055,236	+				-0.1
4,055,236	+				+0.9
4,055,237	-				-0.1
4,055,237	-				-0.9
4,055,237	-				-0.4
4,055,237	-				-0.4
4,055,237	-				-0.2
4,055,237	-				-1.1
4,055,240	+				+0.7
4,055,241	-				+1.3
4,055,302	+				-0.1
4,055,303	-				+0.7
4,055,318	+				-0.0
4,055,318	+				-0.3
4,055,318	+				-0.9
4,055,319	-				+0.6
4,055,319	-				+0.1
4,055,319	-				-0.7
4,055,326	-				+0.1
4,055,326	-				+0.2
4,055,326	-				-0.3
4,055,331	+				-1.1
4,055,331	+				-0.3
4,055,331	+				-0.2
4,055,332	-				+0.5
4,055,343	+				+0.0
4,055,343	+				-0.2
4,055,344	-				-0.3
4,055,367	+				-0.2
4,055,368	-				-0.7
4,055,368	-				-1.2
4,055,392	+		Sama_3425	0.11	+0.5
4,055,392	+		Sama_3425	0.11	+0.9
4,055,393	-		Sama_3425	0.11	-1.4
4,055,393	-		Sama_3425	0.11	+0.3
4,055,394	+		Sama_3425	0.12	+0.9
4,055,394	+		Sama_3425	0.12	+0.7
4,055,394	+		Sama_3425	0.12	-1.4
4,055,394	+		Sama_3425	0.12	-0.5
4,055,394	+		Sama_3425	0.12	-1.3
4,055,394	+		Sama_3425	0.12	+1.1
4,055,395	-		Sama_3425	0.12	-0.2
4,055,395	-		Sama_3425	0.12	-0.3
4,055,395	-		Sama_3425	0.12	-0.4
4,055,395	-		Sama_3425	0.12	+0.9
4,055,395	-		Sama_3425	0.12	+0.1
4,055,395	-		Sama_3425	0.12	-1.1
4,055,425	+		Sama_3425	0.17	-0.0
4,055,425	+		Sama_3425	0.17	-0.6
4,055,425	+		Sama_3425	0.17	+0.3
4,055,425	+		Sama_3425	0.17	-1.8
4,055,426	-		Sama_3425	0.18	-0.8
4,055,426	-		Sama_3425	0.18	+0.3
4,055,426	-		Sama_3425	0.18	-0.2
4,055,426	-		Sama_3425	0.18	+0.1
4,055,426	-		Sama_3425	0.18	+0.2
4,055,433	+		Sama_3425	0.19	-2.4
4,055,433	+		Sama_3425	0.19	+0.1
4,055,548	+		Sama_3425	0.40	+0.5
4,055,555	+		Sama_3425	0.42	-0.6
4,055,556	-		Sama_3425	0.42	-0.5
4,055,556	-		Sama_3425	0.42	-1.9
4,055,556	-		Sama_3425	0.42	-0.5
4,055,556	-		Sama_3425	0.42	-0.6
4,055,556	-		Sama_3425	0.42	-0.2
4,055,596	-		Sama_3425	0.49	-0.6
4,055,663	+		Sama_3425	0.62	-0.5
4,055,663	+		Sama_3425	0.62	+0.6
4,055,663	+		Sama_3425	0.62	-0.2
4,055,663	+		Sama_3425	0.62	+0.2
4,055,663	+		Sama_3425	0.62	-0.2
4,055,663	+		Sama_3425	0.62	-0.7
4,055,663	+		Sama_3425	0.62	-0.5
4,055,663	+		Sama_3425	0.62	+0.5
4,055,663	+		Sama_3425	0.62	-0.6
4,055,663	+		Sama_3425	0.62	-1.4
4,055,664	-		Sama_3425	0.62	-1.0
4,055,664	-		Sama_3425	0.62	-0.1
4,055,664	-		Sama_3425	0.62	+0.6
4,055,664	-		Sama_3425	0.62	+0.3
4,055,664	-		Sama_3425	0.62	-0.5
4,055,667	+		Sama_3425	0.62	-0.6
4,055,667	+		Sama_3425	0.62	-0.4
4,055,668	-		Sama_3425	0.63	+0.1
4,055,668	-		Sama_3425	0.63	-0.7
4,055,668	-		Sama_3425	0.63	+0.2
4,055,668	-		Sama_3425	0.63	-0.0