Strain Fitness in Shewanella amazonensis SB2B around Sama_3043

Experiment: Minimal media, 20C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, 20C
3,620,044	-		Sama_3042	0.16	-2.2
3,620,044	-		Sama_3042	0.16	-3.4
3,620,044	-		Sama_3042	0.16	-1.1
3,620,074	-		Sama_3042	0.18	-2.2
3,620,136	-		Sama_3042	0.23	-1.9
3,620,141	-		Sama_3042	0.24	-3.3
3,620,282	-		Sama_3042	0.36	-2.7
3,620,282	-		Sama_3042	0.36	-2.2
3,620,294	-		Sama_3042	0.37	-2.5
3,620,294	-		Sama_3042	0.37	-2.1
3,620,301	-		Sama_3042	0.38	-3.4
3,620,301	-		Sama_3042	0.38	-3.1
3,620,301	-		Sama_3042	0.38	-2.9
3,620,323	-		Sama_3042	0.39	-1.7
3,620,323	-		Sama_3042	0.39	-2.7
3,620,365	-		Sama_3042	0.43	-2.9
3,620,365	-		Sama_3042	0.43	-3.4
3,620,365	-		Sama_3042	0.43	-2.4
3,620,475	-		Sama_3042	0.52	-3.6
3,620,475	-		Sama_3042	0.52	-2.2
3,620,511	-		Sama_3042	0.55	-3.6
3,620,524	-		Sama_3042	0.56	-2.7
3,620,534	-		Sama_3042	0.57	-3.0
3,620,534	-		Sama_3042	0.57	-3.0
3,620,534	-		Sama_3042	0.57	-3.1
3,620,534	-		Sama_3042	0.57	-2.6
3,620,534	-		Sama_3042	0.57	-2.1
3,620,534	-		Sama_3042	0.57	-2.5
3,620,534	-		Sama_3042	0.57	-3.0
3,620,534	-		Sama_3042	0.57	-2.6
3,620,562	-		Sama_3042	0.60	-1.6
3,620,564	-		Sama_3042	0.60	-2.9
3,620,564	-		Sama_3042	0.60	-2.1
3,620,564	-		Sama_3042	0.60	-3.6
3,620,564	-		Sama_3042	0.60	-0.0
3,620,564	-		Sama_3042	0.60	-1.6
3,620,564	-		Sama_3042	0.60	-2.4
3,620,564	-		Sama_3042	0.60	-3.8
3,620,564	-		Sama_3042	0.60	-2.2
3,620,603	-		Sama_3042	0.63	-1.8
3,620,684	-		Sama_3042	0.70	+1.0
3,620,684	-		Sama_3042	0.70	-4.7
3,620,684	-		Sama_3042	0.70	-1.4
3,620,684	-		Sama_3042	0.70	-2.7
3,620,684	-		Sama_3042	0.70	-2.5
3,620,744	-		Sama_3042	0.75	-3.2
3,620,744	-		Sama_3042	0.75	-2.5
3,620,744	-		Sama_3042	0.75	-2.6
3,620,832	-		Sama_3042	0.83	-3.0
3,620,832	-		Sama_3042	0.83	-2.7
3,620,876	-		Sama_3042	0.86	-3.0
3,620,876	-		Sama_3042	0.86	-2.2
3,620,907	-		Sama_3042	0.89	-0.3
3,620,907	-		Sama_3042	0.89	-4.3
3,620,985	-				-2.1
3,620,985	-				-2.0
3,620,985	-				-3.3
3,620,985	-				-2.5
3,620,985	-				-1.1
3,620,985	-				-3.7
3,620,988	-				-0.9
3,620,988	-				-2.0
3,620,988	-				-2.4
3,620,988	-				-1.8
3,622,984	-				-0.4
3,623,055	+		Sama_3044	0.14	-2.2
3,623,056	-		Sama_3044	0.14	-3.8
3,623,056	-		Sama_3044	0.14	-3.6
3,623,056	-		Sama_3044	0.14	-2.9
3,623,056	-		Sama_3044	0.14	-2.8
3,623,056	-		Sama_3044	0.14	-1.6
3,623,056	-		Sama_3044	0.14	-2.2
3,623,074	+		Sama_3044	0.17	-2.3
3,623,074	+		Sama_3044	0.17	-1.8
3,623,075	-		Sama_3044	0.17	-0.6
3,623,075	-		Sama_3044	0.17	-1.7
3,623,075	-		Sama_3044	0.17	-3.5
3,623,077	+		Sama_3044	0.17	-3.0
3,623,077	+		Sama_3044	0.17	-2.8
3,623,078	-		Sama_3044	0.18	-0.4
3,623,078	-		Sama_3044	0.18	-1.2
3,623,078	-		Sama_3044	0.18	-2.8
3,623,099	-		Sama_3044	0.21	-0.0
3,623,125	-		Sama_3044	0.26	-1.6
3,623,125	-		Sama_3044	0.26	+0.5
3,623,125	-		Sama_3044	0.26	-2.5
3,623,125	-		Sama_3044	0.26	-4.0
3,623,125	-		Sama_3044	0.26	-3.1
3,623,130	+		Sama_3044	0.27	-2.2
3,623,171	-		Sama_3044	0.34	-3.6
3,623,209	+		Sama_3044	0.40	-2.7
3,623,210	-		Sama_3044	0.40	-4.4
3,623,210	-		Sama_3044	0.40	-3.1
3,623,210	-		Sama_3044	0.40	+1.1
3,623,224	+		Sama_3044	0.43	-3.8
3,623,224	+		Sama_3044	0.43	-2.0
3,623,224	+		Sama_3044	0.43	-0.6
3,623,225	-		Sama_3044	0.43	-3.0
3,623,225	-		Sama_3044	0.43	-2.0
3,623,231	+		Sama_3044	0.44	-2.8
3,623,232	-		Sama_3044	0.44	-3.5
3,623,266	+		Sama_3044	0.50	-0.6
3,623,267	-		Sama_3044	0.50	-0.7
3,623,308	+		Sama_3044	0.57	-2.0
3,623,323	+		Sama_3044	0.60	-2.9
3,623,323	+		Sama_3044	0.60	-2.6
3,623,323	+		Sama_3044	0.60	-2.2
3,623,323	+		Sama_3044	0.60	-3.5
3,623,323	+		Sama_3044	0.60	-2.5
3,623,323	+		Sama_3044	0.60	-1.3
3,623,323	+		Sama_3044	0.60	-4.0
3,623,324	-		Sama_3044	0.60	-3.8
3,623,324	-		Sama_3044	0.60	-2.0
3,623,324	-		Sama_3044	0.60	+0.3
3,623,324	-		Sama_3044	0.60	-1.8
3,623,324	-		Sama_3044	0.60	-2.0
3,623,324	-		Sama_3044	0.60	-4.1
3,623,324	-		Sama_3044	0.60	-2.2
3,623,324	-		Sama_3044	0.60	-1.0
3,623,324	-		Sama_3044	0.60	-1.8
3,623,324	-		Sama_3044	0.60	-2.6
3,623,397	+		Sama_3044	0.73	-2.2
3,623,397	+		Sama_3044	0.73	-2.9
3,623,398	-		Sama_3044	0.73	-1.6
3,623,398	-		Sama_3044	0.73	-1.5
3,623,398	-		Sama_3044	0.73	-1.9
3,623,430	-		Sama_3044	0.79	-4.5
3,623,430	-		Sama_3044	0.79	-2.0
3,623,430	-		Sama_3044	0.79	-4.3
3,623,439	+		Sama_3044	0.80	-3.7
3,623,439	+		Sama_3044	0.80	-2.0
3,623,499	+				-1.8
3,623,540	+				-1.8
3,623,540	+				-3.1
3,623,541	-				-3.1
3,623,542	+				-3.9
3,623,542	+				-3.1
3,623,542	+				-2.3
3,623,552	+				-2.7
3,623,552	+				-1.8
3,623,552	+				-3.1
3,623,552	+				-3.3
3,623,552	+				-3.0
3,623,552	+				-1.0
3,623,552	+				-2.5
3,623,552	+				-4.6
3,623,552	+				-3.1
3,623,552	+				-2.8
3,623,552	+				-2.7
3,623,552	+				-1.3
3,623,552	+				-1.5
3,623,552	+				-2.5
3,623,552	+				-3.4
3,623,552	+				-2.3
3,623,553	-				-1.9
3,623,553	-				-0.0
3,623,553	-				-0.0
3,623,553	-				-0.1
3,623,553	-				-0.0
3,623,553	-				-1.1
3,623,553	-				-0.5
3,623,553	-				+0.3
3,623,553	-				-0.5
3,623,553	-				-0.5
3,623,553	-				-0.3
3,623,553	-				+0.3
3,623,553	-				+0.2
3,623,553	-				-1.5
3,623,553	-				-0.3
3,623,553	-				-0.8
3,623,553	-				-0.3
3,623,553	-				-0.5
3,623,553	-				-1.6
3,623,553	-				-1.7
3,623,553	-				-0.6
3,623,553	-				+0.5
3,623,643	+				-2.0
3,623,644	-				-0.6
3,623,712	-		Sama_3045	0.16	-1.3
3,623,712	-		Sama_3045	0.16	-0.6
3,623,743	-		Sama_3045	0.19	-0.6
3,623,764	+		Sama_3045	0.22	+0.3
3,623,786	+		Sama_3045	0.24	-1.8
3,623,787	-		Sama_3045	0.25	+0.4
3,623,787	-		Sama_3045	0.25	-2.0