Strain Fitness in Shewanella amazonensis SB2B around Sama_2785

Experiment: Minimal media, 20C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, 20C
3,326,811	+				+0.3
3,326,812	-				-0.0
3,326,827	+				-1.2
3,326,827	+				+0.1
3,326,828	-				-0.3
3,326,828	-				+1.3
3,326,828	-				-0.2
3,326,828	-				-0.3
3,326,828	-				-0.2
3,326,828	-				-0.6
3,326,828	-				+0.4
3,326,829	+				-0.3
3,326,829	+				-1.6
3,326,829	+				-0.3
3,326,829	+				+0.3
3,326,829	+				+1.4
3,326,829	+				+0.8
3,326,829	+				-0.0
3,326,829	+				+0.6
3,326,830	-				+0.5
3,326,830	-				+0.1
3,326,830	-				-0.7
3,326,830	-				+0.7
3,326,830	-				+0.2
3,326,911	+				+0.0
3,326,911	+				-0.6
3,326,911	+				-0.2
3,326,911	+				+0.4
3,326,912	-				+0.1
3,326,912	-				-0.4
3,326,912	-				+0.6
3,326,949	-				-0.4
3,326,949	-				+0.4
3,327,016	+				-0.2
3,327,016	+				-0.1
3,327,016	+				+0.8
3,327,017	-				+0.5
3,327,076	-				+0.8
3,327,076	-				-0.9
3,327,146	-		Sama_2784	0.19	+0.5
3,327,156	-		Sama_2784	0.22	-1.1
3,327,191	-		Sama_2784	0.29	-0.0
3,327,191	-		Sama_2784	0.29	+0.8
3,327,200	+		Sama_2784	0.31	-1.7
3,327,200	+		Sama_2784	0.31	-0.9
3,327,200	+		Sama_2784	0.31	-0.5
3,327,200	+		Sama_2784	0.31	+0.2
3,327,200	+		Sama_2784	0.31	-0.8
3,327,200	+		Sama_2784	0.31	+1.4
3,327,200	+		Sama_2784	0.31	+0.5
3,327,201	-		Sama_2784	0.31	-0.6
3,327,201	-		Sama_2784	0.31	-0.2
3,327,214	+		Sama_2784	0.34	+0.4
3,327,214	+		Sama_2784	0.34	+0.2
3,327,238	+		Sama_2784	0.39	-0.2
3,327,238	+		Sama_2784	0.39	+0.5
3,327,238	+		Sama_2784	0.39	-0.8
3,327,239	-		Sama_2784	0.39	-0.5
3,327,319	+		Sama_2784	0.56	+0.0
3,327,362	+		Sama_2784	0.65	+0.0
3,327,363	-		Sama_2784	0.65	+0.3
3,327,363	-		Sama_2784	0.65	+0.0
3,327,363	-		Sama_2784	0.65	+0.5
3,327,435	+		Sama_2784	0.80	-1.2
3,327,435	+		Sama_2784	0.80	+0.3
3,327,435	+		Sama_2784	0.80	-0.2
3,327,759	+		Sama_2785	0.24	+0.5
3,327,759	+		Sama_2785	0.24	+1.3
3,327,759	+		Sama_2785	0.24	-0.5
3,327,759	+		Sama_2785	0.24	-0.9
3,327,759	+		Sama_2785	0.24	-0.3
3,327,759	+		Sama_2785	0.24	+0.2
3,327,759	+		Sama_2785	0.24	-0.1
3,327,759	+		Sama_2785	0.24	+0.3
3,327,760	-		Sama_2785	0.24	-0.2
3,327,760	-		Sama_2785	0.24	+0.4
3,327,760	-		Sama_2785	0.24	+0.2
3,327,760	-		Sama_2785	0.24	-0.4
3,327,776	+		Sama_2785	0.26	+0.4
3,327,777	-		Sama_2785	0.26	-0.1
3,327,866	+		Sama_2785	0.38	-0.3
3,327,866	+		Sama_2785	0.38	+0.3
3,327,891	+		Sama_2785	0.41	+0.5
3,327,892	-		Sama_2785	0.41	-2.2
3,327,892	-		Sama_2785	0.41	-0.5
3,327,893	+		Sama_2785	0.41	+0.0
3,327,893	+		Sama_2785	0.41	+0.4
3,327,893	-		Sama_2785	0.41	-1.1
3,327,893	+		Sama_2785	0.41	+1.1
3,327,893	+		Sama_2785	0.41	+0.1
3,327,893	+		Sama_2785	0.41	+0.5
3,327,893	+		Sama_2785	0.41	+0.1
3,327,893	+		Sama_2785	0.41	+0.4
3,327,894	-		Sama_2785	0.42	-0.3
3,327,894	-		Sama_2785	0.42	+0.4
3,327,894	-		Sama_2785	0.42	-0.6
3,327,894	-		Sama_2785	0.42	+1.5
3,327,894	-		Sama_2785	0.42	+1.1
3,327,929	+		Sama_2785	0.46	-1.7
3,327,929	+		Sama_2785	0.46	-1.1
3,327,991	+		Sama_2785	0.54	-0.5
3,328,011	+		Sama_2785	0.57	-0.3
3,328,012	-		Sama_2785	0.57	+0.2
3,328,012	-		Sama_2785	0.57	+1.4
3,328,012	-		Sama_2785	0.57	-0.1
3,328,033	+		Sama_2785	0.60	+1.5
3,328,034	-		Sama_2785	0.60	+0.4
3,328,034	-		Sama_2785	0.60	+0.3
3,328,034	-		Sama_2785	0.60	-0.1
3,328,034	-		Sama_2785	0.60	+0.4
3,328,125	+		Sama_2785	0.72	-0.1
3,328,126	-		Sama_2785	0.72	+1.3
3,328,126	-		Sama_2785	0.72	-0.1
3,328,126	-		Sama_2785	0.72	+0.3
3,328,126	-		Sama_2785	0.72	-0.1
3,328,139	+		Sama_2785	0.74	+0.9
3,328,222	+		Sama_2785	0.85	-0.1
3,328,223	-		Sama_2785	0.85	+0.3
3,328,223	-		Sama_2785	0.85	+0.0
3,328,254	+		Sama_2785	0.89	-0.5
3,328,254	+		Sama_2785	0.89	-0.1
3,328,255	-		Sama_2785	0.89	+0.3
3,328,284	+				+0.3
3,328,285	-				-0.4
3,328,285	-				+1.1
3,328,285	-				-0.7
3,328,335	+				-0.1
3,328,335	+				+0.5
3,328,336	-				-1.5
3,328,348	+				+0.2
3,328,349	-				+0.1
3,328,401	-				-1.5
3,328,424	+		Sama_2786	0.12	-3.1
3,328,457	+		Sama_2786	0.18	-0.7
3,328,457	+		Sama_2786	0.18	-2.5
3,328,457	+		Sama_2786	0.18	-0.7
3,328,457	+		Sama_2786	0.18	-2.1
3,328,457	+		Sama_2786	0.18	-1.7
3,328,458	-		Sama_2786	0.18	-1.0
3,328,458	-		Sama_2786	0.18	-3.0
3,328,458	-		Sama_2786	0.18	-1.7
3,328,458	-		Sama_2786	0.18	-0.7
3,328,458	-		Sama_2786	0.18	-2.5
3,328,458	-		Sama_2786	0.18	+0.9
3,328,458	-		Sama_2786	0.18	-1.7
3,328,522	+		Sama_2786	0.28	-1.0
3,328,523	-		Sama_2786	0.28	-2.1
3,328,562	+		Sama_2786	0.34	-1.7
3,328,563	-		Sama_2786	0.34	+1.1
3,328,563	-		Sama_2786	0.34	-3.0
3,328,564	+		Sama_2786	0.35	-1.1
3,328,565	-		Sama_2786	0.35	-3.6
3,328,565	-		Sama_2786	0.35	-2.5
3,328,565	-		Sama_2786	0.35	-2.9
3,328,565	-		Sama_2786	0.35	-2.0
3,328,565	-		Sama_2786	0.35	-3.2
3,328,642	+		Sama_2786	0.47	-2.2
3,328,642	+		Sama_2786	0.47	-2.6
3,328,643	-		Sama_2786	0.47	-3.7
3,328,643	-		Sama_2786	0.47	-0.5
3,328,674	+		Sama_2786	0.52	-0.1
3,328,674	+		Sama_2786	0.52	-1.1
3,328,675	-		Sama_2786	0.52	-3.7
3,328,675	-		Sama_2786	0.52	-2.1
3,328,675	-		Sama_2786	0.52	-2.1
3,328,689	-		Sama_2786	0.55	-4.3
3,328,713	-		Sama_2786	0.58	+0.3
3,328,713	-		Sama_2786	0.58	-1.3
3,328,731	+		Sama_2786	0.61	-0.7
3,328,732	-		Sama_2786	0.61	-2.7
3,328,732	-		Sama_2786	0.61	-1.5
3,328,793	-		Sama_2786	0.71	-2.4
3,328,824	-		Sama_2786	0.76	-2.1
3,328,925	+				-1.2
3,328,925	+				-1.9
3,328,925	+				-2.9
3,328,926	-				-2.7
3,328,926	-				-3.7
3,328,926	-				-2.1
3,328,986	+				+0.9
3,328,986	+				-0.4
3,328,987	-				+1.2
3,328,994	+				-1.8
3,328,995	-				-0.7
3,328,995	-				+0.4
3,329,012	+				-0.1
3,329,012	+				-0.7
3,329,012	+				-1.4
3,329,012	+				-1.2
3,329,013	-				+0.9
3,329,013	-				+0.7
3,329,013	-				+0.7
3,329,016	-				+0.4
3,329,022	-				-0.3
3,329,030	+				+1.2
3,329,063	+				+0.4
3,329,063	+				-0.7
3,329,063	+				-0.1
3,329,063	+				+0.9
3,329,063	+				+0.1
3,329,064	-				-0.2
3,329,064	-				-0.7
3,329,064	-				-0.1
3,329,064	-				+1.3
3,329,064	-				-1.1
3,329,068	-				-0.4
3,329,121	-				-0.7
3,329,124	-				-0.1
3,329,124	-				-1.5
3,329,234	+		Sama_2787	0.17	+0.1
3,329,234	+		Sama_2787	0.17	-0.1
3,329,234	+		Sama_2787	0.17	-0.3
3,329,235	-		Sama_2787	0.17	+0.1
3,329,235	-		Sama_2787	0.17	-0.5
3,329,235	-		Sama_2787	0.17	+0.6
3,329,243	+		Sama_2787	0.18	-1.7
3,329,243	+		Sama_2787	0.18	-0.7
3,329,244	-		Sama_2787	0.18	+0.6
3,329,244	-		Sama_2787	0.18	+0.5
3,329,257	+		Sama_2787	0.21	+1.8
3,329,257	+		Sama_2787	0.21	-1.8
3,329,258	-		Sama_2787	0.21	-0.3