Strain Fitness in Shewanella amazonensis SB2B around Sama_2079

Experiment: Minimal media, 20C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media, 20C
2,519,373	+		Sama_2078	0.76	-3.1
2,519,374	-		Sama_2078	0.76	-2.6
2,519,374	-		Sama_2078	0.76	-1.8
2,519,461	-		Sama_2078	0.79	-1.4
2,519,463	+		Sama_2078	0.79	-2.1
2,519,463	+		Sama_2078	0.79	-4.2
2,519,464	-		Sama_2078	0.79	-1.0
2,519,700	+		Sama_2078	0.86	-4.3
2,519,787	+		Sama_2078	0.89	-3.1
2,519,787	+		Sama_2078	0.89	-3.8
2,519,787	+		Sama_2078	0.89	-3.1
2,519,787	+		Sama_2078	0.89	-3.6
2,519,788	-		Sama_2078	0.89	-1.6
2,519,788	-		Sama_2078	0.89	-4.2
2,519,788	-		Sama_2078	0.89	-2.4
2,519,789	+		Sama_2078	0.89	-2.4
2,519,789	+		Sama_2078	0.89	-1.0
2,519,789	+		Sama_2078	0.89	-3.3
2,519,789	+		Sama_2078	0.89	-2.5
2,519,790	-		Sama_2078	0.89	-1.8
2,519,790	-		Sama_2078	0.89	-3.2
2,519,790	-		Sama_2078	0.89	-3.7
2,519,790	-		Sama_2078	0.89	-1.7
2,519,791	+		Sama_2078	0.89	-1.4
2,519,791	+		Sama_2078	0.89	-5.0
2,519,791	+		Sama_2078	0.89	-0.4
2,519,791	+		Sama_2078	0.89	-3.4
2,519,791	+		Sama_2078	0.89	-4.1
2,519,792	-		Sama_2078	0.89	-3.3
2,519,792	-		Sama_2078	0.89	-3.6
2,519,792	-		Sama_2078	0.89	-3.9
2,519,792	-		Sama_2078	0.89	-0.7
2,519,855	-				-2.2
2,519,868	-				-3.7
2,519,970	-				-4.5
2,520,037	+				-2.6
2,520,037	+				-5.3
2,520,037	+				-3.4
2,520,037	+				-4.6
2,520,037	+				-1.6
2,520,038	-				-2.3
2,520,038	-				-2.4
2,520,038	-				-3.4
2,520,058	+				-1.8
2,520,182	+				-1.2
2,520,182	+				+0.0
2,520,182	+				-2.2
2,520,182	+				-3.4
2,520,182	+				-0.7
2,520,183	-				-0.4
2,520,183	-				-2.2
2,520,183	-				+0.4
2,520,291	+				+1.9
2,520,292	-				+2.1
2,520,294	+				+0.8
2,520,295	-				+0.2
2,520,341	+				+0.2
2,520,376	+				+0.6
2,520,414	-				+0.2
2,520,414	-				+0.6
2,520,428	-				+1.1
2,520,428	-				+2.0
2,520,439	+				+0.1
2,520,536	-				-1.7
2,520,553	+				+0.6
2,520,554	-		Sama_2079	0.10	-0.3
2,520,554	-		Sama_2079	0.10	+0.2
2,520,554	-		Sama_2079	0.10	+0.6
2,520,555	+		Sama_2079	0.10	+0.7
2,520,743	+		Sama_2079	0.20	+1.3
2,520,743	+		Sama_2079	0.20	-0.2
2,520,769	+		Sama_2079	0.21	+0.9
2,520,769	+		Sama_2079	0.21	+0.5
2,520,769	+		Sama_2079	0.21	-0.3
2,520,769	+		Sama_2079	0.21	+2.8
2,520,769	+		Sama_2079	0.21	-0.2
2,520,770	-		Sama_2079	0.21	-0.1
2,520,770	-		Sama_2079	0.21	-0.2
2,520,770	-		Sama_2079	0.21	+0.9
2,520,770	-		Sama_2079	0.21	-0.4
2,520,770	-		Sama_2079	0.21	+1.0
2,520,770	-		Sama_2079	0.21	+0.1
2,520,770	-		Sama_2079	0.21	+0.1
2,520,770	-		Sama_2079	0.21	+0.6
2,520,770	-		Sama_2079	0.21	+0.8
2,520,771	+		Sama_2079	0.21	+1.1
2,520,771	+		Sama_2079	0.21	+0.1
2,520,772	-		Sama_2079	0.21	+0.5
2,520,821	+		Sama_2079	0.24	+1.3
2,520,821	+		Sama_2079	0.24	+0.6
2,520,821	+		Sama_2079	0.24	+0.1
2,520,821	+		Sama_2079	0.24	-0.4
2,520,822	-		Sama_2079	0.24	-0.1
2,520,822	-		Sama_2079	0.24	+0.4
2,520,822	-		Sama_2079	0.24	+0.9
2,520,999	-		Sama_2079	0.33	+0.9
2,520,999	-		Sama_2079	0.33	+0.6
2,521,009	-		Sama_2079	0.33	+0.5
2,521,145	-		Sama_2079	0.40	-1.4
2,521,146	+		Sama_2079	0.40	-1.8
2,521,146	+		Sama_2079	0.40	+0.8
2,521,147	-		Sama_2079	0.40	+0.4
2,521,198	+		Sama_2079	0.43	+2.9
2,521,207	+		Sama_2079	0.43	+0.3
2,521,207	+		Sama_2079	0.43	-0.4
2,521,215	+		Sama_2079	0.44	+1.1
2,521,216	-		Sama_2079	0.44	-0.5
2,521,228	+		Sama_2079	0.45	+0.2
2,521,228	+		Sama_2079	0.45	+1.1
2,521,228	+		Sama_2079	0.45	-0.1
2,521,228	+		Sama_2079	0.45	+0.3
2,521,228	+		Sama_2079	0.45	-0.4
2,521,229	-		Sama_2079	0.45	+0.2
2,521,229	-		Sama_2079	0.45	+0.2
2,521,229	-		Sama_2079	0.45	+0.3
2,521,229	-		Sama_2079	0.45	+0.5
2,521,229	-		Sama_2079	0.45	+2.6
2,521,240	+		Sama_2079	0.45	+0.4
2,521,241	-		Sama_2079	0.45	-0.6
2,521,258	+		Sama_2079	0.46	+0.5
2,521,300	+		Sama_2079	0.48	+0.0
2,521,300	+		Sama_2079	0.48	+0.4
2,521,301	-		Sama_2079	0.48	+1.2
2,521,301	-		Sama_2079	0.48	+0.8
2,521,341	+		Sama_2079	0.50	+0.5
2,521,414	-		Sama_2079	0.54	+0.6
2,521,420	+		Sama_2079	0.54	+0.1
2,521,421	-		Sama_2079	0.54	+0.6
2,521,432	-		Sama_2079	0.55	+0.6
2,521,500	+		Sama_2079	0.58	+0.6
2,521,500	+		Sama_2079	0.58	-2.0
2,521,501	-		Sama_2079	0.59	+0.9
2,521,501	-		Sama_2079	0.59	-1.0
2,521,550	-		Sama_2079	0.61	+1.8
2,521,590	+		Sama_2079	0.63	-0.1
2,521,716	+		Sama_2079	0.70	+0.7
2,521,716	+		Sama_2079	0.70	-0.4
2,521,717	-		Sama_2079	0.70	-0.5
2,521,719	+		Sama_2079	0.70	+0.0
2,521,719	+		Sama_2079	0.70	+1.0
2,521,719	+		Sama_2079	0.70	+1.0
2,521,782	+		Sama_2079	0.73	+0.5
2,521,788	-		Sama_2079	0.73	+0.6
2,521,790	-		Sama_2079	0.73	+0.2
2,521,843	+		Sama_2079	0.76	-0.1
2,521,843	+		Sama_2079	0.76	+1.1
2,521,844	-		Sama_2079	0.76	-0.5
2,521,844	-		Sama_2079	0.76	-0.4
2,521,844	-		Sama_2079	0.76	+0.7
2,521,885	+		Sama_2079	0.78	+0.0
2,521,885	+		Sama_2079	0.78	+0.2
2,521,968	-		Sama_2079	0.82	-0.8
2,521,968	-		Sama_2079	0.82	+0.4
2,522,031	+		Sama_2079	0.86	+0.3
2,522,031	+		Sama_2079	0.86	-0.2
2,522,031	+		Sama_2079	0.86	+0.5
2,522,032	-		Sama_2079	0.86	+1.0
2,522,035	+		Sama_2079	0.86	+1.5
2,522,035	+		Sama_2079	0.86	+0.9
2,522,035	+		Sama_2079	0.86	-0.4
2,522,035	+		Sama_2079	0.86	+1.0
2,522,035	+		Sama_2079	0.86	-0.1
2,522,035	+		Sama_2079	0.86	+1.1
2,522,035	+		Sama_2079	0.86	+0.7
2,522,035	+		Sama_2079	0.86	+0.8
2,522,035	+		Sama_2079	0.86	+1.2
2,522,035	+		Sama_2079	0.86	+0.6
2,522,036	-		Sama_2079	0.86	+0.3
2,522,036	-		Sama_2079	0.86	+0.5
2,522,036	-		Sama_2079	0.86	+0.6
2,522,041	+		Sama_2079	0.86	+0.4
2,522,041	+		Sama_2079	0.86	+0.3
2,522,041	+		Sama_2079	0.86	-0.4
2,522,041	+		Sama_2079	0.86	+0.6
2,522,042	-		Sama_2079	0.86	+1.1
2,522,042	-		Sama_2079	0.86	+0.6
2,522,042	-		Sama_2079	0.86	-0.1
2,522,042	-		Sama_2079	0.86	-1.5
2,522,109	+		Sama_2079	0.90	+1.9
2,522,109	+		Sama_2079	0.90	-0.5
2,522,110	-		Sama_2079	0.90	+0.6
2,522,110	-		Sama_2079	0.90	+0.2
2,522,346	-				+0.8
2,522,394	+				+0.5
2,522,394	+				-0.7
2,522,426	+				-0.4
2,522,483	-				-0.2
2,522,483	-				-0.9
2,522,533	+				-1.2
2,522,563	+				-1.2
2,522,564	-				+1.3
2,522,564	-				+0.3
2,522,564	-				-0.1
2,522,651	-		Sama_2080	0.13	+0.0
2,522,732	+		Sama_2080	0.18	-0.7
2,522,928	+		Sama_2080	0.29	+0.0
2,522,928	+		Sama_2080	0.29	+0.1
2,522,928	+		Sama_2080	0.29	-0.3
2,522,928	+		Sama_2080	0.29	+1.6
2,522,929	-		Sama_2080	0.29	+0.5
2,522,929	-		Sama_2080	0.29	+0.2
2,522,930	+		Sama_2080	0.29	-0.2
2,522,987	+		Sama_2080	0.32	+0.3
2,522,988	-		Sama_2080	0.32	+0.2
2,522,988	-		Sama_2080	0.32	+0.3
2,522,988	-		Sama_2080	0.32	-0.2
2,523,018	-		Sama_2080	0.34	-1.0
2,523,028	-		Sama_2080	0.35	+0.3
2,523,028	-		Sama_2080	0.35	-0.2
2,523,028	-		Sama_2080	0.35	+2.6
2,523,072	-		Sama_2080	0.37	+1.0
2,523,132	-		Sama_2080	0.41	+0.6
2,523,146	+		Sama_2080	0.41	-0.5
2,523,178	+		Sama_2080	0.43	-0.0
2,523,178	+		Sama_2080	0.43	+0.6
2,523,179	-		Sama_2080	0.43	-1.7
2,523,179	-		Sama_2080	0.43	-0.1
2,523,212	+		Sama_2080	0.45	-2.6
2,523,212	+		Sama_2080	0.45	+0.6
2,523,278	+		Sama_2080	0.49	+0.0
2,523,278	+		Sama_2080	0.49	+0.6
2,523,278	+		Sama_2080	0.49	+0.4
2,523,279	-		Sama_2080	0.49	+0.6
2,523,279	-		Sama_2080	0.49	+0.4
2,523,279	-		Sama_2080	0.49	-0.4