Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0927

Experiment: LB 30C timecourse1 timepoint 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 3
1,004,122	+		Psest_0926	0.11	-1.8
1,004,123	-		Psest_0926	0.11	-0.3
1,004,150	+		Psest_0926	0.14	-1.2
1,004,150	+		Psest_0926	0.14	-0.6
1,004,151	-		Psest_0926	0.14	-0.6
1,004,220	+		Psest_0926	0.22	+0.9
1,004,220	+		Psest_0926	0.22	+0.1
1,004,221	-		Psest_0926	0.22	-0.7
1,004,221	-		Psest_0926	0.22	+0.2
1,004,221	-		Psest_0926	0.22	-0.8
1,004,240	-		Psest_0926	0.24	-0.4
1,004,297	-		Psest_0926	0.30	-0.5
1,004,317	-		Psest_0926	0.32	+0.2
1,004,317	-		Psest_0926	0.32	+1.5
1,004,317	-		Psest_0926	0.32	-0.2
1,004,368	+		Psest_0926	0.38	-1.2
1,004,369	-		Psest_0926	0.38	-0.9
1,004,369	-		Psest_0926	0.38	-1.4
1,004,431	+		Psest_0926	0.44	-0.4
1,004,431	+		Psest_0926	0.44	+0.9
1,004,432	-		Psest_0926	0.45	-0.9
1,004,512	+		Psest_0926	0.53	+0.9
1,004,545	-		Psest_0926	0.57	+1.3
1,004,628	+		Psest_0926	0.66	-1.6
1,004,629	-		Psest_0926	0.66	-0.7
1,004,629	-		Psest_0926	0.66	-0.6
1,004,723	+		Psest_0926	0.76	-0.9
1,004,753	-		Psest_0926	0.79	-0.7
1,004,753	-		Psest_0926	0.79	-1.3
1,005,032	+				-0.7
1,005,032	+				+0.7
1,005,033	-				-0.4
1,005,033	-				+1.2
1,005,033	-				-0.6
1,005,066	-				+0.2
1,005,082	-				+0.4
1,005,137	+				-1.0
1,005,224	+		Psest_0927	0.17	-0.6
1,005,265	+		Psest_0927	0.21	+0.6
1,005,265	+		Psest_0927	0.21	-0.7
1,005,265	+		Psest_0927	0.21	+0.5
1,005,321	+		Psest_0927	0.26	-1.4
1,005,321	+		Psest_0927	0.26	+0.6
1,005,321	+		Psest_0927	0.26	-1.1
1,005,321	+		Psest_0927	0.26	-0.2
1,005,322	-		Psest_0927	0.26	-2.6
1,005,322	-		Psest_0927	0.26	+0.6
1,005,322	-		Psest_0927	0.26	-0.3
1,005,322	-		Psest_0927	0.26	-1.3
1,005,322	-		Psest_0927	0.26	-0.6
1,005,351	+		Psest_0927	0.29	-1.4
1,005,351	+		Psest_0927	0.29	-1.7
1,005,351	+		Psest_0927	0.29	-1.2
1,005,351	+		Psest_0927	0.29	+0.4
1,005,352	-		Psest_0927	0.29	+1.2
1,005,352	-		Psest_0927	0.29	-1.1
1,005,380	+		Psest_0927	0.32	-1.6
1,005,380	+		Psest_0927	0.32	-0.8
1,005,380	+		Psest_0927	0.32	-0.2
1,005,381	-		Psest_0927	0.32	-0.2
1,005,381	-		Psest_0927	0.32	+1.3
1,005,381	-		Psest_0927	0.32	-1.3
1,005,682	+		Psest_0927	0.62	-0.5
1,005,682	+		Psest_0927	0.62	-1.8
1,005,682	+		Psest_0927	0.62	-3.1
1,005,682	+		Psest_0927	0.62	+0.3
1,005,683	-		Psest_0927	0.62	-0.2
1,005,741	+		Psest_0927	0.68	+0.2
1,005,741	+		Psest_0927	0.68	-0.2
1,005,741	+		Psest_0927	0.68	-3.3
1,005,741	+		Psest_0927	0.68	-0.5
1,005,741	+		Psest_0927	0.68	+0.4
1,005,742	-		Psest_0927	0.68	-1.5
1,005,742	-		Psest_0927	0.68	-1.2
1,005,742	-		Psest_0927	0.68	+0.5
1,005,742	-		Psest_0927	0.68	-0.8
1,005,742	-		Psest_0927	0.68	+0.2
1,005,742	-		Psest_0927	0.68	-0.1
1,005,742	-		Psest_0927	0.68	-1.1
1,005,742	-		Psest_0927	0.68	+0.0
1,005,879	+		Psest_0927	0.81	+0.9
1,005,953	+		Psest_0927	0.89	-0.6
1,005,953	+		Psest_0927	0.89	+0.1
1,005,953	+		Psest_0927	0.89	+0.2
1,005,954	-		Psest_0927	0.89	-0.2
1,005,954	-		Psest_0927	0.89	-1.0
1,005,954	-		Psest_0927	0.89	+0.1
1,005,954	-		Psest_0927	0.89	-0.4
1,005,954	-		Psest_0927	0.89	-1.5
1,005,954	-		Psest_0927	0.89	-0.8
1,006,071	-				+0.3
1,006,071	-				-3.2
1,006,071	-				+2.8
1,006,071	-				-1.7
1,006,245	+		Psest_0928	0.11	-0.6
1,006,246	-		Psest_0928	0.11	-1.0
1,006,246	-		Psest_0928	0.11	+0.2
1,006,301	-		Psest_0928	0.16	-0.3
1,006,301	-		Psest_0928	0.16	+0.4
1,006,301	-		Psest_0928	0.16	-0.8
1,006,610	+		Psest_0928	0.42	-0.7
1,006,610	+		Psest_0928	0.42	+0.1
1,006,610	+		Psest_0928	0.42	+0.2
1,006,610	+		Psest_0928	0.42	-0.6
1,006,610	+		Psest_0928	0.42	-0.5
1,006,610	+		Psest_0928	0.42	-1.6
1,006,610	+		Psest_0928	0.42	-0.6
1,006,610	+		Psest_0928	0.42	+0.5
1,006,610	+		Psest_0928	0.42	+0.4
1,006,610	+		Psest_0928	0.42	+0.5
1,006,610	+		Psest_0928	0.42	+0.1
1,006,611	-		Psest_0928	0.42	+0.2
1,006,611	-		Psest_0928	0.42	+0.0
1,006,611	-		Psest_0928	0.42	-0.1
1,006,611	-		Psest_0928	0.42	-0.5
1,006,611	-		Psest_0928	0.42	+0.1
1,006,611	-		Psest_0928	0.42	-0.0
1,006,611	-		Psest_0928	0.42	-0.8
1,006,611	-		Psest_0928	0.42	-0.6
1,006,611	-		Psest_0928	0.42	-1.1
1,006,611	-		Psest_0928	0.42	-0.3
1,006,611	-		Psest_0928	0.42	-1.0
1,006,611	-		Psest_0928	0.42	-0.4
1,006,611	-		Psest_0928	0.42	-0.3
1,006,662	-		Psest_0928	0.47	+0.2
1,006,892	+		Psest_0928	0.66	-1.3
1,006,892	+		Psest_0928	0.66	-1.0
1,006,892	+		Psest_0928	0.66	-0.1
1,006,892	+		Psest_0928	0.66	-0.4
1,006,892	+		Psest_0928	0.66	-0.9
1,006,892	+		Psest_0928	0.66	-0.3
1,006,892	+		Psest_0928	0.66	-1.7
1,006,892	+		Psest_0928	0.66	-0.9
1,006,892	+		Psest_0928	0.66	-0.1
1,006,893	-		Psest_0928	0.66	-0.0
1,006,893	-		Psest_0928	0.66	+2.9
1,006,893	-		Psest_0928	0.66	-1.0
1,006,893	-		Psest_0928	0.66	-0.4
1,006,893	-		Psest_0928	0.66	-0.1
1,006,893	-		Psest_0928	0.66	-0.2
1,007,061	-		Psest_0928	0.80	-0.5