Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3925

Experiment: LB 30C timecourse1 timepoint 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 3
4,093,167	+		Psest_3924	0.45	+0.0
4,093,167	+		Psest_3924	0.45	+1.0
4,093,167	+		Psest_3924	0.45	+1.3
4,093,167	+		Psest_3924	0.45	-1.0
4,093,197	+		Psest_3924	0.47	+0.5
4,093,197	+		Psest_3924	0.47	-2.4
4,093,197	+		Psest_3924	0.47	-1.3
4,093,197	+		Psest_3924	0.47	+0.5
4,093,200	+		Psest_3924	0.47	+1.3
4,093,200	+		Psest_3924	0.47	+0.3
4,093,200	+		Psest_3924	0.47	+0.1
4,093,200	+		Psest_3924	0.47	+0.0
4,093,200	+		Psest_3924	0.47	-2.3
4,093,200	+		Psest_3924	0.47	-0.3
4,093,200	+		Psest_3924	0.47	-2.1
4,093,200	+		Psest_3924	0.47	-0.9
4,093,200	+		Psest_3924	0.47	+1.5
4,093,200	+		Psest_3924	0.47	+1.1
4,093,200	+		Psest_3924	0.47	-1.3
4,093,200	+		Psest_3924	0.47	-0.3
4,093,200	+		Psest_3924	0.47	+0.0
4,093,200	+		Psest_3924	0.47	+1.0
4,093,200	+		Psest_3924	0.47	+0.0
4,093,200	+		Psest_3924	0.47	-1.0
4,093,201	-		Psest_3924	0.48	-1.5
4,093,201	-		Psest_3924	0.48	+1.0
4,093,201	-		Psest_3924	0.48	+0.5
4,093,201	-		Psest_3924	0.48	+0.6
4,093,201	-		Psest_3924	0.48	-1.0
4,093,201	-		Psest_3924	0.48	-1.0
4,093,201	-		Psest_3924	0.48	+0.7
4,093,201	-		Psest_3924	0.48	-1.0
4,093,201	-		Psest_3924	0.48	-1.8
4,093,201	-		Psest_3924	0.48	-0.3
4,093,201	-		Psest_3924	0.48	-0.1
4,093,201	-		Psest_3924	0.48	+0.6
4,093,201	-		Psest_3924	0.48	-0.0
4,093,201	-		Psest_3924	0.48	-1.0
4,093,201	-		Psest_3924	0.48	+0.5
4,093,201	-		Psest_3924	0.48	+0.0
4,093,280	+		Psest_3924	0.54	-0.5
4,093,446	+		Psest_3924	0.66	+0.0
4,093,447	-		Psest_3924	0.66	-0.7
4,093,629	+		Psest_3924	0.80	-1.0
4,093,629	+		Psest_3924	0.80	+0.0
4,093,629	+		Psest_3924	0.80	+1.0
4,093,629	+		Psest_3924	0.80	+2.4
4,093,629	+		Psest_3924	0.80	-0.7
4,093,630	-		Psest_3924	0.80	-1.0
4,093,630	-		Psest_3924	0.80	+0.2
4,093,630	-		Psest_3924	0.80	-0.8
4,093,630	-		Psest_3924	0.80	+0.0
4,093,630	-		Psest_3924	0.80	-2.3
4,093,978	+				-1.5
4,093,978	+				-0.0
4,093,979	-				+0.0
4,093,979	-				+1.2
4,093,979	-				+0.5
4,094,089	-				+1.4
4,094,173	-		Psest_3925	0.13	+0.3
4,094,173	-		Psest_3925	0.13	-0.2
4,094,260	-		Psest_3925	0.18	+0.0
4,094,647	-		Psest_3925	0.42	+1.8
4,095,126	-		Psest_3925	0.71	-1.0
4,095,127	+		Psest_3925	0.71	+0.3
4,095,127	+		Psest_3925	0.71	+2.0
4,095,127	+		Psest_3925	0.71	+0.3
4,095,322	+		Psest_3925	0.83	+1.3
4,095,323	-		Psest_3925	0.83	+0.0
4,095,323	-		Psest_3925	0.83	+1.5
4,095,323	-		Psest_3925	0.83	+2.6
4,095,446	-				-0.4
4,095,446	-				-1.8
4,095,686	+				+1.1
4,095,687	-				+2.2
4,095,687	-				+0.6
4,095,693	+				+0.2
4,095,757	+				-0.5
4,095,758	-				-0.7
4,095,786	-				-2.0
4,095,823	+				-0.7
4,095,856	+				-1.0
4,095,856	+				-0.4
4,095,856	+				-1.0
4,095,857	-				+0.5
4,095,857	-				+0.6
4,096,003	+				-1.1
4,096,003	+				+1.0
4,096,003	+				-0.8
4,096,003	+				-0.7
4,096,004	-				-0.1
4,096,004	-				+0.2
4,096,004	-				-0.0
4,096,004	-				-1.3
4,096,004	-				+1.5
4,096,004	-				-1.8
4,096,219	+		Psest_3926	0.14	-1.7
4,096,219	+		Psest_3926	0.14	-2.3
4,096,219	+		Psest_3926	0.14	-0.2
4,096,219	+		Psest_3926	0.14	-1.1
4,096,220	-		Psest_3926	0.14	-3.0
4,096,220	-		Psest_3926	0.14	-1.8
4,096,220	-		Psest_3926	0.14	-0.1
4,096,279	+		Psest_3926	0.18	-2.0
4,096,453	+		Psest_3926	0.27	-1.3
4,096,453	+		Psest_3926	0.27	-1.5
4,096,453	+		Psest_3926	0.27	-0.3
4,096,453	+		Psest_3926	0.27	-1.8
4,096,453	+		Psest_3926	0.27	-2.4
4,096,453	+		Psest_3926	0.27	-1.3
4,096,454	-		Psest_3926	0.27	+0.9
4,096,454	-		Psest_3926	0.27	-1.8
4,096,454	-		Psest_3926	0.27	-0.5
4,096,454	-		Psest_3926	0.27	-2.0
4,096,576	+		Psest_3926	0.34	+0.4
4,096,577	-		Psest_3926	0.34	-1.3