Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3403

Experiment: LB 30C timecourse1 timepoint 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 3
3,569,847	+		Psest_3401	0.76	-0.6
3,569,847	+		Psest_3401	0.76	-1.5
3,569,848	-		Psest_3401	0.77	-0.2
3,569,848	-		Psest_3401	0.77	+1.5
3,569,848	-		Psest_3401	0.77	-0.4
3,570,273	-		Psest_3402	0.28	+0.4
3,570,531	-				-0.5
3,570,569	+				-0.2
3,570,570	-				-1.5
3,570,570	-				-2.7
3,570,571	+				-1.1
3,570,571	+				-0.1
3,570,571	+				-1.5
3,570,571	+				-1.4
3,570,571	+				-0.9
3,570,571	+				+0.0
3,570,572	-				-0.6
3,570,701	-		Psest_3403	0.23	-0.7
3,570,701	-		Psest_3403	0.23	-2.2
3,570,701	-		Psest_3403	0.23	-0.7
3,570,701	-		Psest_3403	0.23	+1.7
3,570,701	-		Psest_3403	0.23	-0.6
3,570,763	+		Psest_3403	0.36	+0.3
3,570,763	+		Psest_3403	0.36	-0.4
3,570,763	+		Psest_3403	0.36	-1.0
3,570,763	+		Psest_3403	0.36	-1.0
3,570,763	+		Psest_3403	0.36	-0.9
3,570,763	+		Psest_3403	0.36	-0.3
3,570,764	-		Psest_3403	0.36	+0.6
3,570,767	+		Psest_3403	0.37	-1.1
3,570,768	-		Psest_3403	0.37	-0.1
3,570,768	-		Psest_3403	0.37	-0.0
3,570,768	-		Psest_3403	0.37	-2.9
3,570,768	-		Psest_3403	0.37	-0.4
3,570,784	+		Psest_3403	0.40	+0.1
3,570,784	+		Psest_3403	0.40	-1.1
3,570,784	+		Psest_3403	0.40	-1.3
3,570,784	+		Psest_3403	0.40	-2.1
3,570,785	-		Psest_3403	0.41	-0.1
3,570,788	+		Psest_3403	0.41	+0.4
3,570,788	+		Psest_3403	0.41	-2.0
3,570,789	-		Psest_3403	0.42	+1.7
3,570,789	-		Psest_3403	0.42	+0.2
3,570,789	-		Psest_3403	0.42	+0.3
3,570,789	-		Psest_3403	0.42	-1.9
3,570,794	+		Psest_3403	0.43	-0.1
3,570,794	+		Psest_3403	0.43	-2.1
3,570,794	+		Psest_3403	0.43	-0.1
3,570,795	-		Psest_3403	0.43	-0.2
3,570,795	-		Psest_3403	0.43	-0.5
3,570,795	-		Psest_3403	0.43	-0.4
3,570,795	-		Psest_3403	0.43	+0.0
3,570,934	+		Psest_3403	0.73	-0.1
3,570,934	+		Psest_3403	0.73	-0.4
3,570,935	-		Psest_3403	0.73	-2.1
3,570,935	-		Psest_3403	0.73	-1.0
3,570,935	-		Psest_3403	0.73	-0.4
3,570,935	-		Psest_3403	0.73	-0.9
3,571,012	+				-0.4
3,571,012	+				-0.7
3,571,012	+				-1.2
3,571,012	+				+1.0
3,571,012	+				+0.3
3,571,013	-				-0.6
3,571,013	-				-1.1
3,571,013	-				-1.0
3,571,013	-				-0.5
3,571,013	-				-0.2
3,571,058	+				+1.1
3,571,058	+				-1.5
3,571,059	-				-0.9
3,571,059	-				+0.2
3,571,059	-				-3.2
3,571,059	-				-1.9
3,571,155	+				-0.4
3,571,156	-				-0.3
3,571,204	+				-3.1
3,571,204	+				-0.2
3,571,205	-				-1.3
3,571,205	-				-1.0
3,571,205	-				+0.4
3,571,205	-				+1.1
3,571,205	-				+1.2