Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3159

Experiment: LB 30C timecourse1 timepoint 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 3
3,327,571	+				-1.1
3,327,571	+				-2.1
3,327,680	+				-0.8
3,327,684	+				-0.6
3,327,685	-				-0.5
3,327,739	+				-1.2
3,327,739	+				+0.2
3,327,739	+				+0.8
3,327,740	-				-1.0
3,327,740	-				+1.0
3,327,740	-				-0.4
3,327,786	+				+0.2
3,327,787	-				-0.7
3,327,820	-		Psest_3158	0.17	-0.4
3,327,848	+		Psest_3158	0.26	+1.0
3,327,848	+		Psest_3158	0.26	+0.5
3,327,848	+		Psest_3158	0.26	-0.2
3,327,848	+		Psest_3158	0.26	+0.2
3,327,848	+		Psest_3158	0.26	-0.9
3,327,849	-		Psest_3158	0.27	-0.7
3,327,849	-		Psest_3158	0.27	-0.1
3,327,849	-		Psest_3158	0.27	+0.4
3,327,879	+		Psest_3158	0.36	+0.6
3,327,924	-		Psest_3158	0.51	+0.4
3,328,045	+		Psest_3158	0.89	-0.2
3,328,091	+				-0.6
3,328,103	-				-0.8
3,328,129	+				-0.6
3,328,129	+				-1.6
3,328,130	-				-0.9
3,328,161	+				-0.5
3,328,161	+				+2.4
3,328,161	+				-0.9
3,328,161	+				-1.4
3,328,162	-				-1.2
3,328,359	+				-0.9
3,328,359	+				+0.4
3,328,360	-				-1.3
3,328,360	-				-0.7
3,328,375	+				+0.4
3,328,375	+				-1.8
3,328,392	-				-0.6
3,328,392	-				+0.6
3,328,392	-				+0.1
3,328,628	+				-1.6
3,328,884	+		Psest_3159	0.11	-3.2
3,329,072	-		Psest_3159	0.15	-3.5
3,329,260	+		Psest_3159	0.20	-1.1
3,329,261	-		Psest_3159	0.20	-2.9
3,329,261	-		Psest_3159	0.20	-3.1
3,329,261	-		Psest_3159	0.20	-2.7
3,329,390	-		Psest_3159	0.24	-2.7
3,329,390	-		Psest_3159	0.24	-2.3
3,329,466	+		Psest_3159	0.26	-2.8
3,329,467	-		Psest_3159	0.26	-1.6
3,329,467	-		Psest_3159	0.26	-3.2
3,329,467	-		Psest_3159	0.26	-2.7
3,329,827	+		Psest_3159	0.35	-2.1
3,329,827	+		Psest_3159	0.35	-2.3
3,329,827	+		Psest_3159	0.35	-2.3
3,329,828	-		Psest_3159	0.35	-3.3
3,329,828	-		Psest_3159	0.35	-1.5
3,329,829	+		Psest_3159	0.35	+0.5
3,329,829	+		Psest_3159	0.35	-1.9
3,329,830	-		Psest_3159	0.35	-2.5
3,329,830	-		Psest_3159	0.35	-3.3
3,329,830	-		Psest_3159	0.35	-0.2
3,329,830	-		Psest_3159	0.35	-2.2
3,329,830	-		Psest_3159	0.35	-3.5
3,330,112	+		Psest_3159	0.42	-3.8
3,330,113	-		Psest_3159	0.42	-3.3
3,330,113	-		Psest_3159	0.42	-2.5
3,330,305	-		Psest_3159	0.47	-1.6
3,330,305	-		Psest_3159	0.47	-2.1
3,330,305	-		Psest_3159	0.47	-3.8
3,330,717	+		Psest_3159	0.58	-2.3
3,330,717	+		Psest_3159	0.58	-2.9
3,330,718	-		Psest_3159	0.58	-2.9
3,330,718	-		Psest_3159	0.58	-3.0
3,330,721	+		Psest_3159	0.58	-1.4
3,330,722	-		Psest_3159	0.58	-1.8
3,331,316	-		Psest_3159	0.73	-3.8
3,331,316	-		Psest_3159	0.73	-3.2
3,331,509	-		Psest_3159	0.78	-3.9
3,331,606	+		Psest_3159	0.80	-3.6
3,331,606	+		Psest_3159	0.80	-2.5
3,331,607	-		Psest_3159	0.80	-1.7
3,331,614	+		Psest_3159	0.81	-0.8
3,331,639	+		Psest_3159	0.81	-2.9
3,331,640	-		Psest_3159	0.81	-3.3
3,331,807	+		Psest_3159	0.86	-2.6
3,331,807	+		Psest_3159	0.86	-3.5
3,332,032	+				-2.6
3,332,032	+				-1.2
3,332,033	-				-1.8
3,332,033	-				-3.7
3,332,033	-				-2.8
3,332,033	-				-2.8
3,332,033	-				-3.7
3,332,208	+				-2.7
3,332,208	+				-3.3
3,332,208	+				-2.7
3,332,269	+				-3.8
3,332,406	+				-4.0
3,332,406	+				-2.9
3,332,406	+				-2.9
3,332,406	+				-4.0
3,332,406	+				-2.9
3,332,406	+				-2.5
3,332,407	-				-4.9
3,332,407	-				-3.5
3,332,407	-				-2.3
3,332,407	-				-3.0
3,332,407	-				-1.3
3,332,407	-				-1.2
3,332,407	-				-2.7
3,332,407	-				+0.8
3,332,407	-				-1.9
3,332,407	-				-3.0
3,332,407	-				-1.1
3,332,407	-				-0.1
3,332,411	+				-1.1
3,332,411	+				-0.3
3,332,686	+		Psest_3160	0.25	+0.2
3,333,259	+				-1.2
3,333,259	+				+0.0
3,333,259	+				-1.5
3,333,259	+				+1.0
3,333,259	+				-0.3
3,333,259	+				-1.2
3,333,259	+				-0.3
3,333,259	+				-0.6
3,333,259	+				-0.1
3,333,259	+				-0.9
3,333,259	+				+0.4
3,333,259	+				-1.4
3,333,259	+				-1.1
3,333,259	+				-0.8
3,333,259	+				-1.5
3,333,260	-				-0.5
3,333,260	-				+2.1
3,333,260	-				+1.5
3,333,260	-				-1.0
3,333,260	-				-0.8
3,333,260	-				-0.4
3,333,260	-				+0.3
3,333,260	-				-0.0
3,333,260	-				+0.5
3,333,260	-				+0.1
3,333,260	-				-1.3
3,333,260	-				-0.5
3,333,270	+				-1.0
3,333,270	+				-2.4
3,333,271	-				+1.0
3,333,271	-				-0.3
3,333,345	+				+0.2
3,333,345	+				+0.2
3,333,345	+				-0.5
3,333,345	+				-0.1
3,333,345	+				+0.7
3,333,346	-				+0.1
3,333,346	-				-0.0
3,333,366	+				+0.1