Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2339

Experiment: LB 30C timecourse1 timepoint 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 3
2,491,963	+		Psest_2338	0.63	+1.4
2,491,998	-		Psest_2338	0.64	+0.5
2,492,020	+		Psest_2338	0.65	+0.1
2,492,020	+		Psest_2338	0.65	+0.0
2,492,021	-		Psest_2338	0.65	+0.4
2,492,021	-		Psest_2338	0.65	-0.1
2,492,021	-		Psest_2338	0.65	-0.7
2,492,330	+		Psest_2338	0.78	+2.1
2,492,330	+		Psest_2338	0.78	+1.1
2,492,331	-		Psest_2338	0.78	+0.8
2,492,375	+		Psest_2338	0.80	+0.4
2,492,375	+		Psest_2338	0.80	-0.9
2,492,375	+		Psest_2338	0.80	-0.9
2,492,376	-		Psest_2338	0.80	+0.9
2,492,376	-		Psest_2338	0.80	-0.1
2,492,376	-		Psest_2338	0.80	+0.5
2,492,376	-		Psest_2338	0.80	+1.0
2,492,376	-		Psest_2338	0.80	+0.4
2,492,376	-		Psest_2338	0.80	-0.9
2,492,376	-		Psest_2338	0.80	-0.9
2,492,376	-		Psest_2338	0.80	+0.7
2,492,376	-		Psest_2338	0.80	+1.1
2,492,376	-		Psest_2338	0.80	-0.3
2,492,472	+		Psest_2338	0.83	-0.9
2,492,522	+		Psest_2338	0.85	-0.5
2,492,522	+		Psest_2338	0.85	-0.9
2,492,522	+		Psest_2338	0.85	+0.6
2,492,523	-		Psest_2338	0.85	+0.7
2,492,523	-		Psest_2338	0.85	-2.0
2,492,738	+				-0.3
2,492,738	+				+0.3
2,492,744	+				-1.5
2,492,744	+				+0.3
2,492,745	-				+0.4
2,492,788	-				-0.0
2,492,872	-				+1.1
2,492,894	-				+0.5
2,493,095	+		Psest_2339	0.34	-3.0
2,493,095	+		Psest_2339	0.34	-0.4
2,493,095	+		Psest_2339	0.34	-1.2
2,493,096	-		Psest_2339	0.34	-0.5
2,493,096	-		Psest_2339	0.34	+1.5
2,493,096	-		Psest_2339	0.34	-0.7
2,493,096	-		Psest_2339	0.34	+2.4
2,493,101	+		Psest_2339	0.35	+2.1
2,493,101	+		Psest_2339	0.35	+1.1
2,493,139	-		Psest_2339	0.43	+1.7
2,493,209	+		Psest_2339	0.57	-0.2
2,493,209	+		Psest_2339	0.57	-0.5
2,493,209	+		Psest_2339	0.57	+0.9
2,493,209	+		Psest_2339	0.57	+1.3
2,493,210	-		Psest_2339	0.57	-0.1
2,493,210	-		Psest_2339	0.57	+0.5
2,493,210	-		Psest_2339	0.57	+0.1
2,493,379	+				-1.5
2,493,398	+				+0.5
2,493,399	-				-0.3
2,493,545	+				-0.2
2,493,669	-				-1.7
2,493,669	-				-1.2
2,493,802	-				+1.1
2,493,802	-				-0.1
2,493,802	-				-2.6
2,493,942	+		Psest_2340	0.22	-0.9
2,493,942	+		Psest_2340	0.22	-2.5
2,493,942	+		Psest_2340	0.22	+0.5
2,493,942	+		Psest_2340	0.22	-1.3
2,493,942	+		Psest_2340	0.22	+0.6
2,493,942	+		Psest_2340	0.22	+0.5
2,493,942	+		Psest_2340	0.22	+0.4
2,493,942	+		Psest_2340	0.22	+1.1
2,493,942	+		Psest_2340	0.22	-1.1
2,493,942	+		Psest_2340	0.22	+0.3
2,493,942	+		Psest_2340	0.22	+0.8
2,493,942	+		Psest_2340	0.22	+0.1
2,493,942	+		Psest_2340	0.22	+1.7
2,493,943	-		Psest_2340	0.22	-0.2
2,493,943	-		Psest_2340	0.22	-0.2
2,493,943	-		Psest_2340	0.22	-0.3
2,493,943	-		Psest_2340	0.22	+0.1
2,493,943	-		Psest_2340	0.22	-1.5
2,493,968	+		Psest_2340	0.25	-0.6
2,494,143	-		Psest_2340	0.44	-0.3
2,494,380	+		Psest_2340	0.69	-0.1
2,494,380	+		Psest_2340	0.69	-0.0
2,494,380	+		Psest_2340	0.69	+1.3
2,494,380	+		Psest_2340	0.69	-0.0
2,494,380	+		Psest_2340	0.69	-1.0
2,494,380	+		Psest_2340	0.69	-0.2
2,494,380	+		Psest_2340	0.69	-0.5
2,494,380	+		Psest_2340	0.69	+0.4
2,494,380	+		Psest_2340	0.69	+1.0
2,494,381	-		Psest_2340	0.69	-0.9
2,494,381	-		Psest_2340	0.69	+1.6
2,494,381	-		Psest_2340	0.69	-0.2
2,494,381	-		Psest_2340	0.69	-1.9
2,494,381	-		Psest_2340	0.69	+0.7
2,494,381	-		Psest_2340	0.69	+0.3
2,494,401	+		Psest_2340	0.71	+0.9
2,494,402	-		Psest_2340	0.71	+2.4
2,494,402	-		Psest_2340	0.71	-2.4
2,494,402	-		Psest_2340	0.71	+0.4
2,494,402	-		Psest_2340	0.71	+0.5
2,494,405	-		Psest_2340	0.72	-0.3
2,494,405	-		Psest_2340	0.72	+0.3