Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1263

Experiment: LB 30C timecourse1 timepoint 3

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_1262 and Psest_1263 are separated by 16 nucleotidesPsest_1263 and Psest_1264 are separated by 27 nucleotidesPsest_1264 and Psest_1265 are separated by 0 nucleotides Psest_1262: Psest_1262 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, at 1,366,840 to 1,367,952 _1262 Psest_1263: Psest_1263 - histidyl-tRNA synthetase, at 1,367,969 to 1,369,258 _1263 Psest_1264: Psest_1264 - Uncharacterized protein conserved in bacteria, at 1,369,286 to 1,369,927 _1264 Psest_1265: Psest_1265 - outer membrane assembly lipoprotein YfgL, at 1,369,928 to 1,371,079 _1265 Position (kb) 1367 1368 1369 1370Strain fitness (log2 ratio) -1 0 1at 1369.262 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB 30C timecourse1 timepoint 3
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1,369,262 + -0.4

Or see this region's nucleotide sequence