Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1069

Experiment: LB 30C timecourse1 timepoint 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 3
1,155,291	+		Psest_1068	0.44	+0.7
1,155,291	+		Psest_1068	0.44	+1.3
1,155,291	+		Psest_1068	0.44	+1.7
1,155,291	+		Psest_1068	0.44	+0.1
1,155,291	+		Psest_1068	0.44	+0.6
1,155,291	+		Psest_1068	0.44	+1.7
1,155,291	+		Psest_1068	0.44	+1.5
1,155,291	+		Psest_1068	0.44	-0.0
1,155,292	-		Psest_1068	0.44	-0.7
1,155,292	-		Psest_1068	0.44	-0.4
1,155,292	-		Psest_1068	0.44	-1.3
1,155,292	-		Psest_1068	0.44	-0.1
1,155,292	-		Psest_1068	0.44	+0.3
1,155,315	+		Psest_1068	0.46	+0.9
1,155,318	+		Psest_1068	0.46	+1.3
1,155,318	+		Psest_1068	0.46	+1.0
1,155,319	-		Psest_1068	0.46	+0.0
1,155,319	-		Psest_1068	0.46	-1.0
1,155,319	-		Psest_1068	0.46	-0.1
1,155,319	-		Psest_1068	0.46	+0.2
1,155,600	-		Psest_1068	0.68	+0.2
1,155,600	-		Psest_1068	0.68	+0.4
1,155,600	-		Psest_1068	0.68	+0.7
1,155,600	-		Psest_1068	0.68	-0.5
1,155,600	-		Psest_1068	0.68	-0.1
1,155,876	+				-0.9
1,155,876	+				+0.9
1,155,876	+				+0.4
1,155,876	+				-1.0
1,155,877	-				-0.6
1,156,003	+				+0.7
1,156,003	+				+1.0
1,156,003	+				+2.0
1,156,003	+				+0.3
1,156,004	-				-0.9
1,156,004	-				-1.0
1,156,181	+				+0.1
1,156,181	+				+0.1
1,156,181	+				-1.0
1,156,181	+				+0.9
1,156,181	+				-0.4
1,156,182	-				-1.9
1,156,182	-				+0.5
1,156,182	-				+0.6
1,156,182	-				-0.0
1,156,182	-				+0.3
1,156,182	-				-1.3
1,156,299	+				+0.9
1,156,299	+				+0.3
1,156,345	+				+0.3
1,156,345	+				+1.9
1,156,345	+				+1.1
1,156,346	-				+2.7
1,156,346	-				+0.3
1,156,346	-				+1.3
1,156,525	+		Psest_1069	0.14	+1.3
1,156,525	+		Psest_1069	0.14	+1.7
1,156,525	+		Psest_1069	0.14	-0.0
1,156,582	+		Psest_1069	0.17	+0.9
1,156,583	-		Psest_1069	0.17	-0.3
1,156,583	-		Psest_1069	0.17	-1.7
1,156,585	+		Psest_1069	0.17	+0.4
1,156,586	-		Psest_1069	0.17	+0.6
1,156,625	+		Psest_1069	0.19	+1.3
1,156,686	+		Psest_1069	0.22	+0.6
1,156,687	-		Psest_1069	0.23	+0.9
1,157,305	+		Psest_1069	0.56	+0.5
1,157,305	+		Psest_1069	0.56	+0.8
1,157,306	-		Psest_1069	0.56	+1.6
1,157,306	-		Psest_1069	0.56	-0.3
1,157,401	+		Psest_1069	0.62	-2.3
1,157,402	-		Psest_1069	0.62	+0.5
1,157,485	+		Psest_1069	0.66	+1.3
1,157,486	-		Psest_1069	0.66	+0.5
1,157,572	+		Psest_1069	0.71	+0.3
1,157,617	-		Psest_1069	0.73	-1.2
1,157,650	+		Psest_1069	0.75	+1.3
1,157,976	-				-0.3
1,158,125	+				+0.9
1,158,125	+				+0.5
1,158,126	-				+1.3
1,158,238	+				+1.3
1,158,246	+				+0.5
1,158,246	+				+1.1
1,158,246	+				-0.1
1,158,247	-				+1.3
1,158,247	-				+0.3
1,158,247	-				-0.7
1,158,247	-				+1.3
1,158,247	-				-0.6
1,158,447	+		Psest_1070	0.51	+2.3
1,158,447	+		Psest_1070	0.51	-0.1
1,158,448	-		Psest_1070	0.51	+2.9
1,158,493	-		Psest_1070	0.62	+1.2
1,158,567	-		Psest_1070	0.81	-0.0
1,158,694	+				+1.9
1,158,695	-				-0.7
1,158,695	-				+0.8
1,158,695	-				-0.0
1,158,695	-				+1.3
1,158,695	-				+1.3
1,158,748	-				-1.0
1,158,792	+				+0.3
1,158,793	-				+2.7
1,158,793	-				+0.0
1,158,978	+		Psest_1071	0.15	+0.3
1,158,978	+		Psest_1071	0.15	+0.3
1,158,979	-		Psest_1071	0.15	-1.0
1,159,040	+		Psest_1071	0.19	+3.6
1,159,041	-		Psest_1071	0.19	-0.7
1,159,041	-		Psest_1071	0.19	+0.7
1,159,041	-		Psest_1071	0.19	+1.1