Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g109

Experiment: acetate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_p187g108 and HP15_p187g109 are separated by 91 nucleotidesHP15_p187g109 and HP15_p187g110 overlap by 4 nucleotides HP15_p187g108: HP15_p187g108 - conserved hypothetical protein, at 102,373 to 103,455 _p187g108 HP15_p187g109: HP15_p187g109 - conserved hypothetical protein, secreted, at 103,547 to 103,792 _p187g109 HP15_p187g110: HP15_p187g110 - conserved hypothetical protein, at 103,789 to 105,543 _p187g110 Position (kb) 103 104Strain fitness (log2 ratio) -2 -1 0 1 2at 102.550 kb on - strand, within HP15_p187g108at 102.550 kb on - strand, within HP15_p187g108at 102.550 kb on - strand, within HP15_p187g108at 102.550 kb on - strand, within HP15_p187g108at 102.551 kb on + strand, within HP15_p187g108at 102.582 kb on + strand, within HP15_p187g108at 102.583 kb on - strand, within HP15_p187g108at 102.587 kb on + strand, within HP15_p187g108at 102.590 kb on - strand, within HP15_p187g108at 102.592 kb on + strand, within HP15_p187g108at 102.597 kb on - strand, within HP15_p187g108at 102.599 kb on + strand, within HP15_p187g108at 102.600 kb on - strand, within HP15_p187g108at 102.602 kb on + strand, within HP15_p187g108at 102.602 kb on - strand, within HP15_p187g108at 102.602 kb on - strand, within HP15_p187g108at 102.641 kb on - strand, within HP15_p187g108at 102.641 kb on - strand, within HP15_p187g108at 102.660 kb on + strand, within HP15_p187g108at 102.704 kb on - strand, within HP15_p187g108at 102.731 kb on + strand, within HP15_p187g108at 102.745 kb on - strand, within HP15_p187g108at 102.822 kb on - strand, within HP15_p187g108at 102.835 kb on - strand, within HP15_p187g108at 102.837 kb on - strand, within HP15_p187g108at 102.837 kb on - strand, within HP15_p187g108at 102.858 kb on - strand, within HP15_p187g108at 102.882 kb on - strand, within HP15_p187g108at 102.889 kb on - strand, within HP15_p187g108at 102.920 kb on + strand, within HP15_p187g108at 102.920 kb on + strand, within HP15_p187g108at 102.920 kb on + strand, within HP15_p187g108at 102.928 kb on - strand, within HP15_p187g108at 102.928 kb on - strand, within HP15_p187g108at 102.938 kb on - strand, within HP15_p187g108at 102.945 kb on + strand, within HP15_p187g108at 102.948 kb on - strand, within HP15_p187g108at 102.960 kb on + strand, within HP15_p187g108at 102.963 kb on - strand, within HP15_p187g108at 102.968 kb on - strand, within HP15_p187g108at 102.968 kb on - strand, within HP15_p187g108at 102.980 kb on + strand, within HP15_p187g108at 102.980 kb on + strand, within HP15_p187g108at 102.985 kb on + strand, within HP15_p187g108at 102.993 kb on - strand, within HP15_p187g108at 102.993 kb on - strand, within HP15_p187g108at 103.015 kb on + strand, within HP15_p187g108at 103.053 kb on - strand, within HP15_p187g108at 103.090 kb on + strand, within HP15_p187g108at 103.169 kb on + strand, within HP15_p187g108at 103.177 kb on + strand, within HP15_p187g108at 103.177 kb on + strand, within HP15_p187g108at 103.177 kb on + strand, within HP15_p187g108at 103.177 kb on - strand, within HP15_p187g108at 103.236 kb on + strand, within HP15_p187g108at 103.237 kb on - strand, within HP15_p187g108at 103.244 kb on + strand, within HP15_p187g108at 103.262 kb on - strand, within HP15_p187g108at 103.279 kb on - strand, within HP15_p187g108at 103.299 kb on + strand, within HP15_p187g108at 103.349 kb on - strandat 103.354 kb on - strandat 103.375 kb on - strandat 103.434 kb on + strandat 103.489 kb on - strandat 103.491 kb on + strandat 103.491 kb on + strandat 103.491 kb on + strandat 103.499 kb on - strandat 103.499 kb on - strandat 103.499 kb on - strandat 103.501 kb on + strandat 103.501 kb on + strandat 103.501 kb on + strandat 103.509 kb on - strandat 103.509 kb on - strandat 103.509 kb on - strandat 103.509 kb on - strandat 103.529 kb on - strandat 103.545 kb on + strandat 103.545 kb on + strandat 103.545 kb on + strandat 103.545 kb on + strandat 103.553 kb on - strandat 103.632 kb on + strand, within HP15_p187g109at 103.632 kb on + strand, within HP15_p187g109at 103.641 kb on - strand, within HP15_p187g109at 103.652 kb on + strand, within HP15_p187g109at 103.690 kb on + strand, within HP15_p187g109at 103.711 kb on - strand, within HP15_p187g109at 103.769 kb on - strandat 103.769 kb on - strandat 103.774 kb on + strandat 103.812 kb on + strandat 103.869 kb on + strandat 103.877 kb on - strandat 103.879 kb on + strandat 103.911 kb on - strandat 103.938 kb on - strandat 104.079 kb on - strand, within HP15_p187g110at 104.112 kb on + strand, within HP15_p187g110at 104.122 kb on + strand, within HP15_p187g110at 104.122 kb on + strand, within HP15_p187g110at 104.122 kb on + strand, within HP15_p187g110at 104.130 kb on - strand, within HP15_p187g110at 104.238 kb on - strand, within HP15_p187g110at 104.340 kb on - strand, within HP15_p187g110at 104.378 kb on + strand, within HP15_p187g110at 104.386 kb on + strand, within HP15_p187g110at 104.394 kb on - strand, within HP15_p187g110at 104.394 kb on - strand, within HP15_p187g110at 104.394 kb on - strand, within HP15_p187g110at 104.421 kb on + strand, within HP15_p187g110at 104.429 kb on - strand, within HP15_p187g110at 104.429 kb on - strand, within HP15_p187g110at 104.451 kb on + strand, within HP15_p187g110at 104.512 kb on + strand, within HP15_p187g110at 104.529 kb on + strand, within HP15_p187g110at 104.569 kb on + strand, within HP15_p187g110at 104.609 kb on - strand, within HP15_p187g110at 104.614 kb on - strand, within HP15_p187g110at 104.642 kb on - strand, within HP15_p187g110at 104.642 kb on - strand, within HP15_p187g110at 104.651 kb on + strand, within HP15_p187g110at 104.651 kb on + strand, within HP15_p187g110at 104.735 kb on + strand, within HP15_p187g110at 104.773 kb on - strand, within HP15_p187g110at 104.773 kb on - strand, within HP15_p187g110

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Per-strain Table

Position Strand Gene LocusTag Fraction acetate (C)
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102,550 - HP15_p187g108 0.16 -0.7
102,550 - HP15_p187g108 0.16 -0.4
102,550 - HP15_p187g108 0.16 +1.0
102,550 - HP15_p187g108 0.16 +1.0
102,551 + HP15_p187g108 0.16 +0.0
102,582 + HP15_p187g108 0.19 +1.0
102,583 - HP15_p187g108 0.19 +0.1
102,587 + HP15_p187g108 0.20 -0.9
102,590 - HP15_p187g108 0.20 -1.1
102,592 + HP15_p187g108 0.20 +0.6
102,597 - HP15_p187g108 0.21 +0.6
102,599 + HP15_p187g108 0.21 -0.6
102,600 - HP15_p187g108 0.21 +0.4
102,602 + HP15_p187g108 0.21 -0.2
102,602 - HP15_p187g108 0.21 +1.2
102,602 - HP15_p187g108 0.21 +0.1
102,641 - HP15_p187g108 0.25 +1.1
102,641 - HP15_p187g108 0.25 +0.2
102,660 + HP15_p187g108 0.27 +0.7
102,704 - HP15_p187g108 0.31 +0.7
102,731 + HP15_p187g108 0.33 -1.7
102,745 - HP15_p187g108 0.34 +0.4
102,822 - HP15_p187g108 0.41 -0.5
102,835 - HP15_p187g108 0.43 -1.7
102,837 - HP15_p187g108 0.43 +0.3
102,837 - HP15_p187g108 0.43 -2.0
102,858 - HP15_p187g108 0.45 -0.3
102,882 - HP15_p187g108 0.47 -0.8
102,889 - HP15_p187g108 0.48 -0.4
102,920 + HP15_p187g108 0.51 -0.1
102,920 + HP15_p187g108 0.51 +0.4
102,920 + HP15_p187g108 0.51 -0.4
102,928 - HP15_p187g108 0.51 +0.1
102,928 - HP15_p187g108 0.51 +1.9
102,938 - HP15_p187g108 0.52 -0.5
102,945 + HP15_p187g108 0.53 +1.1
102,948 - HP15_p187g108 0.53 +1.3
102,960 + HP15_p187g108 0.54 +0.2
102,963 - HP15_p187g108 0.54 -0.7
102,968 - HP15_p187g108 0.55 +1.9
102,968 - HP15_p187g108 0.55 -1.4
102,980 + HP15_p187g108 0.56 +0.4
102,980 + HP15_p187g108 0.56 +1.0
102,985 + HP15_p187g108 0.57 +0.9
102,993 - HP15_p187g108 0.57 +0.7
102,993 - HP15_p187g108 0.57 +0.9
103,015 + HP15_p187g108 0.59 +0.6
103,053 - HP15_p187g108 0.63 -0.5
103,090 + HP15_p187g108 0.66 +0.8
103,169 + HP15_p187g108 0.73 +0.9
103,177 + HP15_p187g108 0.74 +1.2
103,177 + HP15_p187g108 0.74 -1.2
103,177 + HP15_p187g108 0.74 -0.1
103,177 - HP15_p187g108 0.74 +0.6
103,236 + HP15_p187g108 0.80 -0.6
103,237 - HP15_p187g108 0.80 -0.6
103,244 + HP15_p187g108 0.80 -0.1
103,262 - HP15_p187g108 0.82 +1.1
103,279 - HP15_p187g108 0.84 -0.0
103,299 + HP15_p187g108 0.86 -0.2
103,349 - +0.5
103,354 - -0.5
103,375 - -0.9
103,434 + +0.8
103,489 - +0.3
103,491 + +0.5
103,491 + +0.8
103,491 + -0.4
103,499 - -0.8
103,499 - -0.5
103,499 - -0.1
103,501 + -0.9
103,501 + +1.1
103,501 + -0.5
103,509 - +1.3
103,509 - -0.4
103,509 - +0.1
103,509 - -0.2
103,529 - -0.0
103,545 + -0.5
103,545 + +0.8
103,545 + +1.1
103,545 + -0.3
103,553 - -0.1
103,632 + HP15_p187g109 0.35 +1.3
103,632 + HP15_p187g109 0.35 -0.2
103,641 - HP15_p187g109 0.38 +1.3
103,652 + HP15_p187g109 0.43 +0.4
103,690 + HP15_p187g109 0.58 +0.0
103,711 - HP15_p187g109 0.67 +0.1
103,769 - +0.8
103,769 - -0.5
103,774 + +0.7
103,812 + +0.8
103,869 + -0.6
103,877 - +0.5
103,879 + -0.1
103,911 - -0.2
103,938 - -0.6
104,079 - HP15_p187g110 0.17 -0.4
104,112 + HP15_p187g110 0.18 +1.2
104,122 + HP15_p187g110 0.19 +0.8
104,122 + HP15_p187g110 0.19 -0.1
104,122 + HP15_p187g110 0.19 -0.5
104,130 - HP15_p187g110 0.19 +1.4
104,238 - HP15_p187g110 0.26 +0.9
104,340 - HP15_p187g110 0.31 -0.2
104,378 + HP15_p187g110 0.34 +0.0
104,386 + HP15_p187g110 0.34 +0.1
104,394 - HP15_p187g110 0.34 +0.6
104,394 - HP15_p187g110 0.34 +1.1
104,394 - HP15_p187g110 0.34 -0.4
104,421 + HP15_p187g110 0.36 +0.6
104,429 - HP15_p187g110 0.36 -0.5
104,429 - HP15_p187g110 0.36 +0.9
104,451 + HP15_p187g110 0.38 +0.9
104,512 + HP15_p187g110 0.41 -0.3
104,529 + HP15_p187g110 0.42 -0.2
104,569 + HP15_p187g110 0.44 +0.0
104,609 - HP15_p187g110 0.47 +0.9
104,614 - HP15_p187g110 0.47 +0.7
104,642 - HP15_p187g110 0.49 -0.8
104,642 - HP15_p187g110 0.49 -0.2
104,651 + HP15_p187g110 0.49 -0.4
104,651 + HP15_p187g110 0.49 +0.2
104,735 + HP15_p187g110 0.54 +1.0
104,773 - HP15_p187g110 0.56 +1.2
104,773 - HP15_p187g110 0.56 +0.2

Or see this region's nucleotide sequence