Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3964

Experiment: LB 30C timecourse1 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 2
4,130,858	-		Psest_3963	0.64	+0.8
4,131,082	-		Psest_3963	0.73	+3.0
4,131,120	+		Psest_3963	0.75	+1.7
4,131,170	-		Psest_3963	0.77	+0.3
4,131,276	-		Psest_3963	0.81	+1.0
4,131,276	-		Psest_3963	0.81	-0.4
4,131,321	+		Psest_3963	0.82	-1.8
4,131,321	+		Psest_3963	0.82	+0.9
4,131,321	+		Psest_3963	0.82	+0.4
4,131,321	+		Psest_3963	0.82	+0.9
4,131,322	-		Psest_3963	0.82	+1.1
4,131,333	+		Psest_3963	0.83	+0.9
4,131,333	+		Psest_3963	0.83	+1.3
4,131,333	+		Psest_3963	0.83	-0.2
4,131,333	+		Psest_3963	0.83	+2.0
4,131,334	-		Psest_3963	0.83	+0.5
4,131,334	-		Psest_3963	0.83	+1.0
4,131,511	+		Psest_3963	0.90	+0.3
4,131,543	-				+1.0
4,131,646	-				+0.6
4,131,796	-				-0.8
4,131,930	+				+0.1
4,132,005	+		Psest_3964	0.17	-0.2
4,132,005	+		Psest_3964	0.17	-0.1
4,132,005	+		Psest_3964	0.17	+1.2
4,132,005	+		Psest_3964	0.17	+1.2
4,132,005	+		Psest_3964	0.17	-1.3
4,132,005	+		Psest_3964	0.17	-0.6
4,132,005	+		Psest_3964	0.17	-1.0
4,132,006	-		Psest_3964	0.17	-0.6
4,132,006	-		Psest_3964	0.17	-0.1
4,132,006	-		Psest_3964	0.17	+1.1
4,132,006	-		Psest_3964	0.17	+0.7
4,132,006	-		Psest_3964	0.17	+0.9
4,132,006	-		Psest_3964	0.17	+0.2
4,132,006	-		Psest_3964	0.17	+2.6
4,132,006	-		Psest_3964	0.17	+0.4
4,132,006	-		Psest_3964	0.17	+0.4
4,132,006	-		Psest_3964	0.17	-0.2
4,132,007	+		Psest_3964	0.18	+0.2
4,132,113	+		Psest_3964	0.30	+0.8
4,132,113	+		Psest_3964	0.30	+0.7
4,132,113	+		Psest_3964	0.30	+1.0
4,132,113	+		Psest_3964	0.30	+0.1
4,132,113	+		Psest_3964	0.30	+0.7
4,132,113	+		Psest_3964	0.30	+1.1
4,132,113	+		Psest_3964	0.30	-1.7
4,132,113	+		Psest_3964	0.30	+0.1
4,132,113	+		Psest_3964	0.30	+1.0
4,132,113	+		Psest_3964	0.30	-1.2
4,132,113	+		Psest_3964	0.30	+1.9
4,132,113	+		Psest_3964	0.30	-0.8
4,132,113	+		Psest_3964	0.30	+0.2
4,132,113	+		Psest_3964	0.30	+0.3
4,132,113	+		Psest_3964	0.30	-0.3
4,132,113	+		Psest_3964	0.30	+0.2
4,132,113	+		Psest_3964	0.30	+0.2
4,132,113	+		Psest_3964	0.30	-1.0
4,132,113	+		Psest_3964	0.30	+0.8
4,132,113	+		Psest_3964	0.30	+0.8
4,132,113	+		Psest_3964	0.30	-0.2
4,132,113	+		Psest_3964	0.30	+0.4
4,132,113	+		Psest_3964	0.30	-0.7
4,132,113	+		Psest_3964	0.30	+1.7
4,132,114	-		Psest_3964	0.30	-1.9
4,132,114	-		Psest_3964	0.30	-0.1
4,132,114	-		Psest_3964	0.30	+0.8
4,132,114	-		Psest_3964	0.30	+0.6
4,132,114	-		Psest_3964	0.30	+0.4
4,132,114	-		Psest_3964	0.30	+0.3
4,132,114	-		Psest_3964	0.30	+0.9
4,132,114	-		Psest_3964	0.30	+0.4
4,132,114	-		Psest_3964	0.30	+0.5
4,132,114	-		Psest_3964	0.30	+0.6
4,132,114	-		Psest_3964	0.30	+0.4
4,132,114	-		Psest_3964	0.30	+0.5
4,132,114	-		Psest_3964	0.30	-1.4
4,132,114	-		Psest_3964	0.30	-0.3
4,132,114	-		Psest_3964	0.30	+0.5
4,132,114	-		Psest_3964	0.30	+0.0
4,132,114	-		Psest_3964	0.30	-0.0
4,132,114	-		Psest_3964	0.30	+1.0
4,132,114	-		Psest_3964	0.30	+0.4
4,132,114	-		Psest_3964	0.30	+0.9
4,132,114	-		Psest_3964	0.30	-0.4
4,132,325	-		Psest_3964	0.55	+0.5
4,132,325	-		Psest_3964	0.55	+1.3
4,132,334	+		Psest_3964	0.56	-1.0
4,132,443	-		Psest_3964	0.69	+0.7
4,132,550	-		Psest_3964	0.82	+0.8
4,132,550	-		Psest_3964	0.82	+1.0
4,132,550	-		Psest_3964	0.82	-2.1
4,132,550	-		Psest_3964	0.82	-0.1
4,132,671	+				-1.5
4,132,671	+				+0.0
4,132,671	+				-0.5
4,132,671	+				-1.0
4,132,730	+				+1.0
4,132,730	+				-0.8
4,132,730	+				+0.2
4,132,730	+				-0.6
4,132,730	+				+1.0
4,132,730	+				+0.8
4,132,730	+				+0.2
4,132,730	+				+0.1
4,132,730	+				+0.4
4,132,730	+				+0.0
4,132,730	+				+1.3
4,132,730	+				+0.7
4,132,730	+				+0.2
4,132,730	+				-0.3
4,132,730	+				+0.4
4,132,744	-				+0.3
4,132,915	+				-1.8
4,132,915	+				+0.3
4,132,915	+				+1.1
4,132,915	+				-0.6
4,132,916	-				+0.2
4,132,916	-				+0.8
4,132,916	-				-1.8
4,132,916	-				-0.1
4,132,916	-				+0.2
4,132,916	-				-0.6
4,133,025	-		Psest_3965	0.25	-0.2
4,133,025	-		Psest_3965	0.25	+0.3
4,133,184	-		Psest_3965	0.60	-0.6
4,133,184	-		Psest_3965	0.60	+0.2
4,133,190	+		Psest_3965	0.61	-1.7
4,133,308	+		Psest_3965	0.87	-1.3
4,133,309	-		Psest_3965	0.87	-1.8
4,133,309	-		Psest_3965	0.87	+0.4
4,133,309	-		Psest_3965	0.87	+0.3
4,133,311	+		Psest_3965	0.88	-0.2
4,133,311	+		Psest_3965	0.88	-0.6
4,133,312	-		Psest_3965	0.88	-0.1
4,133,312	-		Psest_3965	0.88	+0.4
4,133,341	+				-1.0
4,133,341	+				+0.7
4,133,341	+				-2.0
4,133,342	-				-1.1
4,133,342	-				+0.4
4,133,625	+		Psest_3966	0.32	+0.1
4,133,660	+		Psest_3966	0.40	-0.6
4,133,703	+		Psest_3966	0.50	-0.4
4,133,703	+		Psest_3966	0.50	+1.3
4,133,703	+		Psest_3966	0.50	-0.6
4,133,704	-		Psest_3966	0.50	-0.3
4,133,704	-		Psest_3966	0.50	+1.0