Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3406

Experiment: LB 30C timecourse1 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 2
3,574,253	+		Psest_3405	0.57	-0.1
3,574,279	+		Psest_3405	0.59	+0.3
3,574,279	+		Psest_3405	0.59	-0.2
3,574,279	+		Psest_3405	0.59	+0.3
3,574,279	+		Psest_3405	0.59	-1.5
3,574,279	+		Psest_3405	0.59	-0.1
3,574,279	+		Psest_3405	0.59	+0.1
3,574,279	+		Psest_3405	0.59	+0.4
3,574,279	+		Psest_3405	0.59	-0.7
3,574,279	+		Psest_3405	0.59	-0.7
3,574,279	+		Psest_3405	0.59	+0.2
3,574,279	+		Psest_3405	0.59	-0.1
3,574,279	+		Psest_3405	0.59	-0.4
3,574,280	-		Psest_3405	0.59	+0.2
3,574,280	-		Psest_3405	0.59	-1.7
3,574,280	-		Psest_3405	0.59	-1.1
3,574,280	-		Psest_3405	0.59	-0.2
3,574,280	-		Psest_3405	0.59	+2.5
3,574,280	-		Psest_3405	0.59	-0.6
3,574,280	-		Psest_3405	0.59	+0.3
3,574,280	-		Psest_3405	0.59	-1.2
3,574,280	-		Psest_3405	0.59	+0.9
3,574,280	-		Psest_3405	0.59	+0.9
3,574,280	-		Psest_3405	0.59	-1.0
3,574,280	-		Psest_3405	0.59	-0.6
3,574,280	-		Psest_3405	0.59	-0.0
3,574,280	-		Psest_3405	0.59	-0.3
3,574,280	-		Psest_3405	0.59	-1.7
3,574,280	-		Psest_3405	0.59	-0.1
3,574,280	-		Psest_3405	0.59	-0.0
3,574,280	-		Psest_3405	0.59	-0.1
3,574,281	+		Psest_3405	0.59	-0.2
3,574,282	-		Psest_3405	0.59	-0.4
3,574,282	-		Psest_3405	0.59	+0.4
3,574,300	+		Psest_3405	0.60	-0.4
3,574,300	+		Psest_3405	0.60	+0.7
3,574,300	+		Psest_3405	0.60	-0.9
3,574,300	+		Psest_3405	0.60	-0.1
3,574,300	+		Psest_3405	0.60	+0.6
3,574,300	+		Psest_3405	0.60	-0.5
3,574,300	+		Psest_3405	0.60	-2.9
3,574,300	+		Psest_3405	0.60	-0.0
3,574,300	+		Psest_3405	0.60	-1.3
3,574,300	+		Psest_3405	0.60	-1.9
3,574,301	-		Psest_3405	0.60	+0.6
3,574,301	-		Psest_3405	0.60	+0.8
3,574,301	-		Psest_3405	0.60	-0.7
3,574,301	-		Psest_3405	0.60	+0.3
3,574,301	-		Psest_3405	0.60	+0.6
3,574,301	-		Psest_3405	0.60	-1.3
3,574,301	-		Psest_3405	0.60	-0.4
3,574,301	-		Psest_3405	0.60	+1.1
3,574,301	-		Psest_3405	0.60	-0.5
3,574,301	-		Psest_3405	0.60	-0.0
3,574,301	-		Psest_3405	0.60	-1.9
3,574,376	-		Psest_3405	0.63	-0.4
3,574,390	-		Psest_3405	0.64	-0.1
3,574,390	-		Psest_3405	0.64	-0.8
3,574,414	+		Psest_3405	0.65	-0.0
3,574,414	+		Psest_3405	0.65	+0.8
3,574,415	-		Psest_3405	0.65	-2.0
3,574,454	-		Psest_3405	0.67	-1.2
3,574,454	-		Psest_3405	0.67	-0.7
3,574,454	-		Psest_3405	0.67	-0.8
3,574,698	-		Psest_3405	0.80	+0.7
3,574,698	-		Psest_3405	0.80	-0.1
3,574,698	-		Psest_3405	0.80	-0.0
3,574,701	-		Psest_3405	0.80	+0.2
3,574,748	+		Psest_3405	0.82	+0.7
3,574,748	+		Psest_3405	0.82	-2.0
3,574,749	-		Psest_3405	0.82	-0.5
3,574,749	-		Psest_3405	0.82	-0.6
3,574,749	-		Psest_3405	0.82	-1.9
3,574,749	-		Psest_3405	0.82	-0.6
3,574,873	+		Psest_3405	0.89	-1.8
3,574,873	+		Psest_3405	0.89	-1.5
3,574,873	+		Psest_3405	0.89	-1.0
3,574,873	+		Psest_3405	0.89	+0.7
3,574,873	+		Psest_3405	0.89	+0.6
3,574,874	-		Psest_3405	0.89	-1.2
3,574,874	-		Psest_3405	0.89	-0.2
3,574,874	-		Psest_3405	0.89	-0.4
3,574,879	+		Psest_3405	0.89	-0.2
3,574,879	+		Psest_3405	0.89	+0.5
3,574,880	-		Psest_3405	0.89	-0.8
3,574,880	-		Psest_3405	0.89	-0.4
3,574,880	-		Psest_3405	0.89	+0.4
3,574,880	-		Psest_3405	0.89	-0.5
3,574,999	+				-0.7
3,574,999	+				-2.3
3,574,999	+				-0.4
3,574,999	+				-0.4
3,574,999	+				-1.0
3,574,999	+				-0.7
3,574,999	+				-1.4
3,574,999	+				-1.5
3,575,000	-				+0.1
3,575,000	-				-0.4
3,575,000	-				-1.4
3,575,000	-				-0.4
3,575,000	-				-0.3
3,575,000	-				+0.7
3,575,000	-				+0.5
3,575,000	-				-0.2
3,575,000	-				-1.5
3,575,000	-				+0.1
3,575,000	-				+0.4
3,575,000	-				+0.2
3,575,000	-				+0.9
3,575,000	-				+0.6
3,575,000	-				-0.1
3,575,000	-				-2.0
3,575,127	+				-0.2
3,575,127	+				-0.4
3,575,127	+				-0.0
3,575,128	-				-0.2
3,575,158	+				-0.4
3,575,158	+				-1.0
3,575,158	+				+0.3
3,575,158	+				-0.9
3,575,158	+				+0.2
3,575,159	-				+0.7
3,575,159	-				-0.1
3,575,159	-				-1.2
3,575,159	-				+0.3
3,575,159	-				+0.8
3,575,159	-				-0.1
3,575,159	-				-0.2
3,575,159	-				-0.3
3,575,159	-				-0.2
3,575,162	+				-0.4
3,575,171	+				-0.1
3,575,199	-				-0.1
3,575,199	-				-0.1
3,575,237	-				-0.1
3,575,237	-				-0.7
3,575,248	+				-0.3
3,575,249	-				-0.6
3,575,275	-				+0.1
3,575,421	+		Psest_3406	0.15	-0.1
3,575,421	+		Psest_3406	0.15	+0.5
3,575,421	+		Psest_3406	0.15	-0.8
3,575,446	-		Psest_3406	0.17	-0.1
3,575,460	+		Psest_3406	0.18	+0.9
3,575,460	+		Psest_3406	0.18	-0.1
3,575,461	-		Psest_3406	0.18	+0.9
3,575,461	-		Psest_3406	0.18	-0.2
3,575,465	-		Psest_3406	0.18	-0.6
3,575,525	+		Psest_3406	0.23	-0.6
3,575,525	+		Psest_3406	0.23	+0.4
3,575,525	+		Psest_3406	0.23	+3.5
3,575,525	+		Psest_3406	0.23	-0.4
3,575,564	+		Psest_3406	0.26	-0.7
3,575,564	+		Psest_3406	0.26	-0.6
3,575,568	-		Psest_3406	0.26	-1.8
3,575,568	-		Psest_3406	0.26	-0.9
3,575,594	+		Psest_3406	0.28	-0.5
3,575,595	-		Psest_3406	0.28	+0.0
3,575,595	-		Psest_3406	0.28	+0.0
3,575,644	+		Psest_3406	0.32	+0.5
3,575,645	-		Psest_3406	0.32	-0.1
3,575,645	-		Psest_3406	0.32	+0.0
3,575,651	+		Psest_3406	0.32	-1.3
3,575,651	+		Psest_3406	0.32	+0.0
3,575,682	+		Psest_3406	0.35	-0.9
3,575,985	+		Psest_3406	0.57	-0.2
3,575,986	-		Psest_3406	0.57	+0.1
3,576,031	+		Psest_3406	0.61	-0.5
3,576,031	+		Psest_3406	0.61	+0.4
3,576,031	+		Psest_3406	0.61	-0.0
3,576,032	-		Psest_3406	0.61	-0.2
3,576,035	+		Psest_3406	0.61	-2.0
3,576,035	+		Psest_3406	0.61	-0.3
3,576,036	-		Psest_3406	0.61	+0.2
3,576,036	-		Psest_3406	0.61	-0.7
3,576,039	+		Psest_3406	0.61	+0.2
3,576,040	-		Psest_3406	0.62	-0.9
3,576,040	-		Psest_3406	0.62	+0.2
3,576,040	-		Psest_3406	0.62	+0.5
3,576,102	+		Psest_3406	0.66	-0.0
3,576,102	+		Psest_3406	0.66	-0.1
3,576,102	+		Psest_3406	0.66	-0.8
3,576,103	-		Psest_3406	0.66	-1.6
3,576,103	-		Psest_3406	0.66	-0.7
3,576,103	-		Psest_3406	0.66	-0.8
3,576,103	-		Psest_3406	0.66	-2.1
3,576,103	-		Psest_3406	0.66	-1.0
3,576,167	+		Psest_3406	0.71	-1.8
3,576,168	-		Psest_3406	0.71	-0.1
3,576,202	+		Psest_3406	0.74	-0.7
3,576,202	+		Psest_3406	0.74	-0.3
3,576,202	+		Psest_3406	0.74	-0.5
3,576,203	-		Psest_3406	0.74	-2.3
3,576,203	-		Psest_3406	0.74	+0.8
3,576,203	-		Psest_3406	0.74	-0.5
3,576,203	-		Psest_3406	0.74	+0.9
3,576,205	-		Psest_3406	0.74	-0.7
3,576,242	+		Psest_3406	0.77	+0.1
3,576,242	+		Psest_3406	0.77	+0.2
3,576,243	-		Psest_3406	0.77	-0.5
3,576,272	-		Psest_3406	0.79	-0.5
3,576,356	-		Psest_3406	0.85	+0.1
3,576,356	-		Psest_3406	0.85	+0.1
3,576,368	+		Psest_3406	0.86	-0.2
3,576,376	+		Psest_3406	0.87	+1.0
3,576,381	+		Psest_3406	0.87	-0.3
3,576,402	+		Psest_3406	0.89	-0.7
3,576,402	+		Psest_3406	0.89	+0.3
3,576,402	+		Psest_3406	0.89	-0.3
3,576,403	-		Psest_3406	0.89	-0.8
3,576,531	+				-0.4
3,576,531	+				-0.9
3,576,531	+				-1.7
3,576,532	-				+0.1
3,576,548	+				-0.6
3,576,658	+				+0.3
3,576,658	+				-0.5
3,576,658	+				+0.4
3,576,658	+				-0.1
3,576,658	+				-0.8
3,576,658	+				+0.5
3,576,658	+				-1.2
3,576,658	+				+0.9
3,576,658	+				-0.1
3,576,658	+				-1.1
3,576,659	-				-0.1
3,576,659	-				-0.1
3,576,659	-				+0.3
3,576,671	+				-0.5
3,576,672	-				-2.1
3,576,672	-				+0.9
3,576,679	+				-0.8
3,576,931	+		Psest_3407	0.12	-0.2
3,576,931	+		Psest_3407	0.12	-1.8
3,576,931	+		Psest_3407	0.12	-0.4
3,576,932	-		Psest_3407	0.12	+0.5
3,576,973	+		Psest_3407	0.13	-0.7
3,576,973	+		Psest_3407	0.13	+0.5
3,576,973	+		Psest_3407	0.13	-0.1
3,576,973	+		Psest_3407	0.13	-0.6
3,576,973	+		Psest_3407	0.13	-0.2
3,576,973	+		Psest_3407	0.13	+0.8
3,576,973	+		Psest_3407	0.13	+0.0
3,576,974	-		Psest_3407	0.13	-0.1
3,576,974	-		Psest_3407	0.13	-0.5
3,576,974	-		Psest_3407	0.13	+0.3
3,576,974	-		Psest_3407	0.13	+0.3
3,576,974	-		Psest_3407	0.13	-0.7
3,576,974	-		Psest_3407	0.13	-1.6
3,576,974	-		Psest_3407	0.13	+0.5
3,576,974	-		Psest_3407	0.13	-0.8
3,576,974	-		Psest_3407	0.13	-0.7
3,576,974	-		Psest_3407	0.13	+0.2
3,576,974	-		Psest_3407	0.13	+0.1
3,576,974	-		Psest_3407	0.13	+0.4
3,576,974	-		Psest_3407	0.13	+0.3
3,576,974	-		Psest_3407	0.13	-0.3
3,576,974	-		Psest_3407	0.13	-0.7
3,577,140	+		Psest_3407	0.18	+0.9
3,577,291	+		Psest_3407	0.23	+0.3
3,577,291	+		Psest_3407	0.23	-1.3
3,577,291	+		Psest_3407	0.23	-0.3