Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30180

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
3,154,710	-		PGA1_c30170	0.11	-0.2
3,154,724	+		PGA1_c30170	0.12	-1.3
3,154,730	+		PGA1_c30170	0.13	-1.5
3,154,733	-		PGA1_c30170	0.13	-1.9
3,154,738	+		PGA1_c30170	0.14	-0.1
3,154,746	-		PGA1_c30170	0.14	-1.8
3,154,746	-		PGA1_c30170	0.14	-1.8
3,154,747	+		PGA1_c30170	0.14	-0.6
3,154,747	+		PGA1_c30170	0.14	-1.6
3,154,747	+		PGA1_c30170	0.14	-2.0
3,154,747	+		PGA1_c30170	0.14	-3.0
3,154,747	+		PGA1_c30170	0.14	-1.6
3,154,747	+		PGA1_c30170	0.14	-3.4
3,154,747	+		PGA1_c30170	0.14	-1.2
3,154,747	+		PGA1_c30170	0.14	-1.1
3,154,747	+		PGA1_c30170	0.14	-2.0
3,154,747	+		PGA1_c30170	0.14	-2.8
3,154,747	+		PGA1_c30170	0.14	+0.4
3,154,747	+		PGA1_c30170	0.14	-2.5
3,154,747	+		PGA1_c30170	0.14	-2.0
3,154,747	+		PGA1_c30170	0.14	-2.0
3,154,747	+		PGA1_c30170	0.14	-0.0
3,154,747	+		PGA1_c30170	0.14	-2.4
3,154,747	+		PGA1_c30170	0.14	-0.9
3,154,747	+		PGA1_c30170	0.14	-1.5
3,154,747	+		PGA1_c30170	0.14	-1.2
3,154,747	+		PGA1_c30170	0.14	-3.0
3,154,747	+		PGA1_c30170	0.14	-0.4
3,154,747	+		PGA1_c30170	0.14	-1.3
3,154,747	+		PGA1_c30170	0.14	-0.7
3,154,747	+		PGA1_c30170	0.14	-1.1
3,154,747	+		PGA1_c30170	0.14	-0.8
3,154,747	+		PGA1_c30170	0.14	-3.4
3,154,755	-		PGA1_c30170	0.15	-1.5
3,154,755	-		PGA1_c30170	0.15	-0.8
3,154,755	-		PGA1_c30170	0.15	-1.5
3,154,755	-		PGA1_c30170	0.15	-0.6
3,154,755	-		PGA1_c30170	0.15	-0.0
3,154,755	-		PGA1_c30170	0.15	-2.9
3,154,755	-		PGA1_c30170	0.15	-1.2
3,154,755	-		PGA1_c30170	0.15	-1.2
3,154,755	-		PGA1_c30170	0.15	-1.0
3,154,755	-		PGA1_c30170	0.15	-0.5
3,154,755	-		PGA1_c30170	0.15	-0.4
3,154,755	-		PGA1_c30170	0.15	-0.0
3,154,755	-		PGA1_c30170	0.15	-0.5
3,154,755	-		PGA1_c30170	0.15	-2.5
3,154,755	-		PGA1_c30170	0.15	-1.4
3,154,755	-		PGA1_c30170	0.15	-0.4
3,154,755	-		PGA1_c30170	0.15	-1.1
3,154,755	-		PGA1_c30170	0.15	-1.1
3,154,755	-		PGA1_c30170	0.15	-1.2
3,154,755	-		PGA1_c30170	0.15	-1.0
3,154,755	-		PGA1_c30170	0.15	-1.4
3,154,755	-		PGA1_c30170	0.15	-1.7
3,154,755	-		PGA1_c30170	0.15	-1.3
3,154,755	-		PGA1_c30170	0.15	-2.2
3,154,755	-		PGA1_c30170	0.15	-0.6
3,154,755	-		PGA1_c30170	0.15	-0.5
3,154,768	-		PGA1_c30170	0.16	-2.5
3,154,795	+		PGA1_c30170	0.19	-0.2
3,154,807	+		PGA1_c30170	0.20	-1.2
3,154,819	+		PGA1_c30170	0.21	+0.4
3,154,834	+		PGA1_c30170	0.22	-0.0
3,154,848	-		PGA1_c30170	0.24	-0.3
3,154,858	+		PGA1_c30170	0.25	-2.3
3,154,865	-		PGA1_c30170	0.25	-2.1
3,154,875	+		PGA1_c30170	0.26	-1.7
3,154,875	-		PGA1_c30170	0.26	-1.3
3,154,875	-		PGA1_c30170	0.26	-2.2
3,154,883	-		PGA1_c30170	0.27	-1.7
3,154,888	+		PGA1_c30170	0.27	+0.0
3,154,900	-		PGA1_c30170	0.28	-0.5
3,154,900	-		PGA1_c30170	0.28	-1.2
3,154,905	-		PGA1_c30170	0.29	-1.5
3,154,914	+		PGA1_c30170	0.30	-1.2
3,154,915	-		PGA1_c30170	0.30	-1.8
3,154,959	-		PGA1_c30170	0.34	-1.3
3,154,965	+		PGA1_c30170	0.34	-0.0
3,154,973	-		PGA1_c30170	0.35	-2.8
3,154,993	-		PGA1_c30170	0.37	+0.2
3,154,998	-		PGA1_c30170	0.37	-0.8
3,155,007	-		PGA1_c30170	0.38	-2.0
3,155,021	-		PGA1_c30170	0.40	-0.9
3,155,043	+		PGA1_c30170	0.42	-2.1
3,155,051	-		PGA1_c30170	0.42	-0.6
3,155,051	-		PGA1_c30170	0.42	-1.2
3,155,051	-		PGA1_c30170	0.42	-2.4
3,155,052	-		PGA1_c30170	0.42	-1.6
3,155,061	+		PGA1_c30170	0.43	-1.9
3,155,068	+		PGA1_c30170	0.44	-2.7
3,155,068	+		PGA1_c30170	0.44	-1.0
3,155,068	+		PGA1_c30170	0.44	-1.0
3,155,069	-		PGA1_c30170	0.44	-2.9
3,155,069	-		PGA1_c30170	0.44	-1.7
3,155,076	-		PGA1_c30170	0.45	-0.6
3,155,159	-		PGA1_c30170	0.52	-4.2
3,155,164	-		PGA1_c30170	0.53	-0.9
3,155,178	-		PGA1_c30170	0.54	-1.9
3,155,217	-		PGA1_c30170	0.58	-1.1
3,155,232	+		PGA1_c30170	0.59	-0.8
3,155,234	-		PGA1_c30170	0.59	-1.3
3,155,271	+		PGA1_c30170	0.63	-1.6
3,155,273	-		PGA1_c30170	0.63	-1.7
3,155,357	-		PGA1_c30170	0.71	-0.4
3,155,358	-		PGA1_c30170	0.71	-0.6
3,155,378	+		PGA1_c30170	0.72	-1.7
3,155,411	+		PGA1_c30170	0.76	-0.7
3,155,411	+		PGA1_c30170	0.76	-1.1
3,155,419	-		PGA1_c30170	0.76	-2.9
3,155,422	+		PGA1_c30170	0.77	-2.3
3,155,454	-		PGA1_c30170	0.79	-1.0
3,155,473	-		PGA1_c30170	0.81	-2.0
3,155,491	+		PGA1_c30170	0.83	-2.1
3,155,518	+		PGA1_c30170	0.85	-0.6
3,155,525	+		PGA1_c30170	0.86	-0.3
3,155,545	+		PGA1_c30170	0.88	+0.3
3,155,546	+		PGA1_c30170	0.88	+0.4
3,155,546	+		PGA1_c30170	0.88	-1.0
3,155,554	-		PGA1_c30170	0.89	-0.9
3,155,571	+				-2.9
3,155,584	-				-1.5
3,155,599	-				-3.1
3,155,599	-				-1.1
3,155,639	-				-1.3
3,155,662	+				-2.1
3,155,670	-				-1.0
3,155,670	-				+0.0
3,155,670	-				-1.0
3,155,670	-				-1.7
3,155,729	+				-1.7
3,155,737	-				-0.7
3,155,750	-				-1.1
3,155,768	-				-1.4
3,155,769	+				-0.3
3,155,769	+				-2.1
3,155,776	+				-0.9
3,155,776	+				-0.7
3,155,777	+				-3.2
3,155,785	-				-0.4
3,155,785	-				-0.2
3,155,820	+				-1.9
3,155,841	-				-1.7
3,155,891	-		PGA1_c30180	0.11	-1.3
3,155,893	+		PGA1_c30180	0.11	-1.1
3,155,896	-		PGA1_c30180	0.11	-2.8
3,155,968	+		PGA1_c30180	0.15	-1.6
3,156,020	+		PGA1_c30180	0.17	-0.4
3,156,035	-		PGA1_c30180	0.18	-1.6
3,156,054	-		PGA1_c30180	0.19	-1.4
3,156,088	+		PGA1_c30180	0.21	-0.8
3,156,118	+		PGA1_c30180	0.22	-0.9
3,156,128	+		PGA1_c30180	0.23	-1.8
3,156,128	+		PGA1_c30180	0.23	-1.9
3,156,136	-		PGA1_c30180	0.23	+0.1
3,156,157	+		PGA1_c30180	0.24	+0.4
3,156,171	+		PGA1_c30180	0.25	-2.1
3,156,218	+		PGA1_c30180	0.28	-1.0
3,156,226	-		PGA1_c30180	0.28	-0.9
3,156,226	-		PGA1_c30180	0.28	-1.1
3,156,254	+		PGA1_c30180	0.30	-0.8
3,156,365	+		PGA1_c30180	0.35	-0.3
3,156,365	+		PGA1_c30180	0.35	-0.8
3,156,370	+		PGA1_c30180	0.36	-2.2
3,156,380	+		PGA1_c30180	0.36	-0.9
3,156,387	-		PGA1_c30180	0.36	-1.4
3,156,404	-		PGA1_c30180	0.37	-2.2
3,156,421	+		PGA1_c30180	0.38	-1.8
3,156,455	+		PGA1_c30180	0.40	-1.5
3,156,491	+		PGA1_c30180	0.42	-1.5
3,156,573	+		PGA1_c30180	0.46	-0.6
3,156,580	+		PGA1_c30180	0.46	-2.1
3,156,588	-		PGA1_c30180	0.47	-1.6
3,156,627	-		PGA1_c30180	0.49	-0.2
3,156,634	+		PGA1_c30180	0.49	-0.9
3,156,634	-		PGA1_c30180	0.49	-1.7
3,156,634	-		PGA1_c30180	0.49	+0.3
3,156,642	-		PGA1_c30180	0.50	-1.0
3,156,645	+		PGA1_c30180	0.50	-1.9
3,156,662	-		PGA1_c30180	0.51	-1.5
3,156,698	+		PGA1_c30180	0.53	-1.3
3,156,698	+		PGA1_c30180	0.53	-0.4
3,156,698	+		PGA1_c30180	0.53	-0.9
3,156,706	-		PGA1_c30180	0.53	-0.3
3,156,729	+		PGA1_c30180	0.54	-1.0
3,156,735	+		PGA1_c30180	0.55	-1.0
3,156,770	+		PGA1_c30180	0.56	-1.9
3,156,873	+		PGA1_c30180	0.62	-1.3
3,156,881	-		PGA1_c30180	0.62	-1.9
3,156,881	-		PGA1_c30180	0.62	-0.1
3,156,881	-		PGA1_c30180	0.62	-1.3
3,156,886	-		PGA1_c30180	0.62	-2.2
3,156,898	-		PGA1_c30180	0.63	-1.5
3,156,898	-		PGA1_c30180	0.63	-1.3
3,156,961	+		PGA1_c30180	0.66	-2.3
3,156,961	+		PGA1_c30180	0.66	-2.7
3,156,961	+		PGA1_c30180	0.66	-2.0
3,156,962	-		PGA1_c30180	0.66	-0.5
3,156,965	+		PGA1_c30180	0.67	-0.9
3,156,965	+		PGA1_c30180	0.67	-1.3
3,156,965	+		PGA1_c30180	0.67	-1.5
3,157,035	-		PGA1_c30180	0.70	-2.8
3,157,040	+		PGA1_c30180	0.70	-2.3
3,157,041	-		PGA1_c30180	0.70	-1.3
3,157,047	-		PGA1_c30180	0.71	-0.3
3,157,076	+		PGA1_c30180	0.72	-2.3
3,157,077	-		PGA1_c30180	0.72	-1.4
3,157,084	+		PGA1_c30180	0.73	-1.6
3,157,084	-		PGA1_c30180	0.73	-1.2
3,157,084	-		PGA1_c30180	0.73	-1.8
3,157,084	-		PGA1_c30180	0.73	+0.3
3,157,084	-		PGA1_c30180	0.73	-2.8
3,157,084	-		PGA1_c30180	0.73	-2.1
3,157,092	-		PGA1_c30180	0.73	+0.8
3,157,133	+		PGA1_c30180	0.75	-0.8
3,157,136	-		PGA1_c30180	0.75	-1.2
3,157,187	+		PGA1_c30180	0.78	-1.4
3,157,192	+		PGA1_c30180	0.78	-2.4
3,157,231	-		PGA1_c30180	0.80	-1.3
3,157,238	-		PGA1_c30180	0.81	-2.0
3,157,241	+		PGA1_c30180	0.81	-1.6
3,157,251	+		PGA1_c30180	0.81	-0.5
3,157,259	-		PGA1_c30180	0.82	-1.2
3,157,311	+		PGA1_c30180	0.85	-0.5
3,157,319	+		PGA1_c30180	0.85	+0.0
3,157,319	-		PGA1_c30180	0.85	-3.3
3,157,319	-		PGA1_c30180	0.85	-1.0
3,157,326	+		PGA1_c30180	0.85	-2.0
3,157,334	-		PGA1_c30180	0.86	-0.6
3,157,334	-		PGA1_c30180	0.86	-1.3
3,157,334	-		PGA1_c30180	0.86	-1.3
3,157,340	+		PGA1_c30180	0.86	-1.6
3,157,396	-		PGA1_c30180	0.89	-3.5
3,157,407	+		PGA1_c30180	0.89	-2.1
3,157,457	-				-2.0
3,157,479	-				-1.9
3,157,741	-				+0.5
3,157,759	+				+0.3
3,157,764	+				+1.1
3,157,777	-				-0.3
3,157,777	-				-1.0
3,157,786	+				-0.4
3,157,805	+				-0.2
3,157,810	+				+0.4
3,157,813	-				+0.5
3,158,393	+				+0.8
3,158,415	+				-0.8
3,158,415	+				-1.2
3,158,415	+				-0.9
3,158,415	+				-1.0
3,158,415	+				-0.9
3,158,415	+				-0.1
3,158,415	+				-0.8
3,158,415	+				-0.8
3,158,415	+				-1.0
3,158,415	+				-0.8
3,158,415	+				-0.4
3,158,415	+				-0.1
3,158,415	+				+1.4
3,158,415	+				-0.1
3,158,415	+				-0.3
3,158,415	+				+0.1
3,158,415	+				-0.1
3,158,415	+				-1.4
3,158,415	+				+0.1
3,158,415	+				+0.7
3,158,415	+				+0.4
3,158,415	+				-0.1
3,158,415	+				+0.2
3,158,415	+				-1.3
3,158,415	+				-0.4
3,158,415	+				-0.7
3,158,415	+				+0.4
3,158,415	+				+0.2
3,158,415	+				-0.8
3,158,415	+				+0.4
3,158,415	+				+0.1
3,158,415	+				+0.4
3,158,415	+				-1.0
3,158,415	+				-0.3
3,158,423	-				+0.8
3,158,423	-				-0.1
3,158,423	-				+0.4
3,158,423	-				+0.2
3,158,423	-				-0.2
3,158,423	-				-0.3
3,158,423	-				+1.1
3,158,423	-				+0.9
3,158,423	-				-1.1
3,158,423	-				-0.7
3,158,423	-				-1.6
3,158,423	-				-2.0
3,158,423	-				+0.2
3,158,423	-				-0.9
3,158,423	-				-2.0
3,158,423	-				+0.5
3,158,423	-				+0.9
3,158,423	-				-0.5
3,158,423	-				-1.4
3,158,423	-				+0.1
3,158,423	-				-0.8
3,158,423	-				-0.3
3,158,423	-				+0.4
3,158,423	-				-1.7
3,158,423	-				-0.3
3,158,423	-				+0.1
3,158,423	-				-0.6
3,158,423	-				-0.3
3,158,423	-				-0.6
3,158,423	-				-0.7
3,158,470	+				+0.1
3,158,470	+				-1.5
3,158,560	+		PGA1_c30200	0.10	-2.9