Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1868

Experiment: LB 30C timecourse1 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 2
1,976,544	+		Psest_1865	0.55	+0.2
1,976,932	-				+0.6
1,976,932	-				-1.9
1,976,932	-				+0.0
1,976,932	-				-0.6
1,976,932	-				+0.0
1,976,932	-				-0.2
1,976,932	-				+0.5
1,976,968	+		Psest_1866	0.12	-0.7
1,976,968	+		Psest_1866	0.12	-0.2
1,976,968	+		Psest_1866	0.12	-0.3
1,976,968	+		Psest_1866	0.12	+0.3
1,976,969	-		Psest_1866	0.13	+0.1
1,976,969	-		Psest_1866	0.13	-0.2
1,976,969	-		Psest_1866	0.13	-1.4
1,976,969	-		Psest_1866	0.13	+0.1
1,976,969	-		Psest_1866	0.13	-1.0
1,976,969	-		Psest_1866	0.13	+1.1
1,976,969	-		Psest_1866	0.13	-1.5
1,977,073	+		Psest_1866	0.37	+0.0
1,977,073	+		Psest_1866	0.37	-0.1
1,977,073	+		Psest_1866	0.37	-0.6
1,977,073	+		Psest_1866	0.37	-0.0
1,977,073	+		Psest_1866	0.37	+0.1
1,977,074	-		Psest_1866	0.38	+0.1
1,977,074	-		Psest_1866	0.38	-0.9
1,977,096	-		Psest_1866	0.43	+0.2
1,977,176	+		Psest_1866	0.62	-1.5
1,977,237	+		Psest_1866	0.76	-1.0
1,977,237	+		Psest_1866	0.76	-0.8
1,977,579	+				-2.0
1,977,579	+				+0.6
1,977,580	-		Psest_1868	0.10	-1.5
1,977,884	+		Psest_1868	0.62	-0.8
1,977,884	+		Psest_1868	0.62	+1.3
1,977,885	-		Psest_1868	0.62	+0.3
1,977,885	-		Psest_1868	0.62	-1.2
1,977,885	-		Psest_1868	0.62	-1.1
1,977,933	+		Psest_1868	0.70	-1.2
1,977,933	+		Psest_1868	0.70	-1.5
1,977,933	+		Psest_1868	0.70	-1.7
1,977,933	+		Psest_1868	0.70	-0.4
1,978,032	+		Psest_1868	0.87	-0.2
1,978,033	-		Psest_1868	0.87	+1.0
1,978,033	-		Psest_1868	0.87	-1.0
1,978,116	+				-2.9
1,978,116	+				+0.3
1,978,183	+				+1.0
1,978,252	+				+0.4
1,978,252	+				-1.9
1,978,252	+				-2.2
1,978,252	+				-0.9
1,978,253	-				-0.2
1,978,253	-				+0.4
1,978,254	+				-0.2
1,978,254	+				+0.4
1,978,254	+				+0.3
1,978,254	+				+0.5
1,978,255	-				+0.3
1,978,255	-				+0.1
1,978,662	-		Psest_1869	0.18	-0.3
1,978,741	+		Psest_1869	0.22	+2.3
1,978,742	-		Psest_1869	0.22	-0.5
1,978,900	+		Psest_1869	0.29	+0.0