Strain Fitness in Marinobacter adhaerens HP15 around HP15_1767

Experiment: acetate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1766 and HP15_1767 are separated by 215 nucleotidesHP15_1767 and HP15_1768 are separated by 33 nucleotidesHP15_1768 and HP15_1769 are separated by 41 nucleotides HP15_1766: HP15_1766 - FAD dependent oxidoreductase, at 1,864,780 to 1,865,808 _1766 HP15_1767: HP15_1767 - hypothetical protein, at 1,866,024 to 1,866,311 _1767 HP15_1768: HP15_1768 - delta 9 acyl-lipid fatty acid desaturase, at 1,866,345 to 1,866,881 _1768 HP15_1769: HP15_1769 - transcriptional regulator-related protein, at 1,866,923 to 1,867,345 _1769 Position (kb) 1866 1867Strain fitness (log2 ratio) -2 -1 0 1 2at 1865.132 kb on + strand, within HP15_1766at 1865.132 kb on + strand, within HP15_1766at 1865.132 kb on + strand, within HP15_1766at 1865.218 kb on - strand, within HP15_1766at 1865.366 kb on + strand, within HP15_1766at 1865.434 kb on - strand, within HP15_1766at 1865.436 kb on + strand, within HP15_1766at 1865.552 kb on - strand, within HP15_1766at 1865.552 kb on - strand, within HP15_1766at 1865.606 kb on + strand, within HP15_1766at 1865.673 kb on + strand, within HP15_1766at 1865.706 kb on + strandat 1865.747 kb on - strandat 1865.756 kb on - strandat 1865.756 kb on - strandat 1865.773 kb on + strandat 1865.787 kb on + strandat 1865.843 kb on + strandat 1865.848 kb on + strandat 1865.878 kb on - strandat 1865.884 kb on - strandat 1866.058 kb on - strand, within HP15_1767at 1866.114 kb on + strand, within HP15_1767at 1866.126 kb on + strand, within HP15_1767at 1866.179 kb on + strand, within HP15_1767at 1866.229 kb on + strand, within HP15_1767at 1866.247 kb on - strand, within HP15_1767at 1866.253 kb on + strand, within HP15_1767at 1866.401 kb on - strand, within HP15_1768at 1866.445 kb on - strand, within HP15_1768at 1866.508 kb on + strand, within HP15_1768at 1866.619 kb on - strand, within HP15_1768at 1866.664 kb on + strand, within HP15_1768at 1866.716 kb on + strand, within HP15_1768at 1866.772 kb on + strand, within HP15_1768at 1866.772 kb on + strand, within HP15_1768at 1866.774 kb on - strand, within HP15_1768at 1866.799 kb on - strand, within HP15_1768at 1866.809 kb on + strand, within HP15_1768at 1866.862 kb on - strandat 1867.035 kb on + strand, within HP15_1769at 1867.036 kb on - strand, within HP15_1769at 1867.155 kb on + strand, within HP15_1769at 1867.155 kb on + strand, within HP15_1769at 1867.158 kb on - strand, within HP15_1769at 1867.158 kb on - strand, within HP15_1769at 1867.163 kb on - strand, within HP15_1769at 1867.163 kb on - strand, within HP15_1769at 1867.218 kb on - strand, within HP15_1769

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Per-strain Table

Position Strand Gene LocusTag Fraction acetate (C)
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1,865,132 + HP15_1766 0.34 -1.0
1,865,132 + HP15_1766 0.34 +0.9
1,865,132 + HP15_1766 0.34 -2.5
1,865,218 - HP15_1766 0.43 -0.2
1,865,366 + HP15_1766 0.57 +0.8
1,865,434 - HP15_1766 0.64 -1.1
1,865,436 + HP15_1766 0.64 +1.1
1,865,552 - HP15_1766 0.75 -0.3
1,865,552 - HP15_1766 0.75 +0.0
1,865,606 + HP15_1766 0.80 +1.0
1,865,673 + HP15_1766 0.87 -0.0
1,865,706 + +1.2
1,865,747 - -0.3
1,865,756 - -0.2
1,865,756 - -0.0
1,865,773 + -0.0
1,865,787 + -0.5
1,865,843 + +0.9
1,865,848 + -0.8
1,865,878 - -0.8
1,865,884 - +0.5
1,866,058 - HP15_1767 0.12 +0.9
1,866,114 + HP15_1767 0.31 +1.1
1,866,126 + HP15_1767 0.35 +1.1
1,866,179 + HP15_1767 0.54 +1.0
1,866,229 + HP15_1767 0.71 +1.8
1,866,247 - HP15_1767 0.77 +0.1
1,866,253 + HP15_1767 0.80 +0.0
1,866,401 - HP15_1768 0.10 +0.8
1,866,445 - HP15_1768 0.19 +0.2
1,866,508 + HP15_1768 0.30 +0.1
1,866,619 - HP15_1768 0.51 +1.1
1,866,664 + HP15_1768 0.59 -0.5
1,866,716 + HP15_1768 0.69 -0.4
1,866,772 + HP15_1768 0.80 -0.4
1,866,772 + HP15_1768 0.80 -2.0
1,866,774 - HP15_1768 0.80 +0.7
1,866,799 - HP15_1768 0.85 +1.1
1,866,809 + HP15_1768 0.86 -0.4
1,866,862 - +0.0
1,867,035 + HP15_1769 0.26 +0.7
1,867,036 - HP15_1769 0.27 -0.7
1,867,155 + HP15_1769 0.55 +1.1
1,867,155 + HP15_1769 0.55 -0.3
1,867,158 - HP15_1769 0.56 +1.1
1,867,158 - HP15_1769 0.56 +1.4
1,867,163 - HP15_1769 0.57 +0.1
1,867,163 - HP15_1769 0.57 +1.7
1,867,218 - HP15_1769 0.70 -0.3

Or see this region's nucleotide sequence