Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1390

Experiment: LB 30C timecourse1 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 2
1,497,722	-				-0.7
1,497,766	+				+0.1
1,497,766	+				+0.6
1,497,766	+				-0.9
1,497,766	+				-1.9
1,497,766	+				+1.1
1,497,767	-				+1.8
1,497,767	-				+0.6
1,497,767	-				+0.6
1,497,776	+				+1.1
1,497,965	+		Psest_1389	0.11	+1.1
1,497,965	+		Psest_1389	0.11	+1.1
1,498,139	+		Psest_1389	0.40	+0.4
1,498,139	+		Psest_1389	0.40	+0.2
1,498,140	-		Psest_1389	0.40	+0.7
1,498,140	-		Psest_1389	0.40	+3.4
1,498,140	-		Psest_1389	0.40	+2.7
1,498,140	-		Psest_1389	0.40	+0.2
1,498,284	+		Psest_1389	0.63	-1.2
1,498,285	-		Psest_1389	0.64	-2.1
1,498,308	+		Psest_1389	0.67	+2.1
1,498,308	+		Psest_1389	0.67	+0.1
1,498,308	+		Psest_1389	0.67	+1.4
1,498,308	+		Psest_1389	0.67	+0.5
1,498,308	+		Psest_1389	0.67	+2.1
1,498,308	+		Psest_1389	0.67	+1.5
1,498,309	-		Psest_1389	0.67	-2.1
1,498,309	-		Psest_1389	0.67	+1.7
1,498,568	-				+0.4
1,498,627	+		Psest_1390	0.11	+1.3
1,498,714	+		Psest_1390	0.20	-0.3
1,498,835	-		Psest_1390	0.34	+0.1
1,498,835	-		Psest_1390	0.34	-0.2
1,499,014	+		Psest_1390	0.53	+1.1
1,499,014	+		Psest_1390	0.53	+2.4
1,499,014	+		Psest_1390	0.53	-1.5
1,499,014	+		Psest_1390	0.53	+0.3
1,499,015	-		Psest_1390	0.53	+0.2
1,499,015	-		Psest_1390	0.53	+2.3
1,499,346	+		Psest_1390	0.89	-0.5
1,499,426	+				-0.6
1,499,427	-				+0.3
1,499,427	-				+0.5
1,499,427	-				+1.1
1,500,015	+		Psest_1391	0.45	+1.4
1,500,016	-		Psest_1391	0.45	+0.7
1,500,159	+		Psest_1391	0.58	+1.5
1,500,159	+		Psest_1391	0.58	-1.2
1,500,159	+		Psest_1391	0.58	+0.1
1,500,159	+		Psest_1391	0.58	+2.4
1,500,159	+		Psest_1391	0.58	-1.2
1,500,160	-		Psest_1391	0.58	+1.3
1,500,160	-		Psest_1391	0.58	+0.5
1,500,160	-		Psest_1391	0.58	+1.5
1,500,381	+		Psest_1391	0.78	+1.7
1,500,381	+		Psest_1391	0.78	+0.1
1,500,382	-		Psest_1391	0.78	+0.7