Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1229

Experiment: LB 30C timecourse1 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 2
1,334,729	+		Psest_1228	0.28	-0.2
1,334,729	+		Psest_1228	0.28	-0.5
1,334,729	+		Psest_1228	0.28	-1.2
1,334,730	-		Psest_1228	0.28	-0.9
1,334,730	-		Psest_1228	0.28	-0.9
1,334,730	-		Psest_1228	0.28	+0.6
1,334,826	+		Psest_1228	0.36	-0.5
1,334,826	+		Psest_1228	0.36	+0.2
1,334,827	-		Psest_1228	0.36	-0.4
1,334,900	+		Psest_1228	0.42	+0.2
1,334,900	+		Psest_1228	0.42	+0.2
1,334,900	+		Psest_1228	0.42	+0.5
1,334,901	-		Psest_1228	0.42	+0.5
1,334,901	-		Psest_1228	0.42	+0.0
1,334,901	-		Psest_1228	0.42	+0.1
1,334,901	-		Psest_1228	0.42	+0.1
1,335,098	+		Psest_1228	0.59	-0.5
1,335,099	-		Psest_1228	0.59	+0.2
1,335,158	+		Psest_1228	0.64	+0.1
1,335,158	+		Psest_1228	0.64	+0.3
1,335,159	-		Psest_1228	0.64	+0.3
1,335,413	+		Psest_1228	0.86	+0.9
1,335,491	+				-0.2
1,335,492	-				-0.2
1,335,492	-				-0.5
1,335,682	+				+1.0
1,335,683	-				-1.2
1,336,134	+		Psest_1229	0.25	-0.1
1,336,135	-		Psest_1229	0.25	+0.8
1,336,135	-		Psest_1229	0.25	+0.9
1,336,135	-		Psest_1229	0.25	+0.7
1,336,135	-		Psest_1229	0.25	+1.1
1,336,570	-		Psest_1229	0.48	+1.4
1,336,573	-		Psest_1229	0.49	+0.8
1,336,756	-		Psest_1229	0.59	+0.8
1,336,767	-		Psest_1229	0.59	+0.4
1,336,873	+		Psest_1229	0.65	-0.5
1,336,938	+		Psest_1229	0.69	+0.3
1,336,938	+		Psest_1229	0.69	+0.1
1,336,938	+		Psest_1229	0.69	+0.6
1,336,939	-		Psest_1229	0.69	+2.3
1,336,939	-		Psest_1229	0.69	-0.3
1,337,120	+		Psest_1229	0.78	+1.0
1,337,151	-		Psest_1229	0.80	+0.4
1,337,151	-		Psest_1229	0.80	+1.0
1,337,604	+		Psest_1230	0.29	+0.3
1,337,772	+		Psest_1230	0.85	-0.4
1,337,772	+		Psest_1230	0.85	-1.2
1,337,772	+		Psest_1230	0.85	-0.9
1,337,785	-		Psest_1230	0.90	-0.0
1,337,905	+				-0.0
1,337,905	+				-0.4
1,337,905	+				-0.8
1,337,905	+				+0.0
1,337,906	-				-0.2
1,337,906	-				-1.2
1,337,906	-				-0.1
1,337,906	-				+0.8
1,337,926	+				-0.7
1,337,962	+				-0.9
1,337,963	-				-0.9
1,338,052	-		Psest_1231	0.12	-0.5
1,338,154	+		Psest_1231	0.20	+0.1
1,338,154	+		Psest_1231	0.20	+1.7
1,338,155	-		Psest_1231	0.20	-0.0
1,338,221	-		Psest_1231	0.25	+0.2
1,338,221	-		Psest_1231	0.25	+1.1
1,338,221	-		Psest_1231	0.25	+0.5
1,338,221	-		Psest_1231	0.25	+1.4
1,338,233	-		Psest_1231	0.26	+0.4
1,338,366	+		Psest_1231	0.35	-0.8
1,338,463	+		Psest_1231	0.42	+0.9
1,338,463	+		Psest_1231	0.42	-1.2
1,338,464	-		Psest_1231	0.42	+0.0
1,338,464	-		Psest_1231	0.42	+0.3
1,338,464	-		Psest_1231	0.42	-0.5