Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1122

Experiment: LB 30C timecourse1 timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 30C timecourse1 timepoint 2
1,214,745	-		Psest_1121	0.38	+0.4
1,214,984	+		Psest_1121	0.81	-0.2
1,214,984	+		Psest_1121	0.81	+0.7
1,214,984	+		Psest_1121	0.81	+1.4
1,214,984	+		Psest_1121	0.81	+0.2
1,214,984	+		Psest_1121	0.81	-0.1
1,214,984	+		Psest_1121	0.81	-0.2
1,214,984	+		Psest_1121	0.81	+0.1
1,214,984	+		Psest_1121	0.81	-0.8
1,214,985	-		Psest_1121	0.81	-1.3
1,214,985	-		Psest_1121	0.81	-0.4
1,214,985	-		Psest_1121	0.81	+1.4
1,214,985	-		Psest_1121	0.81	+0.5
1,214,985	-		Psest_1121	0.81	-1.4
1,214,985	-		Psest_1121	0.81	-0.1
1,214,985	-		Psest_1121	0.81	+0.1
1,215,011	+		Psest_1121	0.86	+1.0
1,215,035	+				-0.1
1,215,035	+				-1.3
1,215,035	+				+0.3
1,215,035	+				+0.5
1,215,036	-				+0.5
1,215,036	-				+0.5
1,215,036	-				-0.2
1,215,036	-				-1.0
1,215,036	-				+0.2
1,215,036	-				+0.6
1,215,036	-				-0.6
1,215,036	-				-0.2
1,215,036	-				-0.6
1,215,036	-				-2.2
1,215,036	-				+1.0
1,215,036	-				-1.0
1,215,069	-				+0.9
1,215,069	-				-0.5
1,215,237	+				-0.5
1,215,238	-				+0.5
1,215,315	+				-0.6
1,215,316	-				+0.1
1,215,421	+				+0.2
1,215,501	+				+0.4
1,215,518	+				-0.3
1,215,519	-				+0.2
1,215,568	+				-0.4
1,215,572	-				-0.5
1,215,592	+				-0.3
1,215,592	+				-0.3
1,215,592	+				-0.4
1,215,593	-				+0.5
1,215,593	-				+0.3
1,215,613	+				+0.3
1,215,753	+				+1.4
1,215,754	-				+1.1
1,216,005	+		Psest_1122	0.18	+1.0
1,216,006	-		Psest_1122	0.18	+0.9
1,216,006	-		Psest_1122	0.18	+1.0
1,216,071	-		Psest_1122	0.22	+0.8
1,216,119	+		Psest_1122	0.25	+1.0
1,216,128	+		Psest_1122	0.25	+0.0
1,216,128	+		Psest_1122	0.25	+0.8
1,216,128	+		Psest_1122	0.25	+1.5
1,216,129	-		Psest_1122	0.25	+1.3
1,216,129	-		Psest_1122	0.25	+1.3
1,216,129	-		Psest_1122	0.25	+2.4
1,216,129	-		Psest_1122	0.25	+0.4
1,216,179	-		Psest_1122	0.28	+0.9
1,216,193	+		Psest_1122	0.29	+1.4
1,216,193	+		Psest_1122	0.29	+0.1
1,216,193	+		Psest_1122	0.29	+0.8
1,216,194	-		Psest_1122	0.29	+0.5
1,216,194	-		Psest_1122	0.29	+0.2
1,216,221	-		Psest_1122	0.30	+2.5
1,216,292	+		Psest_1122	0.34	+0.8
1,216,292	+		Psest_1122	0.34	+0.8
1,216,292	+		Psest_1122	0.34	+1.8
1,216,299	+		Psest_1122	0.35	+1.0
1,216,299	+		Psest_1122	0.35	+1.3
1,216,299	+		Psest_1122	0.35	+1.3
1,216,299	+		Psest_1122	0.35	+1.3
1,216,300	-		Psest_1122	0.35	-0.3
1,216,399	+		Psest_1122	0.40	+1.2
1,216,399	+		Psest_1122	0.40	+0.9
1,216,399	+		Psest_1122	0.40	+1.1
1,216,400	-		Psest_1122	0.40	+1.3
1,216,400	-		Psest_1122	0.40	+0.7
1,216,400	-		Psest_1122	0.40	+0.5
1,216,431	+		Psest_1122	0.42	+1.2
1,216,431	+		Psest_1122	0.42	+0.4
1,216,503	-		Psest_1122	0.46	+0.6
1,216,611	+		Psest_1122	0.52	+1.1
1,216,611	+		Psest_1122	0.52	+2.3
1,216,616	+		Psest_1122	0.52	+1.6
1,216,616	+		Psest_1122	0.52	+0.9
1,216,623	+		Psest_1122	0.53	+1.1
1,216,623	+		Psest_1122	0.53	+1.1
1,216,623	+		Psest_1122	0.53	+0.7
1,216,623	+		Psest_1122	0.53	+0.7
1,216,624	-		Psest_1122	0.53	+1.1
1,216,649	+		Psest_1122	0.54	+2.0
1,216,691	+		Psest_1122	0.56	+0.4
1,216,691	+		Psest_1122	0.56	+0.8
1,216,766	+		Psest_1122	0.61	+1.2
1,216,766	+		Psest_1122	0.61	+1.3
1,216,767	-		Psest_1122	0.61	+1.3
1,216,771	-		Psest_1122	0.61	+1.1
1,216,771	-		Psest_1122	0.61	+0.8
1,216,771	-		Psest_1122	0.61	+1.5
1,216,771	-		Psest_1122	0.61	+0.8
1,216,771	-		Psest_1122	0.61	+1.2
1,216,773	+		Psest_1122	0.61	+0.8
1,216,774	-		Psest_1122	0.61	+0.7
1,216,774	-		Psest_1122	0.61	+0.0
1,216,782	+		Psest_1122	0.61	+1.3
1,216,794	-		Psest_1122	0.62	+1.7
1,216,803	+		Psest_1122	0.63	+0.7
1,216,803	+		Psest_1122	0.63	+0.9
1,216,811	+		Psest_1122	0.63	+1.0
1,216,811	+		Psest_1122	0.63	+1.2
1,216,811	+		Psest_1122	0.63	+1.4
1,216,811	+		Psest_1122	0.63	+1.2
1,216,811	+		Psest_1122	0.63	+1.3
1,216,812	-		Psest_1122	0.63	-0.5
1,216,828	+		Psest_1122	0.64	+1.4
1,216,828	+		Psest_1122	0.64	+1.7
1,216,829	-		Psest_1122	0.64	+1.5
1,216,829	-		Psest_1122	0.64	+1.7
1,216,832	+		Psest_1122	0.64	+0.9
1,216,832	+		Psest_1122	0.64	+0.1
1,216,833	-		Psest_1122	0.64	+2.0
1,216,833	-		Psest_1122	0.64	+0.9
1,216,859	+		Psest_1122	0.66	+1.4
1,216,859	+		Psest_1122	0.66	+1.6
1,216,859	+		Psest_1122	0.66	+0.9
1,216,860	-		Psest_1122	0.66	+1.2
1,216,981	-		Psest_1122	0.72	+1.9
1,217,019	-		Psest_1122	0.75	+0.8
1,217,105	+		Psest_1122	0.79	+1.5
1,217,105	+		Psest_1122	0.79	+1.8
1,217,105	+		Psest_1122	0.79	+1.1
1,217,105	+		Psest_1122	0.79	+0.5
1,217,105	+		Psest_1122	0.79	+1.5
1,217,135	+		Psest_1122	0.81	+1.2
1,217,135	+		Psest_1122	0.81	+2.6
1,217,135	+		Psest_1122	0.81	+1.5
1,217,135	+		Psest_1122	0.81	+1.6
1,217,135	+		Psest_1122	0.81	+0.8
1,217,135	+		Psest_1122	0.81	+1.8
1,217,135	+		Psest_1122	0.81	+1.5
1,217,135	+		Psest_1122	0.81	+1.0
1,217,135	+		Psest_1122	0.81	+1.0
1,217,136	-		Psest_1122	0.81	+1.5
1,217,136	-		Psest_1122	0.81	+1.3
1,217,136	-		Psest_1122	0.81	+1.5
1,217,136	-		Psest_1122	0.81	+1.8
1,217,136	-		Psest_1122	0.81	+1.3
1,217,136	-		Psest_1122	0.81	+1.2
1,217,136	-		Psest_1122	0.81	+1.2
1,217,136	-		Psest_1122	0.81	-1.4
1,217,136	-		Psest_1122	0.81	+1.4
1,217,137	+		Psest_1122	0.81	+1.3
1,217,138	-		Psest_1122	0.81	+1.7
1,217,138	-		Psest_1122	0.81	+0.7
1,217,139	+		Psest_1122	0.81	+0.8
1,217,139	+		Psest_1122	0.81	+1.9
1,217,139	+		Psest_1122	0.81	+0.2
1,217,139	+		Psest_1122	0.81	+1.0
1,217,140	-		Psest_1122	0.81	-0.0
1,217,140	-		Psest_1122	0.81	+1.1
1,217,140	-		Psest_1122	0.81	+0.8
1,217,140	-		Psest_1122	0.81	+1.4
1,217,140	-		Psest_1122	0.81	-0.0
1,217,160	-		Psest_1122	0.82	+1.4
1,217,225	+		Psest_1122	0.86	+4.4
1,217,225	+		Psest_1122	0.86	+1.0
1,217,226	-		Psest_1122	0.86	+1.2
1,217,228	+		Psest_1122	0.86	+1.0
1,217,228	+		Psest_1122	0.86	+1.0
1,217,229	-		Psest_1122	0.86	+1.1
1,217,238	+		Psest_1122	0.87	+1.1
1,217,238	+		Psest_1122	0.87	+1.9
1,217,238	+		Psest_1122	0.87	+1.7
1,217,238	+		Psest_1122	0.87	+2.2
1,217,367	+				+1.2
1,217,368	-				+0.8
1,217,379	+				+0.5
1,217,379	+				+0.9
1,217,379	+				+1.3
1,217,379	+				+2.2
1,217,379	+				+0.5
1,217,379	+				+1.2
1,217,379	+				+0.9
1,217,379	+				+1.7
1,217,380	-				+0.9
1,217,380	-				+0.8
1,217,398	-				+0.1
1,217,421	+				+1.3
1,217,422	-				+0.8
1,217,475	+				+0.7
1,217,475	+				-0.4
1,217,476	-				+0.4
1,217,476	-				-0.5
1,217,550	+				-0.6
1,217,579	+				+1.0
1,217,599	+				-1.4
1,217,599	+				-0.2
1,217,599	+				-0.2
1,217,599	+				+1.6
1,217,600	-				+0.3
1,217,678	+				-1.6
1,217,850	+		Psest_1123	0.20	-1.4
1,217,850	+		Psest_1123	0.20	+0.5
1,217,850	+		Psest_1123	0.20	+0.8
1,217,850	+		Psest_1123	0.20	-0.1
1,217,851	-		Psest_1123	0.20	+0.1
1,217,851	-		Psest_1123	0.20	+0.9
1,217,851	-		Psest_1123	0.20	-0.6
1,217,851	-		Psest_1123	0.20	-0.4
1,217,907	+		Psest_1123	0.24	+0.0
1,217,907	+		Psest_1123	0.24	-0.2
1,217,907	+		Psest_1123	0.24	+0.2
1,217,907	+		Psest_1123	0.24	+1.5
1,217,908	-		Psest_1123	0.24	+0.4
1,217,920	+		Psest_1123	0.25	+0.1
1,218,043	-		Psest_1123	0.34	+0.2
1,218,043	-		Psest_1123	0.34	+0.9
1,218,045	+		Psest_1123	0.34	-0.3
1,218,046	-		Psest_1123	0.34	+0.4
1,218,046	-		Psest_1123	0.34	+1.1
1,218,046	-		Psest_1123	0.34	+0.2
1,218,159	-		Psest_1123	0.43	+1.8
1,218,159	-		Psest_1123	0.43	-0.8
1,218,162	+		Psest_1123	0.43	+0.1
1,218,162	+		Psest_1123	0.43	+0.2
1,218,162	+		Psest_1123	0.43	+0.0
1,218,162	+		Psest_1123	0.43	+0.0
1,218,162	+		Psest_1123	0.43	+1.5
1,218,163	-		Psest_1123	0.43	+0.1
1,218,163	-		Psest_1123	0.43	-0.0
1,218,163	-		Psest_1123	0.43	-0.4
1,218,163	-		Psest_1123	0.43	-0.6
1,218,351	+		Psest_1123	0.57	+0.1
1,218,351	+		Psest_1123	0.57	+0.7
1,218,352	-		Psest_1123	0.57	+0.1
1,218,352	-		Psest_1123	0.57	-2.1
1,218,352	-		Psest_1123	0.57	+0.3
1,218,352	-		Psest_1123	0.57	-0.1
1,218,352	-		Psest_1123	0.57	+1.3
1,218,397	-		Psest_1123	0.60	+0.1