Strain Fitness in Shewanella amazonensis SB2B around Sama_3604

Experiment: Anaero. fumarate (e.a.)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaero. fumarate (e.a.)
4,239,361	+		Sama_3603	0.52	-0.6
4,239,362	-		Sama_3603	0.52	-0.1
4,239,362	-		Sama_3603	0.52	+0.4
4,239,362	-		Sama_3603	0.52	+0.9
4,239,374	-		Sama_3603	0.52	+0.1
4,239,374	-		Sama_3603	0.52	+1.0
4,239,393	+		Sama_3603	0.53	+1.3
4,239,394	-		Sama_3603	0.53	+1.5
4,239,426	-		Sama_3603	0.55	-0.4
4,239,426	-		Sama_3603	0.55	-1.0
4,239,426	-		Sama_3603	0.55	-0.2
4,239,465	+		Sama_3603	0.57	+1.6
4,239,465	+		Sama_3603	0.57	+0.9
4,239,465	+		Sama_3603	0.57	+1.5
4,239,466	-		Sama_3603	0.57	+0.3
4,239,499	-		Sama_3603	0.59	-2.4
4,239,504	+		Sama_3603	0.59	-0.5
4,239,504	+		Sama_3603	0.59	-1.6
4,239,505	-		Sama_3603	0.59	+0.2
4,239,505	-		Sama_3603	0.59	+1.0
4,239,505	-		Sama_3603	0.59	+3.1
4,239,619	+		Sama_3603	0.65	-2.7
4,239,619	+		Sama_3603	0.65	-0.5
4,239,619	+		Sama_3603	0.65	-1.0
4,239,619	+		Sama_3603	0.65	-0.3
4,239,619	+		Sama_3603	0.65	+1.9
4,239,620	-		Sama_3603	0.65	-0.3
4,239,620	-		Sama_3603	0.65	-2.0
4,239,620	-		Sama_3603	0.65	-0.7
4,239,620	-		Sama_3603	0.65	-0.3
4,239,620	-		Sama_3603	0.65	+0.1
4,239,620	-		Sama_3603	0.65	-0.4
4,239,620	-		Sama_3603	0.65	-1.3
4,239,620	-		Sama_3603	0.65	-0.9
4,239,620	-		Sama_3603	0.65	-0.1
4,239,620	-		Sama_3603	0.65	-1.1
4,239,622	+		Sama_3603	0.65	-0.9
4,239,623	-		Sama_3603	0.65	-2.2
4,239,623	-		Sama_3603	0.65	-0.0
4,239,623	-		Sama_3603	0.65	+1.7
4,239,623	-		Sama_3603	0.65	+1.6
4,239,630	+		Sama_3603	0.65	+0.9
4,239,630	+		Sama_3603	0.65	-1.1
4,239,630	+		Sama_3603	0.65	-0.4
4,239,630	+		Sama_3603	0.65	-1.0
4,239,631	-		Sama_3603	0.66	-1.3
4,239,631	-		Sama_3603	0.66	+3.3
4,239,631	-		Sama_3603	0.66	-3.1
4,239,631	-		Sama_3603	0.66	-0.5
4,239,638	-		Sama_3603	0.66	-2.7
4,239,638	-		Sama_3603	0.66	-0.3
4,239,663	+		Sama_3603	0.67	+0.1
4,239,664	-		Sama_3603	0.67	+0.5
4,239,664	-		Sama_3603	0.67	-2.8
4,239,664	-		Sama_3603	0.67	+1.3
4,239,664	-		Sama_3603	0.67	-0.5
4,239,674	+		Sama_3603	0.68	+1.0
4,239,674	+		Sama_3603	0.68	+0.2
4,239,674	+		Sama_3603	0.68	-1.5
4,239,675	-		Sama_3603	0.68	+0.6
4,239,675	-		Sama_3603	0.68	-0.3
4,239,675	-		Sama_3603	0.68	-0.2
4,239,675	-		Sama_3603	0.68	+0.4
4,239,678	+		Sama_3603	0.68	-0.4
4,239,678	+		Sama_3603	0.68	-2.4
4,239,679	-		Sama_3603	0.68	+0.4
4,239,679	-		Sama_3603	0.68	-0.1
4,239,679	-		Sama_3603	0.68	-1.7
4,239,847	+		Sama_3603	0.77	+1.0
4,239,862	+		Sama_3603	0.78	+0.2
4,239,862	+		Sama_3603	0.78	+4.0
4,239,862	+		Sama_3603	0.78	+0.4
4,239,863	-		Sama_3603	0.78	+0.5
4,239,863	-		Sama_3603	0.78	-0.3
4,239,863	-		Sama_3603	0.78	+0.2
4,239,863	-		Sama_3603	0.78	+0.2
4,239,970	+		Sama_3603	0.83	+0.2
4,239,971	-		Sama_3603	0.83	-0.4
4,240,002	+		Sama_3603	0.85	+1.0
4,240,002	+		Sama_3603	0.85	-0.8
4,240,002	+		Sama_3603	0.85	+0.5
4,240,002	+		Sama_3603	0.85	-1.7
4,240,003	-		Sama_3603	0.85	-2.3
4,240,003	-		Sama_3603	0.85	+1.4
4,240,003	-		Sama_3603	0.85	+2.3
4,240,017	+		Sama_3603	0.86	-0.9
4,240,039	+		Sama_3603	0.87	+0.6
4,240,039	+		Sama_3603	0.87	-0.5
4,240,039	+		Sama_3603	0.87	+2.6
4,240,039	+		Sama_3603	0.87	-0.1
4,240,040	-		Sama_3603	0.87	-2.5
4,240,076	-		Sama_3603	0.89	+0.5
4,240,076	-		Sama_3603	0.89	-1.9
4,240,081	+		Sama_3603	0.89	-0.0
4,240,082	-		Sama_3603	0.89	+1.5
4,240,096	+		Sama_3603	0.90	+0.1
4,240,128	-				-1.5
4,240,175	+				+2.4
4,240,210	+				+0.8
4,240,221	+				+0.9
4,240,221	+				+1.4
4,240,221	+				+0.3
4,240,221	+				-0.8
4,240,222	-				+0.1
4,240,222	-				+1.1
4,240,222	-				+0.3
4,240,222	-				-2.8
4,240,222	-				-1.5
4,240,222	-				+1.4
4,240,222	-				+1.2
4,240,234	+				-1.5
4,240,234	+				-0.4
4,240,292	+				-0.8
4,240,292	+				+1.5
4,240,301	+				-0.1
4,240,301	+				+0.0
4,240,301	+				+0.5
4,240,302	-				-0.1
4,240,302	-				+0.3
4,240,304	+				+0.9
4,240,304	+				-0.9
4,240,304	+				-0.5
4,240,305	-				+0.9
4,240,305	-				+0.0
4,240,331	+				-2.0
4,240,344	+				+0.4
4,240,344	+				+0.4
4,240,344	+				+0.1
4,240,344	+				-0.9
4,240,344	+				-2.1
4,240,344	+				-0.4
4,240,344	+				+0.2
4,240,344	+				+0.1
4,240,344	+				-0.5
4,240,345	-				-2.2
4,240,345	-				-1.2
4,240,345	-				-0.6
4,240,345	-				-0.8
4,240,345	-				+0.5
4,240,345	-				+0.4
4,240,345	-				+0.4
4,240,345	-				-1.3
4,240,348	+				+0.2
4,240,348	+				-1.8
4,240,349	-				-0.9
4,240,349	-				-1.6
4,240,385	+				+0.7
4,240,385	+				-0.9
4,240,386	-				-1.6
4,240,405	-				-2.3
4,240,535	-		Sama_3604	0.14	-2.0
4,240,567	-		Sama_3604	0.17	-1.5
4,240,687	-		Sama_3604	0.26	-1.6
4,240,687	-		Sama_3604	0.26	-1.2
4,240,687	-		Sama_3604	0.26	+0.9
4,240,713	+		Sama_3604	0.28	-0.2
4,240,713	+		Sama_3604	0.28	+0.9
4,240,714	-		Sama_3604	0.28	-0.5
4,240,714	-		Sama_3604	0.28	-0.5
4,240,714	-		Sama_3604	0.28	-0.9
4,240,714	-		Sama_3604	0.28	-2.0
4,240,762	-		Sama_3604	0.31	+0.1
4,240,762	-		Sama_3604	0.31	-1.3
4,240,778	+		Sama_3604	0.33	-1.0
4,240,839	+		Sama_3604	0.37	-0.3
4,240,839	+		Sama_3604	0.37	-2.7
4,240,839	+		Sama_3604	0.37	-2.6
4,240,839	+		Sama_3604	0.37	-2.0
4,240,840	-		Sama_3604	0.37	-0.1
4,240,840	-		Sama_3604	0.37	-0.9
4,240,872	+		Sama_3604	0.40	+0.3
4,240,873	-		Sama_3604	0.40	-0.1
4,240,916	+		Sama_3604	0.43	-2.6
4,240,916	+		Sama_3604	0.43	-0.3
4,240,917	-		Sama_3604	0.43	-0.9
4,240,953	+		Sama_3604	0.46	+0.1
4,240,954	-		Sama_3604	0.46	+0.1
4,240,954	-		Sama_3604	0.46	+0.7
4,241,086	+		Sama_3604	0.56	+0.1
4,241,086	+		Sama_3604	0.56	-0.3
4,241,087	-		Sama_3604	0.56	-1.5
4,241,087	-		Sama_3604	0.56	-2.0
4,241,257	+		Sama_3604	0.68	-2.0
4,241,257	+		Sama_3604	0.68	-1.8
4,241,257	+		Sama_3604	0.68	-2.1
4,241,338	+		Sama_3604	0.75	-0.1
4,241,338	+		Sama_3604	0.75	-2.1
4,241,339	-		Sama_3604	0.75	+0.3
4,241,340	+		Sama_3604	0.75	-0.3
4,241,340	+		Sama_3604	0.75	-1.0
4,241,340	+		Sama_3604	0.75	-0.5
4,241,340	+		Sama_3604	0.75	-0.5
4,241,340	+		Sama_3604	0.75	-0.8
4,241,340	+		Sama_3604	0.75	-0.2
4,241,340	+		Sama_3604	0.75	+1.5
4,241,340	+		Sama_3604	0.75	-0.4
4,241,340	+		Sama_3604	0.75	-0.5
4,241,340	+		Sama_3604	0.75	-1.0
4,241,340	+		Sama_3604	0.75	+0.3
4,241,340	+		Sama_3604	0.75	-0.5
4,241,340	+		Sama_3604	0.75	-1.4
4,241,340	+		Sama_3604	0.75	+1.0
4,241,340	+		Sama_3604	0.75	-0.7
4,241,340	+		Sama_3604	0.75	-1.2
4,241,340	+		Sama_3604	0.75	-0.6
4,241,340	+		Sama_3604	0.75	-1.5
4,241,341	-		Sama_3604	0.75	-0.9
4,241,341	-		Sama_3604	0.75	+0.7
4,241,341	-		Sama_3604	0.75	+0.9
4,241,341	-		Sama_3604	0.75	+0.3
4,241,341	-		Sama_3604	0.75	-0.0
4,241,341	-		Sama_3604	0.75	-1.6
4,241,341	-		Sama_3604	0.75	-2.4
4,241,341	-		Sama_3604	0.75	-0.3
4,241,341	-		Sama_3604	0.75	-1.3
4,241,341	-		Sama_3604	0.75	+0.3
4,241,341	-		Sama_3604	0.75	-1.6
4,241,341	-		Sama_3604	0.75	-1.0
4,241,341	-		Sama_3604	0.75	+0.2
4,241,341	-		Sama_3604	0.75	-1.0
4,241,359	-		Sama_3604	0.76	-0.1
4,241,389	+		Sama_3604	0.78	-2.0
4,241,389	+		Sama_3604	0.78	-2.3
4,241,401	+		Sama_3604	0.79	-2.5
4,241,402	-		Sama_3604	0.79	-1.4
4,241,435	-		Sama_3604	0.82	+1.3
4,241,455	-		Sama_3604	0.83	-0.1
4,241,468	-		Sama_3604	0.84	-0.4
4,241,490	+		Sama_3604	0.86	-1.2
4,241,490	+		Sama_3604	0.86	-2.5
4,241,490	+		Sama_3604	0.86	-1.1
4,241,491	-		Sama_3604	0.86	+0.5
4,241,491	-		Sama_3604	0.86	-1.1
4,241,491	-		Sama_3604	0.86	-1.9
4,241,499	+		Sama_3604	0.87	-1.5
4,241,499	+		Sama_3604	0.87	-0.4
4,241,499	+		Sama_3604	0.87	+1.3
4,241,500	-		Sama_3604	0.87	+0.3
4,241,530	+		Sama_3604	0.89	-0.8
4,241,530	+		Sama_3604	0.89	-1.5
4,241,571	+				+1.2
4,241,571	+				-1.7
4,241,571	+				-1.3
4,241,571	+				-0.9
4,241,571	+				-2.1
4,241,571	+				-0.3
4,241,571	+				-0.7
4,241,571	+				+0.2
4,241,571	+				-0.1
4,241,572	-				-3.7
4,241,572	-				-1.1
4,241,572	-				-0.9
4,241,572	-				-1.0
4,241,572	-				-0.6
4,241,572	-				-1.9
4,241,572	-				-0.9
4,241,620	+				-0.1
4,241,620	+				-0.6
4,241,620	+				-1.3
4,241,620	+				-0.1
4,241,620	+				-0.1
4,241,621	-				-3.0
4,241,621	-				-1.2
4,241,621	-				+1.0
4,241,621	-				-1.2
4,241,621	-				-1.1
4,241,621	-				-1.3
4,241,621	-				-2.9
4,241,697	+				-1.5
4,241,721	+				-0.9
4,241,757	+				+2.4
4,241,765	+				-0.6
4,241,765	+				-1.5
4,241,765	+				-1.1
4,241,765	+				+0.3
4,241,766	-				-1.1
4,241,766	-				-0.5
4,241,771	+				-0.6
4,241,772	-				+0.6
4,241,772	-				+0.1
4,241,772	-				-0.7
4,241,772	-				+1.6
4,241,772	-				-0.1
4,241,775	+				-1.7
4,241,775	+				-2.4
4,241,775	+				-0.4
4,241,775	+				-0.8
4,241,776	-				-2.1
4,241,776	-				+0.4
4,241,776	-				-0.7
4,241,776	-				-2.2
4,241,776	-				+0.9
4,241,816	+				-0.1
4,241,817	-				-1.4
4,241,822	-				+1.3
4,241,833	+				-0.6
4,241,862	+				-0.1
4,241,886	+				-0.9
4,241,886	+				-1.5
4,241,924	-				-0.1
4,241,970	+				-0.8
4,241,970	+				+0.7
4,241,990	+				-0.7
4,241,991	-				+1.1
4,241,997	+				+0.4
4,241,997	+				-1.0
4,241,997	+				-1.7
4,241,997	+				-0.3
4,241,997	+				-0.0
4,241,997	+				-1.4
4,241,997	+				+1.6
4,241,997	+				+1.2
4,241,998	-				-1.2
4,241,998	-				+2.0
4,241,998	-				-0.8
4,241,998	-				+0.6
4,241,998	-				+0.3
4,241,998	-				+0.4
4,241,998	-				-1.1
4,241,998	-				-0.5
4,242,035	+				-2.0
4,242,036	-				+1.9
4,242,046	+				-0.1
4,242,046	+				-0.5
4,242,046	+				-1.5
4,242,046	+				+1.5
4,242,047	-				+0.7
4,242,047	-				+0.9
4,242,047	-				+1.6
4,242,047	-				-0.2
4,242,047	-				-0.3
4,242,047	-				-0.1
4,242,056	+				+0.3
4,242,056	+				+2.3
4,242,057	-				+1.6
4,242,066	-				+1.9
4,242,117	+				+0.3
4,242,118	-				+0.9
4,242,156	+		Sama_3605	0.11	-0.4
4,242,156	+		Sama_3605	0.11	+0.8
4,242,168	+		Sama_3605	0.12	-2.5
4,242,168	+		Sama_3605	0.12	-0.2
4,242,168	+		Sama_3605	0.12	-0.8
4,242,169	-		Sama_3605	0.12	-0.5
4,242,192	+		Sama_3605	0.15	-0.0
4,242,192	+		Sama_3605	0.15	-0.3
4,242,192	+		Sama_3605	0.15	-0.9
4,242,193	-		Sama_3605	0.15	-0.3
4,242,193	-		Sama_3605	0.15	+0.1
4,242,193	-		Sama_3605	0.15	-2.8
4,242,225	+		Sama_3605	0.18	+0.7
4,242,246	+		Sama_3605	0.20	-1.3
4,242,247	-		Sama_3605	0.20	+2.4
4,242,288	+		Sama_3605	0.25	-1.3
4,242,288	+		Sama_3605	0.25	+0.8
4,242,288	+		Sama_3605	0.25	-0.1
4,242,288	+		Sama_3605	0.25	-1.7
4,242,288	+		Sama_3605	0.25	-1.1
4,242,288	+		Sama_3605	0.25	-1.6
4,242,288	+		Sama_3605	0.25	-1.3
4,242,288	+		Sama_3605	0.25	+1.2
4,242,289	-		Sama_3605	0.25	-0.7
4,242,289	-		Sama_3605	0.25	+0.1
4,242,289	-		Sama_3605	0.25	+0.5
4,242,289	-		Sama_3605	0.25	+0.4
4,242,289	-		Sama_3605	0.25	+1.3
4,242,289	-		Sama_3605	0.25	+0.4
4,242,289	-		Sama_3605	0.25	+2.2
4,242,289	-		Sama_3605	0.25	+0.4
4,242,291	+		Sama_3605	0.25	-0.5
4,242,291	+		Sama_3605	0.25	+1.2
4,242,291	+		Sama_3605	0.25	-0.7
4,242,291	+		Sama_3605	0.25	-1.3
4,242,291	+		Sama_3605	0.25	+0.3
4,242,291	+		Sama_3605	0.25	-3.5
4,242,291	+		Sama_3605	0.25	-1.7
4,242,291	+		Sama_3605	0.25	-1.1
4,242,292	-		Sama_3605	0.25	-0.9
4,242,292	-		Sama_3605	0.25	+2.2
4,242,292	-		Sama_3605	0.25	-0.1
4,242,292	-		Sama_3605	0.25	+1.1
4,242,292	-		Sama_3605	0.25	-0.4
4,242,292	-		Sama_3605	0.25	-0.5
4,242,292	-		Sama_3605	0.25	-0.5
4,242,292	-		Sama_3605	0.25	+1.2
4,242,292	-		Sama_3605	0.25	-0.1
4,242,308	+		Sama_3605	0.27	-1.5
4,242,308	+		Sama_3605	0.27	-0.5
4,242,308	+		Sama_3605	0.27	-0.6
4,242,308	+		Sama_3605	0.27	-0.1
4,242,308	+		Sama_3605	0.27	+0.3
4,242,308	+		Sama_3605	0.27	-0.0
4,242,308	+		Sama_3605	0.27	+1.4
4,242,308	+		Sama_3605	0.27	-1.8
4,242,309	-		Sama_3605	0.27	-1.7
4,242,309	-		Sama_3605	0.27	-0.8
4,242,309	-		Sama_3605	0.27	+0.3
4,242,309	-		Sama_3605	0.27	-1.3
4,242,309	-		Sama_3605	0.27	+1.0
4,242,309	-		Sama_3605	0.27	-1.0
4,242,310	+		Sama_3605	0.27	-1.9
4,242,310	+		Sama_3605	0.27	-2.5
4,242,310	+		Sama_3605	0.27	-0.8
4,242,310	+		Sama_3605	0.27	+0.4
4,242,310	+		Sama_3605	0.27	-2.7
4,242,310	+		Sama_3605	0.27	-1.5
4,242,310	+		Sama_3605	0.27	-1.4
4,242,310	+		Sama_3605	0.27	+0.6
4,242,310	+		Sama_3605	0.27	+0.0
4,242,310	+		Sama_3605	0.27	-0.5
4,242,310	+		Sama_3605	0.27	-1.6
4,242,311	-		Sama_3605	0.27	-0.7
4,242,311	-		Sama_3605	0.27	+0.8
4,242,311	-		Sama_3605	0.27	+1.2
4,242,311	-		Sama_3605	0.27	-0.3
4,242,311	-		Sama_3605	0.27	+0.6
4,242,311	-		Sama_3605	0.27	-0.9
4,242,311	-		Sama_3605	0.27	+3.7
4,242,311	-		Sama_3605	0.27	-0.5
4,242,311	-		Sama_3605	0.27	-0.2
4,242,313	+		Sama_3605	0.27	+0.7
4,242,313	+		Sama_3605	0.27	+0.7
4,242,313	+		Sama_3605	0.27	-0.8
4,242,313	+		Sama_3605	0.27	+2.0
4,242,314	-		Sama_3605	0.28	+1.3
4,242,357	+		Sama_3605	0.32	+1.4
4,242,357	+		Sama_3605	0.32	-0.7
4,242,358	-		Sama_3605	0.32	-0.5
4,242,421	+		Sama_3605	0.39	-1.1
4,242,439	+		Sama_3605	0.41	-1.3
4,242,531	+		Sama_3605	0.51	-0.1
4,242,533	+		Sama_3605	0.51	-0.7
4,242,533	+		Sama_3605	0.51	-0.0
4,242,534	-		Sama_3605	0.51	+0.2
4,242,534	-		Sama_3605	0.51	+0.5
4,242,534	-		Sama_3605	0.51	+0.5
4,242,574	+		Sama_3605	0.55	+0.8
4,242,574	+		Sama_3605	0.55	-1.3
4,242,574	+		Sama_3605	0.55	-0.7
4,242,575	-		Sama_3605	0.55	-1.9
4,242,575	-		Sama_3605	0.55	-2.2
4,242,575	-		Sama_3605	0.55	-0.4
4,242,575	-		Sama_3605	0.55	-1.9
4,242,606	+		Sama_3605	0.59	+0.1
4,242,606	+		Sama_3605	0.59	+1.1
4,242,616	+		Sama_3605	0.60	+1.3
4,242,616	+		Sama_3605	0.60	+2.6
4,242,616	+		Sama_3605	0.60	+0.1
4,242,616	+		Sama_3605	0.60	+0.8
4,242,616	+		Sama_3605	0.60	-0.6
4,242,616	+		Sama_3605	0.60	-2.0
4,242,616	+		Sama_3605	0.60	-1.6
4,242,616	+		Sama_3605	0.60	+0.9
4,242,616	+		Sama_3605	0.60	-1.1
4,242,616	+		Sama_3605	0.60	-0.9
4,242,617	-		Sama_3605	0.60	+0.6
4,242,617	-		Sama_3605	0.60	+0.6
4,242,617	-		Sama_3605	0.60	-1.1
4,242,617	-		Sama_3605	0.60	-0.7
4,242,617	-		Sama_3605	0.60	-1.0
4,242,617	-		Sama_3605	0.60	-0.0
4,242,617	-		Sama_3605	0.60	+2.2
4,242,617	-		Sama_3605	0.60	-1.2
4,242,617	-		Sama_3605	0.60	+0.3
4,242,617	-		Sama_3605	0.60	+0.5
4,242,617	-		Sama_3605	0.60	+0.5
4,242,617	-		Sama_3605	0.60	-0.4
4,242,617	-		Sama_3605	0.60	-0.3
4,242,617	-		Sama_3605	0.60	+0.5
4,242,617	-		Sama_3605	0.60	-0.9
4,242,653	+		Sama_3605	0.64	+0.2
4,242,664	+		Sama_3605	0.65	-0.5
4,242,664	+		Sama_3605	0.65	+0.2
4,242,664	+		Sama_3605	0.65	-1.7
4,242,664	+		Sama_3605	0.65	-1.7
4,242,665	-		Sama_3605	0.65	+0.4
4,242,665	-		Sama_3605	0.65	+0.3