Strain Fitness in Shewanella amazonensis SB2B around Sama_3430

Experiment: Anaero. fumarate (e.a.)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaero. fumarate (e.a.)
4,059,132	+				+0.6
4,059,133	-				-1.2
4,059,159	-				+0.6
4,059,165	+				-0.1
4,059,165	+				-0.5
4,059,165	+				-1.3
4,059,188	+				+1.8
4,059,188	+				-0.3
4,059,188	+				-1.0
4,059,189	-				-0.2
4,059,189	-				-0.7
4,059,218	-				-0.7
4,059,237	+				-1.8
4,059,237	+				+3.2
4,059,237	+				-0.6
4,059,237	+				+0.5
4,059,238	-				+1.4
4,059,238	-				-0.8
4,059,238	-				+0.5
4,059,269	+				+0.8
4,059,310	-				+0.5
4,059,310	-				-2.0
4,059,329	+				-0.2
4,059,329	+				-0.5
4,059,349	+				-1.9
4,059,403	+		Sama_3429	0.11	+1.1
4,059,403	+		Sama_3429	0.11	-1.5
4,059,403	+		Sama_3429	0.11	+0.1
4,059,403	+		Sama_3429	0.11	+1.2
4,059,404	-		Sama_3429	0.11	+0.6
4,059,404	-		Sama_3429	0.11	-2.5
4,059,404	-		Sama_3429	0.11	+1.8
4,059,404	-		Sama_3429	0.11	-1.9
4,059,404	-		Sama_3429	0.11	+1.0
4,059,404	-		Sama_3429	0.11	-0.7
4,059,404	-		Sama_3429	0.11	-0.9
4,059,404	-		Sama_3429	0.11	+0.8
4,059,407	-		Sama_3429	0.12	+0.1
4,059,407	-		Sama_3429	0.12	+0.8
4,059,407	-		Sama_3429	0.12	+0.2
4,059,407	-		Sama_3429	0.12	-2.2
4,059,460	+		Sama_3429	0.21	+1.8
4,059,460	+		Sama_3429	0.21	-1.2
4,059,460	+		Sama_3429	0.21	+1.3
4,059,461	-		Sama_3429	0.21	+0.3
4,059,461	-		Sama_3429	0.21	+0.4
4,059,461	-		Sama_3429	0.21	-0.4
4,059,461	-		Sama_3429	0.21	-0.5
4,059,507	+		Sama_3429	0.29	-0.7
4,059,507	+		Sama_3429	0.29	+0.3
4,059,508	-		Sama_3429	0.30	+0.4
4,059,519	+		Sama_3429	0.32	-0.5
4,059,535	+		Sama_3429	0.34	+0.3
4,059,536	-		Sama_3429	0.35	+0.3
4,059,557	-		Sama_3429	0.38	-0.4
4,059,557	-		Sama_3429	0.38	-0.7
4,059,557	-		Sama_3429	0.38	+0.5
4,059,557	-		Sama_3429	0.38	+0.4
4,059,557	-		Sama_3429	0.38	+1.3
4,059,611	+		Sama_3429	0.48	+0.7
4,059,611	+		Sama_3429	0.48	-0.8
4,059,611	+		Sama_3429	0.48	+0.6
4,059,611	+		Sama_3429	0.48	-0.7
4,059,612	-		Sama_3429	0.48	-0.7
4,059,612	-		Sama_3429	0.48	+1.1
4,059,625	+		Sama_3429	0.50	+1.0
4,059,625	+		Sama_3429	0.50	+1.5
4,059,625	+		Sama_3429	0.50	+2.0
4,059,625	+		Sama_3429	0.50	-0.9
4,059,625	+		Sama_3429	0.50	+0.0
4,059,625	+		Sama_3429	0.50	+1.7
4,059,626	-		Sama_3429	0.50	+0.6
4,059,626	-		Sama_3429	0.50	-0.1
4,059,629	+		Sama_3429	0.51	+1.1
4,059,630	-		Sama_3429	0.51	-0.7
4,059,740	-		Sama_3429	0.70	+0.3
4,059,740	-		Sama_3429	0.70	+0.8
4,059,749	-		Sama_3429	0.72	-1.7
4,059,763	-		Sama_3429	0.74	+0.4
4,059,826	+		Sama_3429	0.85	-0.5
4,059,826	+		Sama_3429	0.85	+0.6
4,059,826	+		Sama_3429	0.85	+0.1
4,059,826	+		Sama_3429	0.85	-1.5
4,059,827	-		Sama_3429	0.86	-1.2
4,059,827	-		Sama_3429	0.86	-0.8
4,059,939	-				-1.6
4,059,939	-				-0.1
4,059,984	-				+0.7
4,059,989	+				-0.6
4,059,989	+				-0.7
4,059,989	+				+0.0
4,059,989	+				-1.6
4,059,990	-				-0.7
4,059,990	-				-0.2
4,059,990	-				-0.2
4,059,990	-				-2.4
4,059,990	-				+0.3
4,059,995	-				+0.1
4,059,995	-				-2.2
4,060,018	+				-1.3
4,060,018	+				-0.2
4,060,019	-				-1.5
4,060,028	+				+0.3
4,060,091	+				+1.1
4,060,091	+				-1.2
4,060,092	-				-1.8
4,060,092	-				-0.1
4,060,092	-				+0.1
4,060,144	-				-1.2
4,060,221	+		Sama_3430	0.15	-2.3
4,060,222	-		Sama_3430	0.15	-3.0
4,060,222	-		Sama_3430	0.15	-2.6
4,060,227	+		Sama_3430	0.16	-1.4
4,060,227	+		Sama_3430	0.16	-0.6
4,060,227	+		Sama_3430	0.16	-1.7
4,060,227	+		Sama_3430	0.16	+0.8
4,060,228	-		Sama_3430	0.16	-1.3
4,060,228	-		Sama_3430	0.16	-0.2
4,060,228	-		Sama_3430	0.16	-2.1
4,060,228	-		Sama_3430	0.16	-1.0
4,060,228	-		Sama_3430	0.16	-2.5
4,060,386	+		Sama_3430	0.34	-1.3
4,060,387	-		Sama_3430	0.34	-0.7
4,060,388	+		Sama_3430	0.34	-0.9
4,060,388	+		Sama_3430	0.34	-2.1
4,060,388	+		Sama_3430	0.34	-1.3
4,060,388	+		Sama_3430	0.34	-0.6
4,060,388	+		Sama_3430	0.34	+0.3
4,060,388	+		Sama_3430	0.34	-1.2
4,060,388	+		Sama_3430	0.34	-0.9
4,060,388	+		Sama_3430	0.34	-2.3
4,060,388	+		Sama_3430	0.34	-1.2
4,060,388	+		Sama_3430	0.34	-1.6
4,060,388	+		Sama_3430	0.34	-0.2
4,060,389	-		Sama_3430	0.34	-2.0
4,060,389	-		Sama_3430	0.34	-1.7
4,060,389	-		Sama_3430	0.34	-2.6
4,060,389	-		Sama_3430	0.34	-1.0
4,060,389	-		Sama_3430	0.34	-0.7
4,060,389	-		Sama_3430	0.34	-1.7
4,060,389	-		Sama_3430	0.34	-2.1
4,060,389	-		Sama_3430	0.34	-0.7
4,060,389	-		Sama_3430	0.34	+0.1
4,060,389	-		Sama_3430	0.34	-1.2
4,060,389	-		Sama_3430	0.34	-2.2
4,060,389	-		Sama_3430	0.34	-1.7
4,060,389	-		Sama_3430	0.34	-3.0
4,060,396	+		Sama_3430	0.35	-1.2
4,060,436	+		Sama_3430	0.40	-1.9
4,060,437	-		Sama_3430	0.40	-2.2
4,060,493	+		Sama_3430	0.46	-2.5
4,060,493	+		Sama_3430	0.46	+0.0
4,060,493	+		Sama_3430	0.46	-1.2
4,060,493	+		Sama_3430	0.46	-2.2
4,060,494	-		Sama_3430	0.46	+0.4
4,060,494	-		Sama_3430	0.46	-1.7
4,060,494	-		Sama_3430	0.46	-2.2
4,060,494	-		Sama_3430	0.46	-1.6
4,060,494	-		Sama_3430	0.46	-1.7
4,060,494	-		Sama_3430	0.46	-1.2
4,060,494	-		Sama_3430	0.46	-0.7
4,060,494	-		Sama_3430	0.46	+0.0
4,060,552	+		Sama_3430	0.53	-0.7
4,060,553	-		Sama_3430	0.53	-1.7
4,060,603	-		Sama_3430	0.59	-1.3
4,060,726	-		Sama_3430	0.73	-0.4
4,060,824	+		Sama_3430	0.84	-0.4
4,060,839	+		Sama_3430	0.86	-2.4
4,060,839	+		Sama_3430	0.86	-1.2
4,060,840	-		Sama_3430	0.86	+0.3
4,060,876	+				-0.6
4,060,877	-				-2.6
4,060,941	-				-0.1
4,060,960	-				-1.1
4,060,991	+				-2.7
4,060,992	-				-2.9
4,061,011	+				-0.3
4,061,012	-				-3.0
4,061,074	+				-2.5
4,061,074	+				-0.0
4,061,074	+				-0.0
4,061,074	+				-1.5
4,061,075	-				-1.3
4,061,075	-				+0.9
4,061,075	-				-1.0
4,061,075	-				-0.6
4,061,084	+				-0.6
4,061,084	+				-0.6
4,061,106	+				-1.9
4,061,107	-				+2.7
4,061,186	+		Sama_3431	0.21	-1.2
4,061,186	+		Sama_3431	0.21	+0.1
4,061,186	+		Sama_3431	0.21	-0.8
4,061,186	+		Sama_3431	0.21	+1.3
4,061,186	+		Sama_3431	0.21	-2.4
4,061,186	+		Sama_3431	0.21	-0.2
4,061,186	+		Sama_3431	0.21	-0.7
4,061,186	+		Sama_3431	0.21	-1.6
4,061,186	+		Sama_3431	0.21	+0.2
4,061,187	-		Sama_3431	0.21	-1.2
4,061,187	-		Sama_3431	0.21	-1.3
4,061,187	-		Sama_3431	0.21	-0.6
4,061,187	-		Sama_3431	0.21	+2.3
4,061,187	-		Sama_3431	0.21	+0.5
4,061,187	-		Sama_3431	0.21	+0.1
4,061,187	-		Sama_3431	0.21	-0.7
4,061,373	+		Sama_3431	0.59	-1.4
4,061,374	-		Sama_3431	0.59	+0.0
4,061,448	+		Sama_3431	0.74	-0.5
4,061,448	+		Sama_3431	0.74	+0.3
4,061,448	+		Sama_3431	0.74	+0.3
4,061,449	-		Sama_3431	0.74	+1.8
4,061,449	-		Sama_3431	0.74	-0.2
4,061,449	-		Sama_3431	0.74	+0.5
4,061,563	+				-0.1
4,061,563	+				-0.5
4,061,564	-				-1.5
4,061,564	-				-0.5
4,061,564	-				-0.7
4,061,574	+				+0.0
4,061,574	+				-1.5
4,061,574	+				+0.1
4,061,574	+				-1.6
4,061,574	+				+0.5
4,061,574	+				-0.9
4,061,574	+				+0.3
4,061,574	+				-3.8
4,061,574	+				-1.0
4,061,574	+				-0.5
4,061,574	+				-1.6
4,061,574	+				-1.1
4,061,575	-				+0.5
4,061,575	-				-1.3
4,061,575	-				-1.9
4,061,575	-				-1.0
4,061,575	-				-0.0
4,061,575	-				-1.4
4,061,575	-				+0.3
4,061,575	-				+0.5
4,061,575	-				-0.6
4,061,575	-				-0.2
4,061,575	-				-1.0
4,061,575	-				-1.3
4,061,575	-				-1.7
4,061,576	+				+2.4
4,061,576	+				+1.2
4,061,576	+				+0.3
4,061,576	+				-0.2
4,061,576	+				-0.4
4,061,576	+				-1.3
4,061,576	+				+0.8
4,061,576	+				-1.2
4,061,576	+				-0.3
4,061,576	+				-0.4
4,061,577	-				+0.1
4,061,577	-				-1.2
4,061,577	-				-1.9
4,061,577	-				+0.4
4,061,577	-				-3.4
4,061,577	-				+0.4
4,061,577	-				-1.2
4,061,627	+				-0.9
4,061,627	+				-0.1
4,061,627	+				-0.7
4,061,627	+				-0.9
4,061,628	-				-2.1
4,061,628	-				-0.5
4,061,628	-				-1.3
4,061,628	-				-2.2
4,061,628	-				+0.4
4,061,628	-				-1.6
4,061,672	+				+1.7
4,061,672	+				-1.4
4,061,697	+				-0.1
4,061,697	+				+2.1
4,061,698	-				+0.6
4,061,698	-				+0.1
4,061,707	+				+0.8
4,061,707	+				+0.9
4,061,707	+				-1.0
4,061,707	+				-0.1
4,061,707	+				-1.2
4,061,707	+				-0.8
4,061,707	+				+2.4
4,061,707	+				-0.8
4,061,707	+				-0.5
4,061,707	+				+2.5
4,061,707	+				+0.5
4,061,707	+				-0.5
4,061,708	-				-0.2
4,061,708	-				-1.5
4,061,708	-				+0.8
4,061,708	-				+3.2
4,061,708	-				+0.8
4,061,708	-				+0.5
4,061,708	-				+0.6
4,061,708	-				+0.4
4,061,708	-				+1.6
4,061,708	-				+0.1
4,061,708	-				-0.5
4,061,715	+				-0.0
4,061,732	+				-1.1
4,061,732	+				+0.8
4,061,733	-				-0.9
4,061,733	-				+0.3
4,061,733	-				-2.6
4,061,743	-				-1.4
4,061,743	-				+1.0
4,061,743	-				-0.0
4,061,744	+				-0.7
4,061,745	-				+0.1
4,061,770	-				-0.4
4,061,770	-				+0.6
4,061,821	+				+1.8
4,061,821	+				-2.0
4,061,830	+				-0.1
4,061,831	-				+1.4
4,061,831	-				-1.5