Strain Fitness in Shewanella amazonensis SB2B around Sama_3220

Experiment: Anaero. fumarate (e.a.)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaero. fumarate (e.a.)
3,811,205	+				-2.0
3,811,206	-				-1.8
3,811,240	-				-0.6
3,811,240	-				-1.5
3,811,274	+				-0.6
3,811,275	-				-1.1
3,811,275	-				+1.3
3,811,278	+				-1.2
3,811,279	-				-0.9
3,811,285	+				-0.6
3,811,292	-				+0.2
3,811,308	+				-1.2
3,811,308	+				+0.5
3,811,308	+				-0.5
3,811,308	+				+1.2
3,811,308	+				+0.4
3,811,331	-				+1.2
3,811,345	-				-0.7
3,811,357	+				-1.7
3,811,358	-				+0.9
3,811,413	+				+0.1
3,811,413	+				-2.4
3,811,413	+				-1.8
3,811,414	-				-1.3
3,811,461	+	frdB	Sama_3219	0.13	-2.5
3,811,461	+	frdB	Sama_3219	0.13	-0.5
3,811,462	-	frdB	Sama_3219	0.14	-1.0
3,811,462	-	frdB	Sama_3219	0.14	-1.3
3,811,462	-	frdB	Sama_3219	0.14	-0.7
3,811,462	-	frdB	Sama_3219	0.14	-0.4
3,811,462	-	frdB	Sama_3219	0.14	-1.3
3,811,499	+	frdB	Sama_3219	0.19	-2.1
3,811,499	+	frdB	Sama_3219	0.19	-1.3
3,811,499	+	frdB	Sama_3219	0.19	-0.6
3,811,500	-	frdB	Sama_3219	0.19	-0.1
3,811,500	-	frdB	Sama_3219	0.19	-1.0
3,811,500	-	frdB	Sama_3219	0.19	-1.4
3,811,612	+	frdB	Sama_3219	0.34	+0.2
3,811,650	-	frdB	Sama_3219	0.39	-0.3
3,811,759	-	frdB	Sama_3219	0.54	-0.3
3,811,759	-	frdB	Sama_3219	0.54	-2.1
3,811,855	-	frdB	Sama_3219	0.67	-0.1
3,811,965	+	frdB	Sama_3219	0.83	-0.5
3,811,965	+	frdB	Sama_3219	0.83	+0.8
3,811,965	+	frdB	Sama_3219	0.83	+0.5
3,811,965	+	frdB	Sama_3219	0.83	-1.3
3,811,966	-	frdB	Sama_3219	0.83	-0.5
3,811,989	+	frdB	Sama_3219	0.86	-1.3
3,811,989	+	frdB	Sama_3219	0.86	-0.8
3,811,990	-	frdB	Sama_3219	0.86	+0.3
3,811,990	-	frdB	Sama_3219	0.86	-2.3
3,811,990	-	frdB	Sama_3219	0.86	-2.2
3,811,990	-	frdB	Sama_3219	0.86	+0.5
3,812,012	+	frdB	Sama_3219	0.89	-1.5
3,812,012	+	frdB	Sama_3219	0.89	-0.9
3,812,012	+	frdB	Sama_3219	0.89	-1.9
3,812,012	+	frdB	Sama_3219	0.89	-2.3
3,812,012	+	frdB	Sama_3219	0.89	-0.7
3,812,012	+	frdB	Sama_3219	0.89	-1.1
3,812,013	-	frdB	Sama_3219	0.89	-0.4
3,812,013	-	frdB	Sama_3219	0.89	-1.4
3,812,013	-	frdB	Sama_3219	0.89	-0.6
3,812,013	-	frdB	Sama_3219	0.89	-2.9
3,812,013	-	frdB	Sama_3219	0.89	-2.1
3,812,032	-				-1.6
3,812,064	+				+0.5
3,812,064	+				-0.8
3,812,096	+				-0.6
3,812,120	+				+0.9
3,812,120	+				+1.0
3,812,120	+				-2.6
3,812,120	+				-2.6
3,812,120	+				-1.4
3,812,206	-				-1.7
3,812,335	+		Sama_3220	0.12	-1.5
3,812,344	+		Sama_3220	0.13	-0.5
3,812,355	+		Sama_3220	0.13	+0.4
3,812,356	-		Sama_3220	0.13	+0.2
3,812,356	-		Sama_3220	0.13	-0.8
3,812,370	+		Sama_3220	0.14	-2.4
3,812,370	+		Sama_3220	0.14	-0.4
3,812,370	+		Sama_3220	0.14	-2.2
3,812,370	+		Sama_3220	0.14	-2.7
3,812,370	+		Sama_3220	0.14	-1.9
3,812,370	+		Sama_3220	0.14	-0.8
3,812,370	+		Sama_3220	0.14	-1.5
3,812,370	+		Sama_3220	0.14	-1.1
3,812,371	-		Sama_3220	0.14	+0.7
3,812,371	-		Sama_3220	0.14	-0.8
3,812,371	-		Sama_3220	0.14	-1.3
3,812,371	-		Sama_3220	0.14	-0.5
3,812,371	-		Sama_3220	0.14	-0.8
3,812,371	-		Sama_3220	0.14	-1.4
3,812,371	-		Sama_3220	0.14	-0.2
3,812,371	-		Sama_3220	0.14	-1.2
3,812,386	+		Sama_3220	0.15	-0.4
3,812,387	-		Sama_3220	0.15	+0.2
3,812,387	-		Sama_3220	0.15	+0.4
3,812,571	+		Sama_3220	0.24	-0.8
3,812,571	+		Sama_3220	0.24	-1.9
3,812,572	-		Sama_3220	0.24	-1.4
3,812,572	-		Sama_3220	0.24	+0.0
3,812,572	-		Sama_3220	0.24	+0.3
3,812,618	+		Sama_3220	0.26	-0.8
3,812,618	+		Sama_3220	0.26	-1.4
3,812,619	-		Sama_3220	0.26	-0.7
3,812,619	-		Sama_3220	0.26	-1.9
3,812,642	+		Sama_3220	0.27	-2.6
3,812,643	-		Sama_3220	0.27	-1.2
3,812,643	-		Sama_3220	0.27	-1.7
3,812,653	-		Sama_3220	0.28	-0.4
3,812,653	-		Sama_3220	0.28	-0.3
3,812,653	-		Sama_3220	0.28	-2.4
3,812,695	+		Sama_3220	0.30	-1.9
3,812,695	+		Sama_3220	0.30	-1.3
3,812,695	+		Sama_3220	0.30	+0.1
3,812,695	+		Sama_3220	0.30	-0.2
3,812,695	+		Sama_3220	0.30	-1.0
3,812,695	+		Sama_3220	0.30	-0.0
3,812,695	+		Sama_3220	0.30	-0.2
3,812,695	+		Sama_3220	0.30	-0.8
3,812,695	+		Sama_3220	0.30	+0.1
3,812,696	-		Sama_3220	0.30	-0.4
3,812,696	-		Sama_3220	0.30	-0.2
3,812,696	-		Sama_3220	0.30	-2.0
3,812,797	+		Sama_3220	0.35	-2.2
3,812,797	+		Sama_3220	0.35	-1.0
3,812,797	+		Sama_3220	0.35	-0.3
3,812,798	-		Sama_3220	0.35	+0.8
3,812,798	-		Sama_3220	0.35	-0.5
3,812,798	-		Sama_3220	0.35	+1.1
3,812,798	-		Sama_3220	0.35	-1.7
3,812,854	-		Sama_3220	0.38	-1.5
3,812,857	+		Sama_3220	0.38	-0.7
3,812,857	+		Sama_3220	0.38	-1.1
3,812,857	+		Sama_3220	0.38	-0.4
3,812,857	+		Sama_3220	0.38	-0.8
3,812,857	+		Sama_3220	0.38	-0.4
3,812,857	+		Sama_3220	0.38	-1.0
3,812,857	+		Sama_3220	0.38	-1.8
3,812,857	+		Sama_3220	0.38	-0.9
3,812,857	+		Sama_3220	0.38	-1.2
3,812,857	+		Sama_3220	0.38	-0.2
3,812,857	+		Sama_3220	0.38	-2.5
3,812,858	-		Sama_3220	0.38	-0.1
3,812,858	-		Sama_3220	0.38	-0.9
3,812,858	-		Sama_3220	0.38	-0.9
3,812,858	-		Sama_3220	0.38	-2.6
3,812,858	-		Sama_3220	0.38	-2.5
3,812,858	-		Sama_3220	0.38	-2.1
3,812,904	-		Sama_3220	0.40	-2.4
3,812,919	-		Sama_3220	0.41	+0.8
3,813,019	+		Sama_3220	0.46	-0.6
3,813,020	-		Sama_3220	0.46	+0.4
3,813,020	-		Sama_3220	0.46	-1.0
3,813,020	-		Sama_3220	0.46	-0.2
3,813,020	-		Sama_3220	0.46	-2.3
3,813,020	-		Sama_3220	0.46	-1.4
3,813,020	-		Sama_3220	0.46	-1.9
3,813,114	+		Sama_3220	0.50	-1.4
3,813,114	+		Sama_3220	0.50	-2.0
3,813,114	+		Sama_3220	0.50	-0.8
3,813,114	+		Sama_3220	0.50	-0.9
3,813,115	-		Sama_3220	0.50	-0.7
3,813,141	-		Sama_3220	0.52	-1.2
3,813,164	-		Sama_3220	0.53	-0.2
3,813,194	+		Sama_3220	0.54	+0.9
3,813,194	+		Sama_3220	0.54	-2.3
3,813,194	+		Sama_3220	0.54	+0.2
3,813,194	+		Sama_3220	0.54	-2.2
3,813,194	+		Sama_3220	0.54	+1.7
3,813,194	+		Sama_3220	0.54	-2.1
3,813,194	+		Sama_3220	0.54	-0.0
3,813,194	+		Sama_3220	0.54	+0.4
3,813,195	-		Sama_3220	0.54	-0.3
3,813,195	-		Sama_3220	0.54	-2.9
3,813,195	-		Sama_3220	0.54	+1.7
3,813,195	-		Sama_3220	0.54	-1.2
3,813,195	-		Sama_3220	0.54	+1.5
3,813,256	+		Sama_3220	0.57	+0.1
3,813,256	+		Sama_3220	0.57	-0.5
3,813,256	+		Sama_3220	0.57	-1.5
3,813,256	+		Sama_3220	0.57	-1.6
3,813,256	+		Sama_3220	0.57	-0.0
3,813,257	-		Sama_3220	0.57	-0.5
3,813,257	-		Sama_3220	0.57	-0.4
3,813,266	+		Sama_3220	0.58	-1.6
3,813,267	-		Sama_3220	0.58	+1.4
3,813,424	-		Sama_3220	0.65	-1.0
3,813,424	-		Sama_3220	0.65	-1.2
3,813,460	+		Sama_3220	0.67	-0.3
3,813,461	-		Sama_3220	0.67	+1.3
3,813,464	+		Sama_3220	0.67	-0.8
3,813,464	+		Sama_3220	0.67	-1.1
3,813,464	+		Sama_3220	0.67	+1.0
3,813,465	-		Sama_3220	0.68	+2.0
3,813,465	-		Sama_3220	0.68	-0.5
3,813,486	+		Sama_3220	0.69	-0.3
3,813,508	+		Sama_3220	0.70	-1.6
3,813,508	+		Sama_3220	0.70	-2.0
3,813,508	+		Sama_3220	0.70	-1.5
3,813,530	+		Sama_3220	0.71	-2.2
3,813,530	+		Sama_3220	0.71	-1.7
3,813,531	-		Sama_3220	0.71	-2.5
3,813,547	-		Sama_3220	0.72	-1.1
3,813,575	+		Sama_3220	0.73	+1.8
3,813,576	-		Sama_3220	0.73	-0.3
3,813,592	-		Sama_3220	0.74	-0.9
3,813,633	-		Sama_3220	0.76	+0.2
3,813,643	+		Sama_3220	0.76	-0.4
3,813,643	+		Sama_3220	0.76	-1.5
3,813,643	+		Sama_3220	0.76	-1.5
3,813,643	+		Sama_3220	0.76	-0.7
3,813,644	-		Sama_3220	0.76	-0.1
3,813,644	-		Sama_3220	0.76	-0.6
3,813,644	-		Sama_3220	0.76	-1.3
3,813,644	-		Sama_3220	0.76	+1.3
3,813,676	+		Sama_3220	0.78	-0.7
3,813,676	+		Sama_3220	0.78	-0.5
3,813,676	+		Sama_3220	0.78	-1.5
3,813,676	+		Sama_3220	0.78	-1.9
3,813,676	+		Sama_3220	0.78	+0.0
3,813,677	-		Sama_3220	0.78	-1.2
3,813,677	-		Sama_3220	0.78	+0.2
3,813,677	-		Sama_3220	0.78	-2.1
3,813,719	+		Sama_3220	0.80	-1.4
3,813,771	+		Sama_3220	0.82	-2.1
3,813,771	+		Sama_3220	0.82	-1.2
3,813,771	+		Sama_3220	0.82	-0.8
3,813,772	-		Sama_3220	0.83	+1.8
3,813,772	-		Sama_3220	0.83	+1.3
3,813,772	-		Sama_3220	0.83	-0.2
3,813,772	-		Sama_3220	0.83	-1.2
3,813,772	-		Sama_3220	0.83	-0.6
3,813,906	+		Sama_3220	0.89	-1.7
3,813,907	-		Sama_3220	0.89	-0.7
3,813,907	-		Sama_3220	0.89	-0.9
3,813,956	+				-1.4
3,813,978	-				-0.9
3,814,026	+				-2.0
3,814,026	+				-1.0
3,814,026	+				-1.8
3,814,036	+				+0.5
3,814,038	-				-2.8
3,814,112	+				+0.0
3,814,112	+				-0.2
3,814,113	-				-0.8
3,814,113	-				-3.2
3,814,114	+				-2.8
3,814,114	+				+0.3
3,814,115	-				-0.8
3,814,115	-				-1.7
3,814,115	-				-1.9
3,814,115	-				+0.9
3,814,156	+				+0.8
3,814,156	+				-1.0
3,814,157	-				-1.5
3,814,157	-				+0.8
3,814,157	-				-1.9
3,814,157	-				+1.8
3,814,157	-				-0.9
3,814,163	+				-0.2
3,814,163	+				-1.8
3,814,164	-				+2.8
3,814,164	-				+2.2
3,814,209	+				-0.0
3,814,209	+				-0.3
3,814,209	+				-1.7
3,814,210	-				+0.5
3,814,219	+				+0.4
3,814,220	-				-0.1
3,814,228	+				+0.5
3,814,228	+				-2.0
3,814,253	+				-1.3
3,814,253	+				-0.1
3,814,253	+				+0.1
3,814,253	+				+0.8
3,814,253	+				+0.2
3,814,254	-				+1.8
3,814,254	-				+0.1
3,814,295	+		Sama_3221	0.13	-0.9
3,814,295	+		Sama_3221	0.13	+0.7
3,814,295	+		Sama_3221	0.13	+1.6
3,814,295	+		Sama_3221	0.13	-2.2
3,814,296	-		Sama_3221	0.13	+1.5
3,814,398	+		Sama_3221	0.28	-0.2
3,814,399	-		Sama_3221	0.28	+0.8
3,814,399	-		Sama_3221	0.28	+0.1
3,814,407	+		Sama_3221	0.29	-1.4
3,814,407	+		Sama_3221	0.29	+0.8
3,814,408	-		Sama_3221	0.30	+1.8
3,814,413	+		Sama_3221	0.30	-1.2
3,814,413	+		Sama_3221	0.30	+0.0
3,814,414	-		Sama_3221	0.31	+0.1
3,814,414	-		Sama_3221	0.31	-1.4
3,814,451	+		Sama_3221	0.36	+0.9
3,814,451	+		Sama_3221	0.36	-0.4
3,814,451	+		Sama_3221	0.36	-2.3
3,814,452	-		Sama_3221	0.36	+0.7
3,814,452	-		Sama_3221	0.36	+1.4
3,814,452	-		Sama_3221	0.36	-1.0
3,814,452	-		Sama_3221	0.36	+0.3
3,814,452	-		Sama_3221	0.36	-0.7
3,814,502	+		Sama_3221	0.44	-1.4
3,814,502	+		Sama_3221	0.44	-1.1
3,814,502	+		Sama_3221	0.44	+1.4
3,814,502	+		Sama_3221	0.44	+0.8
3,814,502	+		Sama_3221	0.44	-0.9
3,814,502	+		Sama_3221	0.44	-1.0
3,814,502	+		Sama_3221	0.44	-0.7
3,814,502	+		Sama_3221	0.44	-0.6
3,814,502	+		Sama_3221	0.44	-1.5
3,814,502	+		Sama_3221	0.44	-0.1
3,814,503	-		Sama_3221	0.44	+0.9
3,814,503	-		Sama_3221	0.44	+1.0
3,814,503	-		Sama_3221	0.44	-1.5
3,814,546	+		Sama_3221	0.50	-1.2
3,814,547	-		Sama_3221	0.50	-0.0
3,814,615	+		Sama_3221	0.60	+0.3
3,814,615	+		Sama_3221	0.60	-0.5
3,814,615	+		Sama_3221	0.60	-1.6
3,814,615	+		Sama_3221	0.60	-0.4
3,814,616	-		Sama_3221	0.60	+1.3
3,814,616	-		Sama_3221	0.60	-1.4
3,814,616	-		Sama_3221	0.60	+0.4
3,814,616	-		Sama_3221	0.60	+1.0
3,814,616	-		Sama_3221	0.60	-1.1
3,814,616	-		Sama_3221	0.60	-0.6
3,814,616	-		Sama_3221	0.60	-0.5
3,814,661	+		Sama_3221	0.67	+0.4
3,814,661	+		Sama_3221	0.67	-1.6
3,814,661	+		Sama_3221	0.67	-0.7
3,814,661	+		Sama_3221	0.67	-0.3
3,814,661	+		Sama_3221	0.67	+0.2
3,814,661	+		Sama_3221	0.67	-0.6
3,814,661	+		Sama_3221	0.67	-1.4
3,814,661	+		Sama_3221	0.67	-1.7
3,814,661	+		Sama_3221	0.67	+1.8
3,814,661	+		Sama_3221	0.67	-1.1
3,814,661	+		Sama_3221	0.67	-0.5
3,814,661	+		Sama_3221	0.67	-0.4
3,814,661	+		Sama_3221	0.67	+0.6
3,814,661	+		Sama_3221	0.67	-2.3
3,814,662	-		Sama_3221	0.67	+1.8
3,814,662	-		Sama_3221	0.67	+1.2
3,814,662	-		Sama_3221	0.67	+1.0
3,814,662	-		Sama_3221	0.67	+1.2
3,814,662	-		Sama_3221	0.67	-0.7
3,814,662	-		Sama_3221	0.67	+0.5
3,814,662	-		Sama_3221	0.67	-0.6
3,814,662	-		Sama_3221	0.67	+0.5
3,814,662	-		Sama_3221	0.67	-1.0
3,814,662	-		Sama_3221	0.67	+1.2
3,814,662	-		Sama_3221	0.67	+0.2
3,814,662	-		Sama_3221	0.67	-1.4
3,814,662	-		Sama_3221	0.67	+0.5
3,814,662	-		Sama_3221	0.67	+0.0
3,814,668	-		Sama_3221	0.68	-1.9
3,814,709	+		Sama_3221	0.74	-0.2
3,814,709	+		Sama_3221	0.74	-1.9
3,814,726	+		Sama_3221	0.77	-0.7
3,814,726	+		Sama_3221	0.77	-0.3
3,814,726	+		Sama_3221	0.77	-0.2
3,814,727	-		Sama_3221	0.77	+0.8
3,814,812	-		Sama_3221	0.89	-1.4
3,814,862	+				+2.1
3,814,862	+				-1.3
3,814,862	+				-1.8
3,814,863	-				-0.9
3,814,863	-				+0.2
3,814,863	-				-0.8
3,814,863	-				+0.0
3,814,863	-				-0.2
3,814,863	-				+0.5
3,814,863	-				+1.1
3,814,903	+				-1.7
3,814,903	+				-0.6
3,814,950	+				-2.9
3,814,950	+				-1.6
3,814,950	+				+0.2
3,814,951	-				-0.2
3,814,982	+				-0.5
3,814,994	+				-1.9
3,815,021	+				-0.1
3,815,022	-				+0.4
3,815,022	-				-2.2
3,815,089	-				-2.6
3,815,103	+				-1.5
3,815,103	+				-1.4
3,815,103	+				-2.6
3,815,103	+				-0.8
3,815,103	+				-0.9
3,815,103	+				-0.3
3,815,103	+				-0.8
3,815,103	+				-3.3
3,815,103	+				+0.7
3,815,103	+				-0.6
3,815,103	+				-1.4
3,815,103	+				-1.9
3,815,103	+				-0.7
3,815,103	+				+0.3
3,815,103	+				-1.2
3,815,103	+				-0.8
3,815,103	+				+0.5
3,815,103	+				-0.2
3,815,103	+				-1.0
3,815,103	+				-2.9
3,815,103	+				-1.9
3,815,103	+				-1.7
3,815,103	+				-1.1
3,815,103	+				-0.7
3,815,103	+				-2.2
3,815,103	+				+1.0
3,815,103	+				-3.3
3,815,104	-				-3.0
3,815,104	-				-2.0
3,815,104	-				-1.0
3,815,104	-				-1.0
3,815,104	-				-3.0
3,815,104	-				-2.3
3,815,104	-				-0.7
3,815,104	-				-3.5
3,815,104	-				-1.4
3,815,104	-				-2.0
3,815,104	-				-2.3
3,815,104	-				-1.0
3,815,104	-				-3.1
3,815,104	-				-0.9
3,815,104	-				-1.9
3,815,104	-				-1.5
3,815,104	-				-0.2
3,815,104	-				-1.8
3,815,104	-				-0.4
3,815,104	-				-1.4
3,815,104	-				-1.1
3,815,104	-				-0.5
3,815,104	-				-0.5
3,815,105	+				-2.1
3,815,105	+				-1.2
3,815,105	+				+0.5
3,815,105	+				-1.9
3,815,105	+				+0.6
3,815,105	+				-1.0
3,815,105	+				-0.6
3,815,105	+				+0.6
3,815,105	+				-3.0
3,815,105	+				-1.0
3,815,105	+				-2.5
3,815,105	+				+1.2
3,815,105	+				-1.0
3,815,105	+				-2.5
3,815,105	+				-1.0
3,815,105	+				-0.8
3,815,105	+				-0.2
3,815,105	+				-1.1
3,815,105	+				+0.3
3,815,106	-				-3.5
3,815,106	-				-1.5
3,815,106	-				-1.7
3,815,106	-				-1.8
3,815,106	-				-0.2
3,815,106	-				-1.5
3,815,106	-				+0.4
3,815,106	-				-0.5
3,815,106	-				-0.7
3,815,106	-				+2.7
3,815,106	-				-0.3
3,815,106	-				+0.2
3,815,106	-				-2.2
3,815,106	-				+0.5