Strain Fitness in Shewanella amazonensis SB2B around Sama_2682

Experiment: Anaero. fumarate (e.a.)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaero. fumarate (e.a.)
3,211,126	+		Sama_2681	0.33	-0.1
3,211,126	+		Sama_2681	0.33	+0.8
3,211,126	+		Sama_2681	0.33	-0.8
3,211,127	-		Sama_2681	0.33	-1.8
3,211,279	-		Sama_2681	0.46	+0.8
3,211,279	-		Sama_2681	0.46	-1.3
3,211,288	+		Sama_2681	0.47	-0.5
3,211,288	+		Sama_2681	0.47	-0.0
3,211,289	-		Sama_2681	0.47	+0.2
3,211,289	-		Sama_2681	0.47	+0.5
3,211,289	-		Sama_2681	0.47	+2.1
3,211,328	+		Sama_2681	0.50	-0.3
3,211,358	+		Sama_2681	0.53	+1.3
3,211,358	+		Sama_2681	0.53	+0.2
3,211,358	+		Sama_2681	0.53	+0.4
3,211,359	-		Sama_2681	0.53	-0.6
3,211,406	-		Sama_2681	0.57	-1.3
3,211,418	-		Sama_2681	0.58	-3.0
3,211,418	-		Sama_2681	0.58	-0.1
3,211,418	-		Sama_2681	0.58	+0.5
3,211,418	-		Sama_2681	0.58	+1.5
3,211,418	-		Sama_2681	0.58	+0.4
3,211,418	-		Sama_2681	0.58	+1.0
3,211,420	+		Sama_2681	0.58	+0.5
3,211,420	+		Sama_2681	0.58	+2.2
3,211,420	+		Sama_2681	0.58	+0.9
3,211,420	+		Sama_2681	0.58	-2.7
3,211,420	+		Sama_2681	0.58	-1.0
3,211,420	+		Sama_2681	0.58	-0.5
3,211,420	+		Sama_2681	0.58	-0.2
3,211,421	-		Sama_2681	0.58	+0.3
3,211,421	-		Sama_2681	0.58	+0.5
3,211,421	-		Sama_2681	0.58	+0.7
3,211,441	+		Sama_2681	0.60	-0.3
3,211,441	+		Sama_2681	0.60	+0.1
3,211,441	+		Sama_2681	0.60	-2.2
3,211,441	+		Sama_2681	0.60	+1.7
3,211,441	+		Sama_2681	0.60	+1.3
3,211,441	+		Sama_2681	0.60	+0.7
3,211,441	+		Sama_2681	0.60	-0.5
3,211,441	+		Sama_2681	0.60	+0.4
3,211,441	+		Sama_2681	0.60	-0.9
3,211,441	+		Sama_2681	0.60	+2.0
3,211,441	+		Sama_2681	0.60	+0.3
3,211,441	+		Sama_2681	0.60	-0.6
3,211,441	+		Sama_2681	0.60	+2.4
3,211,442	-		Sama_2681	0.60	-1.0
3,211,442	-		Sama_2681	0.60	-1.5
3,211,442	-		Sama_2681	0.60	-0.8
3,211,442	-		Sama_2681	0.60	+1.5
3,211,442	-		Sama_2681	0.60	+0.9
3,211,442	-		Sama_2681	0.60	+0.5
3,211,442	-		Sama_2681	0.60	-1.3
3,211,442	-		Sama_2681	0.60	+0.7
3,211,468	+		Sama_2681	0.62	+1.5
3,211,468	+		Sama_2681	0.62	-0.3
3,211,468	+		Sama_2681	0.62	+0.9
3,211,468	+		Sama_2681	0.62	+0.2
3,211,468	+		Sama_2681	0.62	-0.8
3,211,468	+		Sama_2681	0.62	-1.2
3,211,469	-		Sama_2681	0.62	-0.8
3,211,469	-		Sama_2681	0.62	-0.6
3,211,469	-		Sama_2681	0.62	+0.5
3,211,469	-		Sama_2681	0.62	-1.0
3,211,469	-		Sama_2681	0.62	-1.4
3,211,469	-		Sama_2681	0.62	+1.0
3,211,477	+		Sama_2681	0.63	+1.9
3,211,477	+		Sama_2681	0.63	-0.9
3,211,478	-		Sama_2681	0.63	+0.3
3,211,478	-		Sama_2681	0.63	+0.1
3,211,544	+		Sama_2681	0.68	+0.8
3,211,545	-		Sama_2681	0.68	+0.1
3,211,545	-		Sama_2681	0.68	-1.6
3,211,545	-		Sama_2681	0.68	+1.4
3,211,545	-		Sama_2681	0.68	+1.6
3,211,545	-		Sama_2681	0.68	-3.0
3,211,545	-		Sama_2681	0.68	-1.0
3,211,545	-		Sama_2681	0.68	-0.2
3,211,563	-		Sama_2681	0.70	-0.7
3,211,678	+		Sama_2681	0.80	-1.0
3,211,678	+		Sama_2681	0.80	+2.9
3,211,678	+		Sama_2681	0.80	-0.5
3,211,678	+		Sama_2681	0.80	+0.1
3,211,678	+		Sama_2681	0.80	+0.1
3,211,678	+		Sama_2681	0.80	-2.0
3,211,678	+		Sama_2681	0.80	-0.4
3,211,678	+		Sama_2681	0.80	+0.2
3,211,678	+		Sama_2681	0.80	-1.5
3,211,678	+		Sama_2681	0.80	-0.1
3,211,679	-		Sama_2681	0.80	-0.3
3,211,679	-		Sama_2681	0.80	+1.2
3,211,679	-		Sama_2681	0.80	-0.1
3,211,679	-		Sama_2681	0.80	-0.9
3,211,679	-		Sama_2681	0.80	-0.8
3,211,679	-		Sama_2681	0.80	-0.0
3,211,679	-		Sama_2681	0.80	+0.1
3,211,679	-		Sama_2681	0.80	-0.0
3,211,679	-		Sama_2681	0.80	-1.0
3,211,679	-		Sama_2681	0.80	-1.0
3,211,679	-		Sama_2681	0.80	-0.1
3,211,768	+		Sama_2681	0.87	-0.7
3,211,768	+		Sama_2681	0.87	+1.5
3,211,768	+		Sama_2681	0.87	+1.3
3,211,769	-		Sama_2681	0.87	-1.2
3,211,769	-		Sama_2681	0.87	-0.2
3,211,798	+		Sama_2681	0.90	-0.2
3,211,798	+		Sama_2681	0.90	-0.9
3,211,799	-				-0.3
3,211,799	-				+0.5
3,211,886	+				-0.0
3,211,886	+				+1.5
3,211,887	-				+0.1
3,211,887	-				-0.0
3,211,887	-				-0.7
3,211,915	+				+0.1
3,211,915	+				-1.7
3,211,989	+				+2.1
3,211,989	+				-1.3
3,211,989	+				-1.4
3,211,990	-				-2.8
3,211,990	-				+1.9
3,212,013	+				+0.5
3,212,013	+				-0.1
3,212,014	-				-1.5
3,212,014	-				-0.8
3,212,087	+				-0.5
3,212,087	+				-0.9
3,212,088	-				+0.3
3,212,088	-				-0.5
3,212,133	-				+1.8
3,212,199	+		Sama_2682	0.12	+0.0
3,212,199	+		Sama_2682	0.12	-1.0
3,212,244	+		Sama_2682	0.17	+1.1
3,212,309	+		Sama_2682	0.24	-0.9
3,212,310	-		Sama_2682	0.24	-1.9
3,212,310	-		Sama_2682	0.24	+0.5
3,212,315	-		Sama_2682	0.25	-1.5
3,212,322	+		Sama_2682	0.25	-1.3
3,212,356	+		Sama_2682	0.29	-1.4
3,212,356	+		Sama_2682	0.29	-0.6
3,212,356	+		Sama_2682	0.29	-1.8
3,212,356	+		Sama_2682	0.29	+0.2
3,212,356	+		Sama_2682	0.29	+0.6
3,212,356	+		Sama_2682	0.29	+2.4
3,212,357	-		Sama_2682	0.29	-1.5
3,212,357	-		Sama_2682	0.29	-1.3
3,212,357	-		Sama_2682	0.29	-0.9
3,212,357	-		Sama_2682	0.29	-2.2
3,212,357	-		Sama_2682	0.29	-0.8
3,212,417	+		Sama_2682	0.36	+3.1
3,212,417	+		Sama_2682	0.36	+0.5
3,212,418	-		Sama_2682	0.36	+0.1
3,212,418	-		Sama_2682	0.36	-0.8
3,212,427	-		Sama_2682	0.37	-0.8
3,212,427	-		Sama_2682	0.37	-1.9
3,212,427	-		Sama_2682	0.37	-2.5
3,212,427	-		Sama_2682	0.37	+1.5
3,212,427	-		Sama_2682	0.37	+0.0
3,212,427	-		Sama_2682	0.37	-1.7
3,212,427	-		Sama_2682	0.37	-1.1
3,212,427	-		Sama_2682	0.37	+1.3
3,212,428	+		Sama_2682	0.37	-1.0
3,212,429	-		Sama_2682	0.37	+1.9
3,212,429	-		Sama_2682	0.37	-0.5
3,212,429	-		Sama_2682	0.37	+0.0
3,212,429	-		Sama_2682	0.37	-1.4
3,212,490	+		Sama_2682	0.44	+1.1
3,212,490	+		Sama_2682	0.44	-1.2
3,212,491	-		Sama_2682	0.44	-2.0
3,212,491	-		Sama_2682	0.44	+1.4
3,212,491	-		Sama_2682	0.44	-2.4
3,212,491	-		Sama_2682	0.44	+2.1
3,212,623	-		Sama_2682	0.58	-0.8
3,212,623	-		Sama_2682	0.58	-1.9
3,212,623	-		Sama_2682	0.58	-0.6
3,212,703	-		Sama_2682	0.67	-1.3
3,212,768	+		Sama_2682	0.74	-1.5
3,212,768	+		Sama_2682	0.74	+0.9
3,212,769	-		Sama_2682	0.74	+1.0
3,212,800	+		Sama_2682	0.78	-0.8
3,212,801	-		Sama_2682	0.78	+2.0
3,212,830	-		Sama_2682	0.81	-0.9
3,212,830	-		Sama_2682	0.81	-0.9
3,212,848	-		Sama_2682	0.83	-1.6
3,212,887	+		Sama_2682	0.87	-0.6
3,212,887	+		Sama_2682	0.87	+0.9
3,212,887	+		Sama_2682	0.87	+0.3
3,212,888	-		Sama_2682	0.87	-0.0
3,212,888	-		Sama_2682	0.87	+1.3
3,212,950	-				-2.5
3,212,974	+				-2.2
3,213,019	+				+1.3
3,213,072	+				+0.3
3,213,073	-				-1.8
3,213,228	-		Sama_2683	0.32	-0.8
3,213,321	+		Sama_2683	0.46	+2.7
3,213,321	+		Sama_2683	0.46	-0.5
3,213,321	+		Sama_2683	0.46	-1.0
3,213,370	+		Sama_2683	0.53	+0.7
3,213,370	+		Sama_2683	0.53	+0.8
3,213,371	-		Sama_2683	0.53	-0.5
3,213,371	-		Sama_2683	0.53	+0.1
3,213,371	-		Sama_2683	0.53	+1.5
3,213,371	-		Sama_2683	0.53	-0.8
3,213,375	-		Sama_2683	0.54	-1.2
3,213,375	-		Sama_2683	0.54	-0.0
3,213,375	-		Sama_2683	0.54	-0.2
3,213,384	-		Sama_2683	0.55	+1.5
3,213,438	+		Sama_2683	0.63	-2.4
3,213,439	-		Sama_2683	0.63	-1.6
3,213,449	+		Sama_2683	0.65	-0.5
3,213,449	+		Sama_2683	0.65	+1.1
3,213,449	+		Sama_2683	0.65	+0.8
3,213,449	+		Sama_2683	0.65	-0.7
3,213,450	-		Sama_2683	0.65	-0.8
3,213,450	-		Sama_2683	0.65	-1.7
3,213,450	-		Sama_2683	0.65	+4.7
3,213,450	-		Sama_2683	0.65	-2.0
3,213,450	-		Sama_2683	0.65	+0.8
3,213,450	-		Sama_2683	0.65	+1.3
3,213,450	-		Sama_2683	0.65	+1.0
3,213,450	-		Sama_2683	0.65	+1.4
3,213,450	-		Sama_2683	0.65	+1.0
3,213,450	-		Sama_2683	0.65	+0.4
3,213,462	-		Sama_2683	0.67	-0.2
3,213,482	-		Sama_2683	0.70	-0.2
3,213,482	-		Sama_2683	0.70	+0.2
3,213,548	+		Sama_2683	0.80	-0.7
3,213,548	+		Sama_2683	0.80	+0.7
3,213,549	-		Sama_2683	0.80	-1.7
3,213,609	-		Sama_2683	0.89	+1.6
3,213,609	-		Sama_2683	0.89	+0.2
3,213,609	-		Sama_2683	0.89	-1.0
3,213,616	+				-1.3
3,213,616	+				-1.0
3,213,616	+				-1.8
3,213,617	-				+2.4
3,213,617	-				+1.3
3,213,617	-				+1.2
3,213,644	-				-0.1
3,213,658	+				-0.8
3,213,658	+				-0.3
3,213,659	-				-2.9
3,213,661	+				+3.8
3,213,662	-				+0.8
3,213,662	-				-0.2
3,213,677	+				-0.8
3,213,703	+				-0.3
3,213,703	+				+0.9
3,213,703	+				-1.6
3,213,703	+				-2.1
3,213,704	-				-3.2
3,213,704	-				+0.3
3,213,704	-				+0.3
3,213,704	-				-0.7
3,213,778	+		Sama_2684	0.12	-0.2
3,213,863	+		Sama_2684	0.30	-0.0
3,213,863	+		Sama_2684	0.30	+2.1
3,213,863	+		Sama_2684	0.30	-2.0
3,213,863	+		Sama_2684	0.30	-1.1
3,213,863	+		Sama_2684	0.30	-1.3
3,213,863	+		Sama_2684	0.30	+1.5
3,213,863	+		Sama_2684	0.30	+0.3
3,213,863	+		Sama_2684	0.30	-1.9
3,213,863	+		Sama_2684	0.30	-1.3
3,213,864	-		Sama_2684	0.30	+0.3
3,213,864	-		Sama_2684	0.30	-2.9
3,213,864	-		Sama_2684	0.30	-0.0
3,213,864	-		Sama_2684	0.30	+1.2
3,213,887	+		Sama_2684	0.35	-0.6
3,213,949	+		Sama_2684	0.48	-0.3
3,213,949	+		Sama_2684	0.48	-0.8
3,213,950	-		Sama_2684	0.48	-0.6
3,213,950	-		Sama_2684	0.48	+0.2
3,213,950	-		Sama_2684	0.48	+0.0
3,213,950	-		Sama_2684	0.48	+0.4