Strain Fitness in Shewanella amazonensis SB2B around Sama_2556

Experiment: Anaero. fumarate (e.a.)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaero. fumarate (e.a.)
3,062,311	+		Sama_2554	0.26	+0.2
3,062,312	-		Sama_2554	0.27	-1.1
3,062,333	+		Sama_2554	0.30	-0.1
3,062,333	+		Sama_2554	0.30	+0.4
3,062,333	+		Sama_2554	0.30	+2.1
3,062,333	+		Sama_2554	0.30	+0.9
3,062,333	+		Sama_2554	0.30	-1.2
3,062,333	+		Sama_2554	0.30	-0.8
3,062,333	+		Sama_2554	0.30	+1.8
3,062,333	+		Sama_2554	0.30	+0.2
3,062,334	-		Sama_2554	0.30	-1.3
3,062,334	-		Sama_2554	0.30	+0.3
3,062,334	-		Sama_2554	0.30	-2.4
3,062,351	+		Sama_2554	0.33	-0.3
3,062,351	+		Sama_2554	0.33	-0.3
3,062,352	-		Sama_2554	0.33	-1.2
3,062,362	+		Sama_2554	0.35	-1.1
3,062,362	+		Sama_2554	0.35	+1.6
3,062,362	+		Sama_2554	0.35	+3.3
3,062,363	-		Sama_2554	0.35	-0.5
3,062,363	-		Sama_2554	0.35	-0.7
3,062,363	-		Sama_2554	0.35	-1.8
3,062,378	-		Sama_2554	0.38	+0.5
3,062,411	-		Sama_2554	0.43	-0.9
3,062,411	-		Sama_2554	0.43	-1.3
3,062,540	+		Sama_2554	0.65	+0.2
3,062,557	+		Sama_2554	0.68	-1.5
3,062,558	-		Sama_2554	0.68	-0.9
3,062,558	-		Sama_2554	0.68	-2.6
3,062,558	-		Sama_2554	0.68	+0.1
3,062,558	-		Sama_2554	0.68	+0.5
3,062,558	-		Sama_2554	0.68	+0.6
3,062,560	+		Sama_2554	0.69	-2.1
3,062,560	+		Sama_2554	0.69	-1.7
3,062,560	+		Sama_2554	0.69	+0.1
3,062,560	+		Sama_2554	0.69	-2.1
3,062,561	-		Sama_2554	0.69	-1.1
3,062,561	-		Sama_2554	0.69	-0.3
3,062,594	+		Sama_2554	0.74	-1.8
3,062,642	-		Sama_2554	0.83	+2.7
3,062,698	+				-0.4
3,062,741	+				+0.5
3,062,777	-				+2.8
3,062,778	+				+2.4
3,062,778	+				+1.5
3,062,778	+				-0.4
3,062,778	+				+0.1
3,062,778	+				-1.9
3,062,779	-				-0.8
3,062,779	-				+2.6
3,062,790	+				+0.1
3,062,790	+				-0.7
3,062,791	-				+0.5
3,062,791	-				+0.4
3,062,858	-		Sama_2555	0.15	-0.1
3,062,858	-		Sama_2555	0.15	-0.2
3,062,908	+		Sama_2555	0.30	-0.1
3,062,909	-		Sama_2555	0.31	-1.1
3,062,909	-		Sama_2555	0.31	-1.7
3,062,912	+		Sama_2555	0.31	-0.9
3,062,912	+		Sama_2555	0.31	+1.7
3,062,912	+		Sama_2555	0.31	-0.5
3,062,912	+		Sama_2555	0.31	+0.4
3,062,912	+		Sama_2555	0.31	+0.8
3,062,919	+		Sama_2555	0.34	+1.1
3,063,076	+		Sama_2555	0.82	-0.1
3,063,076	+		Sama_2555	0.82	-0.1
3,063,077	-		Sama_2555	0.82	-0.5
3,063,077	-		Sama_2555	0.82	+0.9
3,063,081	+		Sama_2555	0.83	-1.7
3,063,081	+		Sama_2555	0.83	-0.1
3,063,081	+		Sama_2555	0.83	+0.3
3,063,081	+		Sama_2555	0.83	-0.4
3,063,081	+		Sama_2555	0.83	-0.5
3,063,081	+		Sama_2555	0.83	+0.5
3,063,082	-		Sama_2555	0.83	+1.5
3,063,082	-		Sama_2555	0.83	+0.1
3,063,082	-		Sama_2555	0.83	-0.7
3,063,086	+		Sama_2555	0.85	-1.0
3,063,086	+		Sama_2555	0.85	+0.8
3,063,086	+		Sama_2555	0.85	-0.1
3,063,087	-		Sama_2555	0.85	+0.3
3,063,222	+				-1.5
3,063,223	-				+1.3
3,063,226	+				-1.0
3,063,226	+				+0.5
3,063,226	+				+1.1
3,063,226	+				-1.1
3,063,226	+				+0.7
3,063,227	-				+0.3
3,063,227	-				+1.5
3,063,227	-				+0.3
3,063,227	-				+0.3
3,063,227	-				+0.2
3,063,231	+				+0.3
3,063,232	-				+0.1
3,063,236	+				-2.9
3,063,236	+				-2.7
3,063,236	+				-1.5
3,063,237	-				-0.5
3,063,237	-				+2.1
3,063,268	+				-2.1
3,063,268	+				+2.8
3,063,269	-				-1.3
3,063,269	-				+1.3
3,063,269	-				-2.2
3,063,269	-				-1.7
3,063,269	-				+1.6
3,063,269	-				+1.1
3,063,272	+				-0.1
3,063,272	+				+0.6
3,063,273	-				+1.4
3,063,273	-				+0.0
3,063,314	+				+0.2
3,063,315	-				-0.9
3,063,368	+				+0.5
3,063,442	+		Sama_2556	0.13	-1.5
3,063,466	+		Sama_2556	0.14	+1.8
3,063,466	+		Sama_2556	0.14	-0.8
3,063,466	+		Sama_2556	0.14	-0.2
3,063,466	+		Sama_2556	0.14	-1.3
3,063,467	-		Sama_2556	0.14	-0.1
3,063,467	-		Sama_2556	0.14	-1.1
3,063,570	-		Sama_2556	0.22	+1.9
3,063,628	+		Sama_2556	0.26	+0.7
3,063,628	+		Sama_2556	0.26	+2.8
3,063,628	+		Sama_2556	0.26	-1.7
3,063,628	+		Sama_2556	0.26	+1.9
3,063,628	+		Sama_2556	0.26	+0.6
3,063,628	+		Sama_2556	0.26	+1.5
3,063,628	+		Sama_2556	0.26	-0.5
3,063,628	+		Sama_2556	0.26	+0.7
3,063,628	+		Sama_2556	0.26	+1.2
3,063,628	+		Sama_2556	0.26	+0.9
3,063,628	+		Sama_2556	0.26	-1.3
3,063,628	+		Sama_2556	0.26	+1.1
3,063,628	+		Sama_2556	0.26	+3.5
3,063,628	+		Sama_2556	0.26	+0.6
3,063,629	-		Sama_2556	0.26	+1.7
3,063,629	-		Sama_2556	0.26	+0.3
3,063,629	-		Sama_2556	0.26	+1.0
3,063,629	-		Sama_2556	0.26	+0.9
3,063,629	-		Sama_2556	0.26	+0.4
3,063,629	-		Sama_2556	0.26	+1.5
3,063,629	-		Sama_2556	0.26	+2.2
3,063,629	-		Sama_2556	0.26	+2.5
3,063,629	-		Sama_2556	0.26	-3.7
3,063,630	+		Sama_2556	0.26	+1.0
3,063,630	+		Sama_2556	0.26	-1.3
3,063,630	+		Sama_2556	0.26	-1.5
3,063,638	+		Sama_2556	0.27	+1.6
3,063,638	+		Sama_2556	0.27	-0.4
3,063,678	+		Sama_2556	0.29	-0.4
3,063,679	-		Sama_2556	0.30	+1.5
3,063,680	+		Sama_2556	0.30	-0.1
3,063,680	+		Sama_2556	0.30	+1.1
3,063,680	+		Sama_2556	0.30	+0.3
3,063,680	+		Sama_2556	0.30	+0.2
3,063,680	+		Sama_2556	0.30	+1.5
3,063,680	+		Sama_2556	0.30	+1.6
3,063,680	+		Sama_2556	0.30	+1.1
3,063,680	+		Sama_2556	0.30	+2.3
3,063,680	+		Sama_2556	0.30	+1.0
3,063,680	+		Sama_2556	0.30	+0.1
3,063,680	+		Sama_2556	0.30	+0.5
3,063,680	+		Sama_2556	0.30	-0.8
3,063,680	+		Sama_2556	0.30	+1.3
3,063,680	+		Sama_2556	0.30	+2.8
3,063,680	+		Sama_2556	0.30	+2.0
3,063,680	+		Sama_2556	0.30	+0.0
3,063,681	-		Sama_2556	0.30	+1.2
3,063,681	-		Sama_2556	0.30	+0.9
3,063,681	-		Sama_2556	0.30	+1.4
3,063,681	-		Sama_2556	0.30	-2.2
3,063,681	-		Sama_2556	0.30	+0.8
3,063,681	-		Sama_2556	0.30	-0.7
3,063,681	-		Sama_2556	0.30	-0.9
3,063,683	+		Sama_2556	0.30	-0.2
3,063,683	+		Sama_2556	0.30	+0.9
3,063,683	+		Sama_2556	0.30	-2.5
3,063,683	+		Sama_2556	0.30	+0.5
3,063,683	+		Sama_2556	0.30	-2.3
3,063,683	+		Sama_2556	0.30	+3.2
3,063,683	+		Sama_2556	0.30	+0.5
3,063,684	-		Sama_2556	0.30	+0.4
3,063,684	-		Sama_2556	0.30	+2.1
3,063,684	-		Sama_2556	0.30	-0.1
3,063,686	+		Sama_2556	0.30	+1.5
3,063,686	+		Sama_2556	0.30	+0.8
3,063,686	+		Sama_2556	0.30	+1.5
3,063,686	+		Sama_2556	0.30	+1.4
3,063,686	+		Sama_2556	0.30	-0.7
3,063,686	+		Sama_2556	0.30	+0.8
3,063,686	+		Sama_2556	0.30	+2.4
3,063,686	+		Sama_2556	0.30	-2.7
3,063,686	+		Sama_2556	0.30	+1.5
3,063,686	+		Sama_2556	0.30	+2.4
3,063,686	+		Sama_2556	0.30	+1.6
3,063,686	+		Sama_2556	0.30	+0.1
3,063,686	+		Sama_2556	0.30	-0.8
3,063,686	+		Sama_2556	0.30	+0.2
3,063,686	+		Sama_2556	0.30	+0.7
3,063,686	+		Sama_2556	0.30	-1.6
3,063,686	+		Sama_2556	0.30	+0.1
3,063,686	+		Sama_2556	0.30	+0.0
3,063,686	+		Sama_2556	0.30	+3.5
3,063,686	+		Sama_2556	0.30	+2.5
3,063,687	-		Sama_2556	0.30	-1.2
3,063,687	-		Sama_2556	0.30	+0.7
3,063,687	-		Sama_2556	0.30	+1.9
3,063,687	-		Sama_2556	0.30	+2.1
3,063,687	-		Sama_2556	0.30	+0.6
3,063,687	-		Sama_2556	0.30	-2.4
3,063,687	-		Sama_2556	0.30	+0.4
3,063,687	-		Sama_2556	0.30	+1.9
3,063,687	-		Sama_2556	0.30	-0.5
3,063,687	-		Sama_2556	0.30	+2.8
3,063,745	+		Sama_2556	0.34	+0.5
3,063,859	+		Sama_2556	0.42	-1.2
3,063,859	+		Sama_2556	0.42	-0.9
3,063,859	+		Sama_2556	0.42	-3.0
3,063,859	+		Sama_2556	0.42	+1.3
3,063,859	+		Sama_2556	0.42	+3.6
3,063,859	+		Sama_2556	0.42	-0.9
3,063,860	-		Sama_2556	0.42	+1.1
3,063,860	-		Sama_2556	0.42	-1.8
3,063,860	-		Sama_2556	0.42	-1.9
3,063,860	-		Sama_2556	0.42	+0.1
3,063,860	-		Sama_2556	0.42	-1.5
3,063,860	-		Sama_2556	0.42	-0.5
3,063,860	-		Sama_2556	0.42	-0.8
3,063,861	+		Sama_2556	0.43	-0.2
3,063,861	+		Sama_2556	0.43	+0.2
3,063,861	+		Sama_2556	0.43	-0.4
3,063,861	+		Sama_2556	0.43	-1.7
3,063,861	+		Sama_2556	0.43	+1.9
3,063,861	+		Sama_2556	0.43	+0.7
3,063,861	+		Sama_2556	0.43	+0.9
3,063,861	+		Sama_2556	0.43	+2.3
3,063,861	+		Sama_2556	0.43	+2.2
3,063,861	+		Sama_2556	0.43	-0.1
3,063,862	-		Sama_2556	0.43	+1.7
3,063,862	-		Sama_2556	0.43	+0.2
3,063,862	-		Sama_2556	0.43	-1.9
3,063,862	-		Sama_2556	0.43	+2.7
3,063,862	-		Sama_2556	0.43	-1.9
3,063,862	-		Sama_2556	0.43	-1.7
3,063,862	-		Sama_2556	0.43	+1.7
3,063,862	-		Sama_2556	0.43	+0.9
3,063,862	-		Sama_2556	0.43	-0.5
3,063,896	+		Sama_2556	0.45	-1.4
3,063,985	+		Sama_2556	0.51	-0.4
3,064,021	+		Sama_2556	0.54	+2.2
3,064,021	+		Sama_2556	0.54	-1.5
3,064,021	+		Sama_2556	0.54	+0.9
3,064,021	+		Sama_2556	0.54	+0.0
3,064,021	+		Sama_2556	0.54	+2.0
3,064,021	+		Sama_2556	0.54	-0.6
3,064,021	+		Sama_2556	0.54	+1.8
3,064,022	-		Sama_2556	0.54	-0.6
3,064,022	-		Sama_2556	0.54	+1.1
3,064,022	-		Sama_2556	0.54	+2.2
3,064,022	-		Sama_2556	0.54	+0.6
3,064,022	-		Sama_2556	0.54	+0.3
3,064,022	-		Sama_2556	0.54	+1.2
3,064,022	-		Sama_2556	0.54	+0.9
3,064,106	-		Sama_2556	0.60	+0.4
3,064,121	+		Sama_2556	0.61	+0.7
3,064,121	+		Sama_2556	0.61	+2.4
3,064,121	+		Sama_2556	0.61	-1.0
3,064,121	+		Sama_2556	0.61	-0.2
3,064,121	+		Sama_2556	0.61	+0.7
3,064,121	+		Sama_2556	0.61	-3.1
3,064,121	+		Sama_2556	0.61	-0.4
3,064,121	+		Sama_2556	0.61	+0.2
3,064,121	+		Sama_2556	0.61	-0.8
3,064,121	+		Sama_2556	0.61	+1.5
3,064,121	+		Sama_2556	0.61	+1.2
3,064,121	+		Sama_2556	0.61	+1.5
3,064,122	-		Sama_2556	0.61	-0.2
3,064,122	-		Sama_2556	0.61	+0.7
3,064,122	-		Sama_2556	0.61	+0.5
3,064,122	-		Sama_2556	0.61	+2.3
3,064,122	-		Sama_2556	0.61	+0.8
3,064,122	-		Sama_2556	0.61	+0.8
3,064,122	-		Sama_2556	0.61	-1.5
3,064,122	-		Sama_2556	0.61	-1.1
3,064,122	-		Sama_2556	0.61	+0.4
3,064,122	-		Sama_2556	0.61	-0.7
3,064,122	-		Sama_2556	0.61	-1.7
3,064,122	-		Sama_2556	0.61	+1.2
3,064,122	-		Sama_2556	0.61	-1.9
3,064,122	-		Sama_2556	0.61	+3.5
3,064,134	+		Sama_2556	0.62	+1.3
3,064,150	+		Sama_2556	0.63	+0.3
3,064,150	+		Sama_2556	0.63	+0.3
3,064,150	+		Sama_2556	0.63	+1.2
3,064,151	-		Sama_2556	0.63	-0.7
3,064,151	-		Sama_2556	0.63	-1.3
3,064,151	-		Sama_2556	0.63	+3.0
3,064,202	-		Sama_2556	0.67	-0.8
3,064,202	-		Sama_2556	0.67	+0.3
3,064,202	-		Sama_2556	0.67	+0.1
3,064,209	+		Sama_2556	0.67	+0.4
3,064,244	+		Sama_2556	0.70	+0.3
3,064,244	+		Sama_2556	0.70	-0.9
3,064,244	+		Sama_2556	0.70	+1.8
3,064,244	+		Sama_2556	0.70	-0.1
3,064,258	+		Sama_2556	0.71	+0.5
3,064,258	+		Sama_2556	0.71	+0.5
3,064,342	+		Sama_2556	0.77	+0.3
3,064,342	+		Sama_2556	0.77	+0.2
3,064,342	+		Sama_2556	0.77	-0.0
3,064,376	+		Sama_2556	0.79	-0.5
3,064,376	+		Sama_2556	0.79	+0.2
3,064,377	-		Sama_2556	0.79	+2.6
3,064,377	-		Sama_2556	0.79	+1.6
3,064,377	-		Sama_2556	0.79	+1.0
3,064,377	-		Sama_2556	0.79	+1.3
3,064,377	-		Sama_2556	0.79	+0.4
3,064,380	+		Sama_2556	0.80	+3.2
3,064,380	+		Sama_2556	0.80	-0.7
3,064,380	+		Sama_2556	0.80	+0.8
3,064,381	-		Sama_2556	0.80	-1.3
3,064,381	-		Sama_2556	0.80	-0.8
3,064,381	-		Sama_2556	0.80	-0.7
3,064,381	-		Sama_2556	0.80	+0.1
3,064,421	-		Sama_2556	0.83	+0.9
3,064,463	-		Sama_2556	0.86	+0.2
3,064,463	-		Sama_2556	0.86	+1.1
3,064,503	+		Sama_2556	0.88	+0.7
3,064,503	+		Sama_2556	0.88	-1.9
3,064,504	-		Sama_2556	0.88	-0.7
3,064,544	-				-0.5
3,064,581	-				+2.7
3,064,598	+				+2.0
3,064,598	+				+1.4
3,064,598	+				+0.8
3,064,675	+				+0.5
3,064,675	+				+0.5
3,064,676	-				-0.9
3,064,676	-				+0.4
3,064,742	-		Sama_2557	0.13	+1.1
3,064,742	-		Sama_2557	0.13	+0.3
3,064,828	+		Sama_2557	0.31	+1.0
3,064,828	+		Sama_2557	0.31	-0.8
3,064,828	+		Sama_2557	0.31	-0.0
3,064,865	+		Sama_2557	0.38	+1.5
3,064,866	-		Sama_2557	0.38	+0.4
3,064,866	-		Sama_2557	0.38	+0.4
3,064,866	-		Sama_2557	0.38	-1.4
3,064,917	-		Sama_2557	0.49	+0.6
3,065,035	+		Sama_2557	0.73	-0.5
3,065,036	-		Sama_2557	0.73	-2.2
3,065,036	-		Sama_2557	0.73	-0.3
3,065,055	+		Sama_2557	0.77	-1.3
3,065,056	-		Sama_2557	0.78	+0.1
3,065,056	-		Sama_2557	0.78	-1.2
3,065,056	-		Sama_2557	0.78	+2.0
3,065,149	+				-0.7
3,065,150	-				+1.8
3,065,150	-				+0.5
3,065,150	-				+1.1
3,065,150	-				+0.3
3,065,228	+				+1.1
3,065,229	-				+1.1
3,065,233	+				+0.5
3,065,233	+				-0.3
3,065,233	+				-2.0
3,065,234	-				+0.5
3,065,234	-				-0.6
3,065,234	-				-2.0
3,065,234	-				-1.3
3,065,290	+				-0.2
3,065,339	+				+0.3
3,065,413	+		Sama_2558	0.14	-1.1
3,065,413	+		Sama_2558	0.14	+1.5
3,065,413	+		Sama_2558	0.14	-0.1
3,065,423	+		Sama_2558	0.17	-1.1
3,065,543	+		Sama_2558	0.50	-0.8
3,065,543	+		Sama_2558	0.50	+2.0
3,065,543	+		Sama_2558	0.50	+0.2
3,065,543	+		Sama_2558	0.50	-2.6
3,065,543	+		Sama_2558	0.50	-2.2
3,065,543	+		Sama_2558	0.50	+1.3