Strain Fitness in Shewanella amazonensis SB2B around Sama_2486

Experiment: Anaero. fumarate (e.a.)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaero. fumarate (e.a.)
2,988,008	+		Sama_2485	0.32	-1.1
2,988,019	-		Sama_2485	0.33	+0.5
2,988,019	-		Sama_2485	0.33	-1.1
2,988,019	-		Sama_2485	0.33	-2.4
2,988,045	-		Sama_2485	0.36	+1.5
2,988,045	-		Sama_2485	0.36	-0.0
2,988,045	-		Sama_2485	0.36	-3.0
2,988,045	-		Sama_2485	0.36	-2.3
2,988,073	-		Sama_2485	0.39	-0.8
2,988,073	-		Sama_2485	0.39	-3.3
2,988,073	-		Sama_2485	0.39	-0.9
2,988,085	+		Sama_2485	0.40	-1.0
2,988,085	+		Sama_2485	0.40	-2.5
2,988,086	-		Sama_2485	0.40	-2.1
2,988,086	-		Sama_2485	0.40	-2.2
2,988,086	-		Sama_2485	0.40	-2.1
2,988,135	+		Sama_2485	0.45	+0.4
2,988,136	-		Sama_2485	0.45	-1.6
2,988,173	+		Sama_2485	0.49	-3.8
2,988,190	+		Sama_2485	0.51	-1.2
2,988,190	+		Sama_2485	0.51	-2.1
2,988,190	+		Sama_2485	0.51	-3.0
2,988,191	-		Sama_2485	0.51	-2.2
2,988,325	+		Sama_2485	0.65	-0.8
2,988,325	+		Sama_2485	0.65	-1.7
2,988,325	+		Sama_2485	0.65	-3.4
2,988,326	-		Sama_2485	0.66	-1.5
2,988,355	+		Sama_2485	0.69	-1.4
2,988,356	-		Sama_2485	0.69	-3.0
2,988,395	-		Sama_2485	0.73	-3.0
2,988,446	+		Sama_2485	0.78	-1.0
2,988,446	+		Sama_2485	0.78	-1.1
2,988,447	-		Sama_2485	0.78	-2.4
2,988,447	-		Sama_2485	0.78	-1.7
2,988,447	-		Sama_2485	0.78	-2.6
2,988,450	+		Sama_2485	0.79	+0.5
2,988,450	+		Sama_2485	0.79	-2.4
2,988,450	+		Sama_2485	0.79	-1.1
2,988,450	+		Sama_2485	0.79	-1.0
2,988,450	+		Sama_2485	0.79	-1.4
2,988,450	+		Sama_2485	0.79	-3.2
2,988,450	+		Sama_2485	0.79	-1.3
2,988,450	+		Sama_2485	0.79	-2.2
2,988,451	-		Sama_2485	0.79	-3.3
2,988,451	-		Sama_2485	0.79	-2.6
2,988,451	-		Sama_2485	0.79	-3.0
2,988,451	-		Sama_2485	0.79	-2.1
2,988,451	-		Sama_2485	0.79	-2.1
2,988,451	-		Sama_2485	0.79	-1.7
2,988,451	-		Sama_2485	0.79	-0.7
2,988,451	-		Sama_2485	0.79	-0.3
2,988,451	-		Sama_2485	0.79	-0.8
2,988,493	+		Sama_2485	0.83	-1.3
2,988,494	-		Sama_2485	0.83	-0.8
2,988,503	-		Sama_2485	0.84	-1.5
2,988,503	-		Sama_2485	0.84	-0.7
2,988,520	+		Sama_2485	0.86	-1.6
2,988,520	+		Sama_2485	0.86	-0.5
2,988,521	-		Sama_2485	0.86	-2.8
2,988,521	-		Sama_2485	0.86	-2.2
2,988,521	-		Sama_2485	0.86	+2.3
2,988,545	-		Sama_2485	0.89	-3.8
2,988,608	+				-2.5
2,988,623	-				-2.8
2,988,623	-				-1.3
2,988,635	+				+0.5
2,988,636	-				-0.3
2,988,636	-				-0.4
2,988,644	+				-2.4
2,988,644	+				-3.7
2,988,645	-				-0.8
2,988,645	-				-3.2
2,988,645	-				-1.1
2,988,661	+				-4.2
2,988,661	+				-3.5
2,988,666	+				-2.6
2,988,715	+				-1.7
2,988,728	-				+1.5
2,988,746	-				-1.5
2,988,799	+				-3.3
2,988,799	+				-0.4
2,988,799	+				-3.3
2,988,800	-				-0.5
2,988,800	-				-0.6
2,988,800	-				-0.5
2,988,801	+				-1.7
2,988,968	+				-0.0
2,988,969	-				-2.0
2,988,969	-				-0.8
2,989,083	+		Sama_2486	0.14	+1.7
2,989,083	+		Sama_2486	0.14	+0.4
2,989,083	+		Sama_2486	0.14	-1.3
2,989,084	-		Sama_2486	0.14	-1.2
2,989,196	+		Sama_2486	0.28	-0.9
2,989,196	+		Sama_2486	0.28	-2.0
2,989,233	-		Sama_2486	0.32	-1.8
2,989,233	-		Sama_2486	0.32	-0.8
2,989,233	-		Sama_2486	0.32	-1.9
2,989,310	+		Sama_2486	0.42	-0.5
2,989,333	+		Sama_2486	0.44	-0.8
2,989,333	+		Sama_2486	0.44	+0.4
2,989,333	+		Sama_2486	0.44	+0.2
2,989,333	+		Sama_2486	0.44	-1.7
2,989,333	+		Sama_2486	0.44	+0.3
2,989,334	-		Sama_2486	0.45	-1.1
2,989,334	-		Sama_2486	0.45	-0.4
2,989,334	-		Sama_2486	0.45	+1.0
2,989,334	-		Sama_2486	0.45	-0.8
2,989,334	-		Sama_2486	0.45	-1.0
2,989,336	+		Sama_2486	0.45	-2.1
2,989,336	+		Sama_2486	0.45	-0.5
2,989,336	+		Sama_2486	0.45	-0.7
2,989,337	-		Sama_2486	0.45	-2.1
2,989,337	-		Sama_2486	0.45	-2.1
2,989,337	-		Sama_2486	0.45	-0.8
2,989,446	-		Sama_2486	0.58	+0.6
2,989,446	-		Sama_2486	0.58	-0.9
2,989,446	-		Sama_2486	0.58	-0.5
2,989,449	+		Sama_2486	0.59	-2.0
2,989,449	+		Sama_2486	0.59	-1.6
2,989,449	+		Sama_2486	0.59	+0.7
2,989,449	+		Sama_2486	0.59	+0.6
2,989,450	-		Sama_2486	0.59	+2.4
2,989,450	-		Sama_2486	0.59	-2.6
2,989,482	+		Sama_2486	0.63	+0.5
2,989,528	+		Sama_2486	0.68	+0.0
2,989,528	+		Sama_2486	0.68	-1.2
2,989,528	+		Sama_2486	0.68	+1.5
2,989,529	-		Sama_2486	0.69	-2.0
2,989,529	-		Sama_2486	0.69	+0.7
2,989,529	-		Sama_2486	0.69	-2.3
2,989,529	-		Sama_2486	0.69	-0.1
2,989,529	-		Sama_2486	0.69	-1.5
2,989,666	+		Sama_2486	0.85	-0.6
2,989,666	+		Sama_2486	0.85	-0.7
2,989,667	-		Sama_2486	0.85	-0.8
2,989,677	-		Sama_2486	0.87	+1.2
2,989,725	+				-1.5
2,989,725	+				-2.5
2,989,725	+				+0.3
2,989,725	+				-0.5
2,989,726	-				-0.4
2,989,726	-				-0.0
2,989,726	-				+0.4
2,989,726	-				+2.2
2,989,726	-				-2.8
2,989,726	-				+0.5
2,989,726	-				+0.9
2,989,755	+				+0.8
2,989,756	-				-1.3
2,989,756	-				-0.6
2,989,791	+				-1.5
2,989,791	+				-1.3
2,989,791	+				+0.3
2,989,792	-				-0.8
2,989,792	-				-0.6
2,989,871	-				-2.3
2,989,880	+				+0.1
2,989,996	-				-0.8
2,990,058	+				-0.7
2,990,059	-				-0.5
2,990,173	+		Sama_2487	0.11	-2.4
2,990,173	+		Sama_2487	0.11	-2.0
2,990,173	+		Sama_2487	0.11	-0.3
2,990,173	+		Sama_2487	0.11	-1.5
2,990,173	+		Sama_2487	0.11	-0.8
2,990,174	-		Sama_2487	0.11	-2.1
2,990,174	-		Sama_2487	0.11	+0.0
2,990,174	-		Sama_2487	0.11	+1.2
2,990,174	-		Sama_2487	0.11	-0.8
2,990,203	-		Sama_2487	0.14	+0.3
2,990,270	+		Sama_2487	0.21	+2.1
2,990,270	+		Sama_2487	0.21	+0.2
2,990,271	-		Sama_2487	0.22	-0.3
2,990,271	-		Sama_2487	0.22	-0.4
2,990,271	-		Sama_2487	0.22	-0.0
2,990,366	+		Sama_2487	0.32	-1.0
2,990,367	-		Sama_2487	0.32	+0.5
2,990,367	-		Sama_2487	0.32	-0.5
2,990,414	+		Sama_2487	0.37	-1.2
2,990,420	-		Sama_2487	0.38	-0.2
2,990,423	+		Sama_2487	0.38	+0.3
2,990,513	+		Sama_2487	0.48	-0.2
2,990,541	-		Sama_2487	0.51	+0.7
2,990,569	-		Sama_2487	0.54	+1.8
2,990,569	-		Sama_2487	0.54	-0.8
2,990,569	-		Sama_2487	0.54	-1.3
2,990,569	-		Sama_2487	0.54	+0.1
2,990,576	-		Sama_2487	0.55	-0.1
2,990,662	-		Sama_2487	0.64	-2.2
2,990,662	-		Sama_2487	0.64	-1.1
2,990,703	+		Sama_2487	0.69	+0.0
2,990,704	-		Sama_2487	0.69	-1.5
2,990,760	-		Sama_2487	0.75	-0.5
2,990,760	-		Sama_2487	0.75	-1.8
2,990,760	-		Sama_2487	0.75	-0.8
2,990,760	-		Sama_2487	0.75	+0.8