Strain Fitness in Shewanella amazonensis SB2B around Sama_2444

Experiment: Anaero. fumarate (e.a.)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaero. fumarate (e.a.)
2,940,232	+		Sama_2442	0.76	+4.0
2,940,232	+		Sama_2442	0.76	+3.4
2,940,335	+		Sama_2442	0.83	+0.8
2,940,350	+		Sama_2442	0.84	+3.9
2,940,350	+		Sama_2442	0.84	-1.8
2,940,350	+		Sama_2442	0.84	+5.3
2,940,350	+		Sama_2442	0.84	+2.7
2,940,350	+		Sama_2442	0.84	+5.8
2,940,350	+		Sama_2442	0.84	+1.5
2,940,350	+		Sama_2442	0.84	+4.7
2,940,350	+		Sama_2442	0.84	+3.6
2,940,350	+		Sama_2442	0.84	+5.0
2,940,350	+		Sama_2442	0.84	+0.0
2,940,350	+		Sama_2442	0.84	+4.7
2,940,351	-		Sama_2442	0.84	+6.1
2,940,351	-		Sama_2442	0.84	-0.1
2,940,351	-		Sama_2442	0.84	+4.3
2,940,351	-		Sama_2442	0.84	+4.0
2,940,352	+		Sama_2442	0.84	-2.0
2,940,352	+		Sama_2442	0.84	+7.4
2,940,352	+		Sama_2442	0.84	+3.9
2,940,352	+		Sama_2442	0.84	+3.0
2,940,352	+		Sama_2442	0.84	+5.6
2,940,352	+		Sama_2442	0.84	+3.4
2,940,352	+		Sama_2442	0.84	+4.9
2,940,353	-		Sama_2442	0.84	+3.9
2,940,353	-		Sama_2442	0.84	+5.2
2,940,353	-		Sama_2442	0.84	-0.1
2,940,353	-		Sama_2442	0.84	+0.7
2,940,353	-		Sama_2442	0.84	+5.0
2,940,373	+		Sama_2442	0.86	+3.0
2,940,418	+		Sama_2442	0.89	+6.7
2,940,418	+		Sama_2442	0.89	+1.8
2,940,418	+		Sama_2442	0.89	+4.4
2,940,418	+		Sama_2442	0.89	+7.0
2,940,418	+		Sama_2442	0.89	+2.5
2,940,418	+		Sama_2442	0.89	+0.7
2,940,419	-		Sama_2442	0.89	+5.9
2,940,419	-		Sama_2442	0.89	-0.5
2,940,475	+				+2.6
2,940,475	+				+5.5
2,940,476	-				+5.7
2,940,559	+				+5.3
2,940,559	+				+1.1
2,940,560	-				+7.6
2,940,560	-				+2.5
2,940,572	+				+5.2
2,940,572	+				+4.4
2,940,572	+				+3.3
2,940,572	+				+5.5
2,940,573	-				-0.3
2,940,573	-				+4.9
2,940,573	-				+3.5
2,940,573	-				+4.0
2,940,573	-				+3.7
2,940,573	-				+4.0
2,940,573	-				+5.2
2,940,573	-				+1.2
2,940,643	+		Sama_2443	0.12	+5.3
2,940,643	+		Sama_2443	0.12	-0.4
2,940,649	+		Sama_2443	0.13	+3.1
2,940,649	+		Sama_2443	0.13	+2.6
2,940,650	-		Sama_2443	0.13	+4.6
2,940,650	-		Sama_2443	0.13	+5.1
2,940,671	+		Sama_2443	0.17	+2.2
2,940,672	-		Sama_2443	0.17	+4.4
2,940,678	+		Sama_2443	0.18	+2.5
2,940,679	-		Sama_2443	0.18	+2.6
2,940,865	+		Sama_2443	0.51	+3.6
2,940,932	+		Sama_2443	0.62	+6.2
2,940,933	-		Sama_2443	0.63	+5.5
2,940,944	+		Sama_2443	0.65	+5.7
2,940,961	+		Sama_2443	0.68	+4.3
2,940,961	+		Sama_2443	0.68	+3.7
2,940,961	+		Sama_2443	0.68	+1.1
2,940,995	+		Sama_2443	0.74	+5.8
2,940,995	+		Sama_2443	0.74	+4.7
2,940,995	+		Sama_2443	0.74	-1.1
2,940,995	+		Sama_2443	0.74	+3.8
2,940,996	-		Sama_2443	0.74	+4.2
2,940,996	-		Sama_2443	0.74	+4.7
2,940,996	-		Sama_2443	0.74	+4.8
2,941,051	+		Sama_2443	0.83	+4.1
2,941,051	+		Sama_2443	0.83	+2.7
2,941,052	-		Sama_2443	0.84	+1.1
2,941,052	-		Sama_2443	0.84	+2.2
2,941,052	-		Sama_2443	0.84	+1.0
2,941,055	+		Sama_2443	0.84	+3.2
2,941,055	+		Sama_2443	0.84	+3.7
2,941,056	-		Sama_2443	0.84	+3.6
2,941,056	-		Sama_2443	0.84	+0.2
2,941,056	-		Sama_2443	0.84	-0.5
2,941,056	-		Sama_2443	0.84	+3.1
2,941,132	+				+4.8
2,941,132	+				+4.0
2,941,133	-				+5.9
2,941,133	-				+2.6
2,941,134	+				+1.7
2,941,134	+				+2.9
2,941,134	+				+6.1
2,941,135	-				+2.3
2,941,135	-				+3.2
2,941,143	+				+2.5
2,941,143	+				-1.8
2,941,143	+				+1.0
2,941,144	-				-0.7
2,941,144	-				-0.7
2,941,159	+				+1.6
2,941,159	+				-1.2
2,941,160	-				+1.7
2,941,181	+				+1.7
2,941,181	+				+1.8
2,941,197	-				+0.3
2,941,206	-				+0.7
2,941,280	+				+0.0
2,941,378	+		Sama_2444	0.16	-0.5
2,941,378	+		Sama_2444	0.16	+1.3
2,941,383	+		Sama_2444	0.16	-0.1
2,941,383	+		Sama_2444	0.16	-0.5
2,941,477	-		Sama_2444	0.25	-0.4
2,941,509	+		Sama_2444	0.28	-1.3
2,941,509	+		Sama_2444	0.28	-0.8
2,941,510	-		Sama_2444	0.28	+0.5
2,941,510	-		Sama_2444	0.28	-1.8
2,941,510	-		Sama_2444	0.28	+0.8
2,941,510	-		Sama_2444	0.28	+0.3
2,941,510	-		Sama_2444	0.28	+0.7
2,941,510	-		Sama_2444	0.28	-0.3
2,941,543	-		Sama_2444	0.31	+0.8
2,941,550	+		Sama_2444	0.32	+0.1
2,941,551	-		Sama_2444	0.32	-1.1
2,941,586	+		Sama_2444	0.35	-1.1
2,941,586	+		Sama_2444	0.35	-0.1
2,941,587	-		Sama_2444	0.35	-0.4
2,941,587	-		Sama_2444	0.35	-0.5
2,941,587	-		Sama_2444	0.35	+1.5
2,941,598	+		Sama_2444	0.36	+0.5
2,941,598	+		Sama_2444	0.36	-0.3
2,941,611	+		Sama_2444	0.37	+0.5
2,941,611	+		Sama_2444	0.37	+0.8
2,941,611	+		Sama_2444	0.37	+0.5
2,941,612	-		Sama_2444	0.38	+0.1
2,941,613	+		Sama_2444	0.38	-0.2
2,941,613	+		Sama_2444	0.38	+0.5
2,941,613	+		Sama_2444	0.38	-2.0
2,941,613	+		Sama_2444	0.38	-0.6
2,941,613	+		Sama_2444	0.38	+2.5
2,941,613	+		Sama_2444	0.38	-0.3
2,941,614	-		Sama_2444	0.38	+0.4
2,941,614	-		Sama_2444	0.38	-0.7
2,941,614	-		Sama_2444	0.38	-1.1
2,941,614	-		Sama_2444	0.38	-0.1
2,941,614	-		Sama_2444	0.38	+0.2
2,941,614	-		Sama_2444	0.38	-2.2
2,941,614	-		Sama_2444	0.38	+0.5
2,941,614	-		Sama_2444	0.38	+0.5
2,941,614	-		Sama_2444	0.38	-0.2
2,941,621	+		Sama_2444	0.38	-0.1
2,941,622	-		Sama_2444	0.38	-2.1
2,941,622	-		Sama_2444	0.38	-1.5
2,941,634	+		Sama_2444	0.40	+1.4
2,941,634	+		Sama_2444	0.40	-0.8
2,941,635	-		Sama_2444	0.40	-0.1
2,941,635	-		Sama_2444	0.40	+0.8
2,941,635	-		Sama_2444	0.40	-1.9
2,941,635	-		Sama_2444	0.40	-1.3
2,941,636	+		Sama_2444	0.40	+0.3
2,941,637	-		Sama_2444	0.40	-2.1
2,941,637	-		Sama_2444	0.40	-0.6
2,941,637	-		Sama_2444	0.40	-1.3
2,941,637	-		Sama_2444	0.40	-0.1
2,941,637	-		Sama_2444	0.40	+0.3
2,941,637	-		Sama_2444	0.40	+0.8
2,941,637	-		Sama_2444	0.40	+0.5
2,941,637	-		Sama_2444	0.40	+1.8
2,941,655	+		Sama_2444	0.42	-1.3
2,941,655	+		Sama_2444	0.42	-0.1
2,941,659	+		Sama_2444	0.42	+2.0
2,941,660	-		Sama_2444	0.42	-0.5
2,941,671	+		Sama_2444	0.43	-0.1
2,941,671	+		Sama_2444	0.43	+0.5
2,941,672	-		Sama_2444	0.43	-2.0
2,941,672	-		Sama_2444	0.43	+0.2
2,941,691	+		Sama_2444	0.45	+1.6
2,941,691	+		Sama_2444	0.45	-0.8
2,941,691	+		Sama_2444	0.45	+1.5
2,941,691	+		Sama_2444	0.45	-0.2
2,941,692	-		Sama_2444	0.45	-1.5
2,941,692	-		Sama_2444	0.45	+0.1
2,941,716	+		Sama_2444	0.47	-1.1
2,941,717	-		Sama_2444	0.47	-1.4
2,941,717	-		Sama_2444	0.47	+2.5
2,941,742	+		Sama_2444	0.50	+0.6
2,941,742	+		Sama_2444	0.50	+0.5
2,941,743	-		Sama_2444	0.50	-0.5
2,941,761	+		Sama_2444	0.51	+0.0
2,941,763	+		Sama_2444	0.51	+1.3
2,941,763	+		Sama_2444	0.51	-2.7
2,941,763	+		Sama_2444	0.51	-0.1
2,941,763	+		Sama_2444	0.51	+1.2
2,941,763	+		Sama_2444	0.51	-2.0
2,941,764	-		Sama_2444	0.52	-1.7
2,941,764	-		Sama_2444	0.52	-0.8
2,941,764	-		Sama_2444	0.52	+0.3
2,941,764	-		Sama_2444	0.52	-0.4
2,941,769	+		Sama_2444	0.52	-0.6
2,941,769	+		Sama_2444	0.52	-0.2
2,941,770	-		Sama_2444	0.52	+0.5
2,941,770	-		Sama_2444	0.52	-2.7
2,941,784	+		Sama_2444	0.53	+2.8
2,941,784	+		Sama_2444	0.53	+1.8
2,941,784	+		Sama_2444	0.53	-1.0
2,941,785	-		Sama_2444	0.53	-1.4
2,941,785	-		Sama_2444	0.53	+2.5
2,941,785	-		Sama_2444	0.53	+0.5
2,941,785	-		Sama_2444	0.53	+0.6
2,941,785	-		Sama_2444	0.53	-1.7
2,941,785	-		Sama_2444	0.53	-0.2
2,941,787	+		Sama_2444	0.54	-0.0
2,941,787	+		Sama_2444	0.54	+0.5
2,941,787	+		Sama_2444	0.54	+0.5
2,941,788	-		Sama_2444	0.54	+0.4
2,941,788	-		Sama_2444	0.54	+1.8
2,941,788	-		Sama_2444	0.54	+1.4
2,941,821	+		Sama_2444	0.57	-0.0
2,941,821	+		Sama_2444	0.57	-1.1
2,941,822	-		Sama_2444	0.57	+2.2
2,941,822	-		Sama_2444	0.57	-1.1
2,941,827	+		Sama_2444	0.57	-1.1
2,941,829	+		Sama_2444	0.58	+0.0
2,941,829	+		Sama_2444	0.58	-0.8
2,941,830	-		Sama_2444	0.58	+2.0
2,941,830	-		Sama_2444	0.58	+0.0
2,941,883	+		Sama_2444	0.63	-0.1
2,941,903	-		Sama_2444	0.64	+0.9
2,941,979	+		Sama_2444	0.71	-0.8
2,941,980	-		Sama_2444	0.71	-0.4
2,941,980	-		Sama_2444	0.71	-1.3
2,941,980	-		Sama_2444	0.71	-1.9
2,941,980	-		Sama_2444	0.71	+0.5
2,941,980	-		Sama_2444	0.71	+1.9
2,942,080	+		Sama_2444	0.81	-0.1
2,942,081	-		Sama_2444	0.81	+0.2
2,942,091	-		Sama_2444	0.82	+0.5
2,942,132	+		Sama_2444	0.85	-0.9
2,942,133	-		Sama_2444	0.86	-2.1
2,942,133	-		Sama_2444	0.86	-0.5
2,942,192	+				-0.1
2,942,239	+				-0.2
2,942,239	+				-0.5
2,942,239	+				+0.3
2,942,240	-				-2.0
2,942,245	-				-0.0
2,942,294	-				+0.7
2,942,296	-				+2.7
2,942,306	+				+1.5
2,942,307	-				-0.1
2,942,307	-				+1.2
2,942,329	-				+0.5
2,942,329	-				+0.6
2,942,338	+				-1.3
2,942,338	+				+2.4
2,942,339	-				-2.0
2,942,339	-				-0.6
2,942,339	-				+0.1
2,942,374	+				-0.5
2,942,375	-				-0.5
2,942,381	+				-0.7
2,942,382	-				+1.1
2,942,426	-				+1.5
2,942,426	-				-1.1
2,942,426	-				-0.6
2,942,426	-				-2.6
2,942,426	-				-1.0
2,942,442	-				-1.1
2,942,442	-				-2.0
2,942,442	-				-2.0
2,942,442	-				+1.6
2,942,509	+				-0.1
2,942,509	+				+0.5
2,942,510	-				-0.1
2,942,510	-				+2.7
2,942,510	-				-0.2
2,942,510	-				-0.7
2,942,510	-				-2.0
2,942,510	-				+0.2
2,942,510	-				-1.0
2,942,510	-				+1.1
2,942,510	-				+0.4
2,942,511	+				-0.5
2,942,511	+				+1.5
2,942,511	+				-1.2
2,942,512	-				+1.2
2,942,512	-				-0.4
2,942,512	-				-2.3
2,942,512	-				-3.0
2,942,622	+		Sama_2445	0.17	+0.8
2,942,667	+		Sama_2445	0.21	+1.1
2,942,668	-		Sama_2445	0.21	-0.7
2,942,695	+		Sama_2445	0.23	-0.5
2,942,723	+		Sama_2445	0.25	-1.1
2,942,724	-		Sama_2445	0.25	-1.3
2,942,724	-		Sama_2445	0.25	+1.0
2,942,775	-		Sama_2445	0.29	-2.2
2,942,816	+		Sama_2445	0.32	-1.3
2,942,847	+		Sama_2445	0.34	-1.3
2,942,848	-		Sama_2445	0.34	+0.3
2,942,848	-		Sama_2445	0.34	+1.7
2,942,867	-		Sama_2445	0.36	-0.5
2,942,884	+		Sama_2445	0.37	-0.5
2,942,971	+		Sama_2445	0.44	-1.4
2,942,971	+		Sama_2445	0.44	+0.1
2,942,971	+		Sama_2445	0.44	-0.3
2,942,972	-		Sama_2445	0.44	+0.3
2,943,012	-		Sama_2445	0.47	-0.4
2,943,178	+		Sama_2445	0.59	+0.2
2,943,192	-		Sama_2445	0.60	-0.3
2,943,194	+		Sama_2445	0.60	-0.9
2,943,194	+		Sama_2445	0.60	-0.1
2,943,194	+		Sama_2445	0.60	-2.5
2,943,275	-		Sama_2445	0.66	-0.3