Strain Fitness in Shewanella amazonensis SB2B around Sama_2374

Experiment: Anaero. fumarate (e.a.)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaero. fumarate (e.a.)
2,850,579	+				+1.5
2,850,579	+				+0.3
2,850,580	-				-1.2
2,850,580	-				-0.5
2,850,580	-				-0.9
2,850,635	-				+0.4
2,850,664	+				-1.3
2,850,664	+				-0.7
2,850,665	-				+1.5
2,850,694	-				+0.7
2,850,768	-				-1.7
2,850,777	+				+0.5
2,850,777	+				-1.7
2,850,777	+				+0.5
2,850,777	+				-0.1
2,850,777	+				+1.6
2,850,778	-				+0.0
2,850,778	-				-0.5
2,850,778	-				-1.7
2,850,779	+				-1.3
2,850,779	+				-0.5
2,850,779	+				-3.0
2,850,779	+				+0.4
2,850,779	+				+0.2
2,850,780	-				-0.2
2,850,780	-				+2.2
2,850,780	-				+0.1
2,850,780	-				+0.9
2,850,780	-				+0.4
2,850,780	-				-1.3
2,850,793	+				+1.0
2,850,805	-				-1.4
2,850,810	-				-0.7
2,850,810	-				+1.5
2,850,821	+				+0.3
2,850,838	+				-0.3
2,850,839	-				+2.2
2,850,839	-				-0.8
2,850,861	+				-0.7
2,850,862	-				+1.2
2,850,862	-				+0.1
2,850,862	-				-0.8
2,850,881	+				-1.3
2,850,937	+				-1.4
2,850,950	+				+0.5
2,851,002	-		Sama_2373	0.17	+0.5
2,851,034	+		Sama_2373	0.21	-0.1
2,851,035	-		Sama_2373	0.21	+0.5
2,851,035	-		Sama_2373	0.21	+1.0
2,851,071	+		Sama_2373	0.26	-0.8
2,851,072	-		Sama_2373	0.26	+0.4
2,851,072	-		Sama_2373	0.26	-0.9
2,851,120	-		Sama_2373	0.33	-1.6
2,851,120	-		Sama_2373	0.33	+0.6
2,851,148	+		Sama_2373	0.37	-0.9
2,851,262	+		Sama_2373	0.52	+0.0
2,851,262	+		Sama_2373	0.52	-0.5
2,851,263	-		Sama_2373	0.52	+1.5
2,851,270	+		Sama_2373	0.53	-2.4
2,851,270	+		Sama_2373	0.53	-0.4
2,851,271	-		Sama_2373	0.53	+1.7
2,851,271	-		Sama_2373	0.53	+4.2
2,851,301	-		Sama_2373	0.57	-1.5
2,851,357	+		Sama_2373	0.65	+0.3
2,851,357	+		Sama_2373	0.65	-1.7
2,851,357	+		Sama_2373	0.65	-0.5
2,851,357	+		Sama_2373	0.65	-0.8
2,851,358	-		Sama_2373	0.65	+1.8
2,851,368	+		Sama_2373	0.66	+0.3
2,851,368	+		Sama_2373	0.66	-0.3
2,851,368	+		Sama_2373	0.66	+0.2
2,851,368	+		Sama_2373	0.66	+1.5
2,851,368	+		Sama_2373	0.66	-1.1
2,851,368	+		Sama_2373	0.66	+1.8
2,851,369	-		Sama_2373	0.66	+0.3
2,851,369	-		Sama_2373	0.66	-1.4
2,851,369	-		Sama_2373	0.66	-0.3
2,851,369	-		Sama_2373	0.66	-1.5
2,851,369	-		Sama_2373	0.66	-0.1
2,851,369	-		Sama_2373	0.66	-1.1
2,851,369	-		Sama_2373	0.66	-1.1
2,851,394	+		Sama_2373	0.70	-0.1
2,851,394	+		Sama_2373	0.70	+0.4
2,851,394	+		Sama_2373	0.70	+0.3
2,851,395	-		Sama_2373	0.70	-1.3
2,851,398	+		Sama_2373	0.70	-3.1
2,851,398	+		Sama_2373	0.70	-1.2
2,851,398	+		Sama_2373	0.70	-1.8
2,851,398	+		Sama_2373	0.70	-0.4
2,851,398	+		Sama_2373	0.70	+0.3
2,851,398	+		Sama_2373	0.70	-1.6
2,851,399	-		Sama_2373	0.70	-1.1
2,851,399	-		Sama_2373	0.70	-0.5
2,851,399	-		Sama_2373	0.70	-0.3
2,851,409	+		Sama_2373	0.72	+0.3
2,851,409	+		Sama_2373	0.72	-0.5
2,851,409	+		Sama_2373	0.72	-1.2
2,851,410	-		Sama_2373	0.72	+1.3
2,851,410	-		Sama_2373	0.72	-0.8
2,851,410	-		Sama_2373	0.72	-1.9
2,851,410	-		Sama_2373	0.72	+0.4
2,851,413	+		Sama_2373	0.72	-2.5
2,851,413	+		Sama_2373	0.72	+0.4
2,851,413	+		Sama_2373	0.72	-2.0
2,851,413	+		Sama_2373	0.72	+2.4
2,851,414	-		Sama_2373	0.72	+0.8
2,851,414	-		Sama_2373	0.72	-0.4
2,851,414	-		Sama_2373	0.72	+1.5
2,851,414	-		Sama_2373	0.72	-0.2
2,851,447	+		Sama_2373	0.77	-1.8
2,851,562	+				-0.1
2,851,578	+				-1.3
2,851,617	+				+1.3
2,851,617	+				-0.7
2,851,617	+				+0.8
2,851,617	+				-2.1
2,851,618	-				-0.8
2,851,657	-		Sama_2374	0.21	+1.0
2,851,675	+		Sama_2374	0.26	+4.8
2,851,676	-		Sama_2374	0.26	-0.0
2,851,712	+		Sama_2374	0.36	-0.1
2,851,712	+		Sama_2374	0.36	+0.2
2,851,749	-		Sama_2374	0.46	+0.7
2,851,880	+		Sama_2374	0.81	-1.3
2,851,895	-		Sama_2374	0.85	+0.0
2,851,901	+		Sama_2374	0.87	-0.7
2,851,925	+				+0.2
2,851,925	+				+0.4
2,851,925	+				-0.8
2,851,926	-				-1.9
2,851,926	-				-2.9
2,851,926	-				+0.8
2,851,926	-				-0.4
2,851,944	-				-0.2
2,851,944	-				-1.1
2,851,991	+				+0.0
2,851,992	-				+1.5
2,851,992	-				+0.5
2,851,992	-				-0.6
2,851,992	-				+1.8
2,851,992	-				-0.8
2,851,992	-				+0.0
2,852,063	+				-0.7
2,852,063	+				+0.5
2,852,067	+				-0.1
2,852,067	+				-1.5
2,852,068	-				-0.3
2,852,068	-				-0.2
2,852,068	-				+1.0
2,852,068	-				-1.0
2,852,068	-				-0.1
2,852,068	-				+1.2
2,852,068	-				+0.6
2,852,068	-				-1.3
2,852,071	+				-0.1
2,852,071	+				+0.2
2,852,071	+				+0.8
2,852,072	-				-0.6
2,852,072	-				+2.3
2,852,124	+				-1.1
2,852,125	-				+0.8
2,852,169	+				+0.2
2,852,169	+				-2.3
2,852,188	+				-3.6
2,852,189	-				-0.5
2,852,192	+				+0.7
2,852,239	+				-0.1
2,852,240	-				-0.5
2,852,285	+		Sama_2375	0.10	+0.5
2,852,285	+		Sama_2375	0.10	-0.7
2,852,285	+		Sama_2375	0.10	+0.9
2,852,285	+		Sama_2375	0.10	+1.0
2,852,286	-		Sama_2375	0.10	+0.1
2,852,289	+		Sama_2375	0.11	+0.1
2,852,289	+		Sama_2375	0.11	+0.1
2,852,289	+		Sama_2375	0.11	+1.2
2,852,289	+		Sama_2375	0.11	+1.1
2,852,290	-		Sama_2375	0.11	+0.4
2,852,290	-		Sama_2375	0.11	-0.4
2,852,290	-		Sama_2375	0.11	-1.1
2,852,304	+		Sama_2375	0.12	-0.5
2,852,351	-		Sama_2375	0.15	-1.8
2,852,351	-		Sama_2375	0.15	+1.2
2,852,465	+		Sama_2375	0.23	+0.1
2,852,466	-		Sama_2375	0.23	-0.8
2,852,466	-		Sama_2375	0.23	-0.2
2,852,496	+		Sama_2375	0.25	-0.1
2,852,496	+		Sama_2375	0.25	+0.8
2,852,496	+		Sama_2375	0.25	+0.7
2,852,496	+		Sama_2375	0.25	-0.1
2,852,496	+		Sama_2375	0.25	-0.1
2,852,496	+		Sama_2375	0.25	+0.1
2,852,496	+		Sama_2375	0.25	+2.0
2,852,497	-		Sama_2375	0.25	+2.7
2,852,497	-		Sama_2375	0.25	+0.0
2,852,497	-		Sama_2375	0.25	-1.2
2,852,497	-		Sama_2375	0.25	-1.5
2,852,497	-		Sama_2375	0.25	-2.0
2,852,498	+		Sama_2375	0.25	+0.5
2,852,498	+		Sama_2375	0.25	-1.1
2,852,498	+		Sama_2375	0.25	-1.5
2,852,499	-		Sama_2375	0.25	-0.5
2,852,499	-		Sama_2375	0.25	+2.0
2,852,499	-		Sama_2375	0.25	-0.7
2,852,543	+		Sama_2375	0.28	-0.8
2,852,544	-		Sama_2375	0.28	-1.9
2,852,547	-		Sama_2375	0.29	-2.2
2,852,573	+		Sama_2375	0.30	+0.4
2,852,609	+		Sama_2375	0.33	-0.7
2,852,609	+		Sama_2375	0.33	+1.4
2,852,610	-		Sama_2375	0.33	-2.7
2,852,610	-		Sama_2375	0.33	+0.5
2,852,610	-		Sama_2375	0.33	-0.2
2,852,610	-		Sama_2375	0.33	-1.5
2,852,687	+		Sama_2375	0.38	+2.0
2,852,729	-		Sama_2375	0.41	-1.1
2,852,729	-		Sama_2375	0.41	+0.1
2,852,774	-		Sama_2375	0.44	+0.1
2,852,795	+		Sama_2375	0.46	+0.4
2,852,795	+		Sama_2375	0.46	+1.9
2,852,795	+		Sama_2375	0.46	+1.6
2,852,795	+		Sama_2375	0.46	+0.5
2,852,795	+		Sama_2375	0.46	+0.5
2,852,795	+		Sama_2375	0.46	-0.2
2,852,796	-		Sama_2375	0.46	+0.3
2,852,796	+		Sama_2375	0.46	-1.3
2,852,796	-		Sama_2375	0.46	+1.5
2,852,933	-		Sama_2375	0.55	+0.2
2,852,933	-		Sama_2375	0.55	+0.3