Strain Fitness in Shewanella amazonensis SB2B around Sama_R0037

Experiment: Anaero. fumarate (e.a.)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaero. fumarate (e.a.)
1,164,319	-				+0.9
1,164,328	+		Sama_0963	0.11	+1.1
1,164,328	+		Sama_0963	0.11	+1.0
1,164,328	+		Sama_0963	0.11	+0.8
1,164,328	+		Sama_0963	0.11	+1.4
1,164,328	+		Sama_0963	0.11	+0.0
1,164,329	-		Sama_0963	0.11	+3.6
1,164,329	-		Sama_0963	0.11	-1.7
1,164,352	-		Sama_0963	0.13	+4.3
1,164,352	-		Sama_0963	0.13	+1.9
1,164,449	-		Sama_0963	0.24	-1.7
1,164,457	-		Sama_0963	0.24	+2.4
1,164,524	+		Sama_0963	0.31	-0.5
1,164,524	+		Sama_0963	0.31	-0.2
1,164,577	-		Sama_0963	0.37	+1.4
1,164,609	+		Sama_0963	0.40	+1.0
1,164,609	+		Sama_0963	0.40	+1.6
1,164,609	+		Sama_0963	0.40	+0.7
1,164,610	-		Sama_0963	0.41	+1.2
1,164,610	-		Sama_0963	0.41	-0.6
1,164,613	+		Sama_0963	0.41	+2.0
1,164,613	+		Sama_0963	0.41	+0.8
1,164,613	+		Sama_0963	0.41	+2.8
1,164,631	+		Sama_0963	0.43	+0.0
1,164,631	+		Sama_0963	0.43	-0.9
1,164,631	+		Sama_0963	0.43	+0.8
1,164,632	-		Sama_0963	0.43	-0.5
1,164,632	-		Sama_0963	0.43	+0.8
1,164,632	-		Sama_0963	0.43	-0.6
1,164,633	+		Sama_0963	0.43	+0.6
1,164,633	+		Sama_0963	0.43	+0.6
1,164,633	+		Sama_0963	0.43	+2.2
1,164,633	+		Sama_0963	0.43	+2.2
1,164,633	+		Sama_0963	0.43	+1.4
1,164,633	+		Sama_0963	0.43	+0.1
1,164,633	+		Sama_0963	0.43	-1.9
1,164,633	+		Sama_0963	0.43	-1.2
1,164,633	+		Sama_0963	0.43	+2.4
1,164,633	+		Sama_0963	0.43	+2.8
1,164,633	+		Sama_0963	0.43	-2.0
1,164,633	+		Sama_0963	0.43	+1.2
1,164,633	+		Sama_0963	0.43	-0.1
1,164,633	+		Sama_0963	0.43	-1.5
1,164,634	-		Sama_0963	0.43	+0.6
1,164,634	-		Sama_0963	0.43	+1.5
1,164,634	-		Sama_0963	0.43	+1.6
1,164,634	-		Sama_0963	0.43	+3.4
1,164,634	-		Sama_0963	0.43	-0.4
1,164,634	-		Sama_0963	0.43	+1.3
1,164,634	-		Sama_0963	0.43	+0.4
1,164,634	-		Sama_0963	0.43	+0.4
1,164,634	-		Sama_0963	0.43	+0.6
1,164,637	+		Sama_0963	0.43	+2.1
1,164,637	+		Sama_0963	0.43	+1.6
1,164,637	+		Sama_0963	0.43	+2.2
1,164,637	+		Sama_0963	0.43	-1.6
1,164,638	-		Sama_0963	0.43	+1.5
1,164,638	-		Sama_0963	0.43	+1.7
1,164,638	-		Sama_0963	0.43	-0.1
1,164,638	-		Sama_0963	0.43	+1.0
1,164,638	-		Sama_0963	0.43	+2.4
1,164,638	-		Sama_0963	0.43	+2.0
1,164,638	-		Sama_0963	0.43	+0.3
1,164,638	-		Sama_0963	0.43	-0.5
1,164,638	-		Sama_0963	0.43	+1.4
1,164,638	-		Sama_0963	0.43	+1.8
1,164,652	-		Sama_0963	0.45	+1.1
1,164,696	+		Sama_0963	0.50	+1.0
1,164,735	+		Sama_0963	0.54	-0.3
1,164,753	+		Sama_0963	0.56	+1.7
1,164,753	+		Sama_0963	0.56	-0.6
1,164,753	+		Sama_0963	0.56	+1.3
1,164,753	+		Sama_0963	0.56	+2.4
1,164,754	-		Sama_0963	0.56	-1.0
1,164,754	-		Sama_0963	0.56	-0.3
1,164,757	+		Sama_0963	0.56	+0.7
1,164,757	+		Sama_0963	0.56	+3.0
1,164,757	+		Sama_0963	0.56	+1.3
1,164,757	+		Sama_0963	0.56	+0.6
1,164,757	+		Sama_0963	0.56	+0.2
1,164,757	+		Sama_0963	0.56	-0.3
1,164,757	+		Sama_0963	0.56	+0.0
1,164,757	+		Sama_0963	0.56	+0.0
1,164,757	+		Sama_0963	0.56	+3.8
1,164,757	+		Sama_0963	0.56	+1.0
1,164,757	+		Sama_0963	0.56	+0.7
1,164,757	+		Sama_0963	0.56	-1.2
1,164,757	+		Sama_0963	0.56	+0.8
1,164,757	+		Sama_0963	0.56	+3.2
1,164,757	+		Sama_0963	0.56	-0.9
1,164,757	+		Sama_0963	0.56	+0.5
1,164,757	+		Sama_0963	0.56	-0.6
1,164,757	+		Sama_0963	0.56	+1.4
1,164,757	+		Sama_0963	0.56	-0.1
1,164,757	+		Sama_0963	0.56	+0.6
1,164,757	+		Sama_0963	0.56	-0.2
1,164,757	+		Sama_0963	0.56	+1.3
1,164,757	+		Sama_0963	0.56	-1.4
1,164,757	+		Sama_0963	0.56	+0.9
1,164,757	+		Sama_0963	0.56	+1.8
1,164,757	+		Sama_0963	0.56	+0.6
1,164,757	+		Sama_0963	0.56	+3.3
1,164,757	+		Sama_0963	0.56	+1.2
1,164,757	+		Sama_0963	0.56	+2.7
1,164,757	+		Sama_0963	0.56	+1.5
1,164,757	+		Sama_0963	0.56	+0.2
1,164,757	+		Sama_0963	0.56	+0.5
1,164,757	+		Sama_0963	0.56	+1.1
1,164,757	+		Sama_0963	0.56	+1.6
1,164,757	+		Sama_0963	0.56	+1.1
1,164,757	+		Sama_0963	0.56	-1.4
1,164,757	+		Sama_0963	0.56	+1.8
1,164,757	+		Sama_0963	0.56	+2.3
1,164,758	-		Sama_0963	0.56	+0.2
1,164,758	-		Sama_0963	0.56	+1.8
1,164,758	-		Sama_0963	0.56	-1.2
1,164,758	-		Sama_0963	0.56	+2.9
1,164,758	-		Sama_0963	0.56	+1.7
1,164,758	-		Sama_0963	0.56	-0.4
1,164,758	-		Sama_0963	0.56	+0.1
1,164,758	-		Sama_0963	0.56	+0.0
1,164,758	-		Sama_0963	0.56	-0.4
1,164,758	-		Sama_0963	0.56	-0.3
1,164,758	-		Sama_0963	0.56	-0.4
1,164,758	-		Sama_0963	0.56	+1.8
1,164,758	-		Sama_0963	0.56	+4.7
1,164,758	-		Sama_0963	0.56	+1.0
1,164,758	-		Sama_0963	0.56	-0.7
1,164,758	-		Sama_0963	0.56	+1.6
1,164,758	-		Sama_0963	0.56	+3.6
1,164,758	-		Sama_0963	0.56	+3.3
1,164,758	-		Sama_0963	0.56	-1.6
1,164,758	-		Sama_0963	0.56	-0.7
1,164,758	-		Sama_0963	0.56	+2.8
1,164,758	-		Sama_0963	0.56	+1.2
1,164,758	-		Sama_0963	0.56	+1.4
1,164,758	-		Sama_0963	0.56	+1.3
1,164,758	-		Sama_0963	0.56	+0.6
1,164,758	-		Sama_0963	0.56	+0.6
1,164,758	-		Sama_0963	0.56	-0.4
1,164,758	-		Sama_0963	0.56	+1.9
1,164,758	-		Sama_0963	0.56	-1.4
1,164,758	-		Sama_0963	0.56	+1.2
1,164,758	-		Sama_0963	0.56	-1.4
1,164,758	-		Sama_0963	0.56	-1.3
1,164,758	-		Sama_0963	0.56	+1.0
1,164,758	-		Sama_0963	0.56	-0.5
1,164,761	+		Sama_0963	0.56	+1.8
1,164,761	+		Sama_0963	0.56	+2.8
1,164,761	+		Sama_0963	0.56	-1.2
1,164,761	+		Sama_0963	0.56	-0.3
1,164,761	+		Sama_0963	0.56	+1.4
1,164,761	+		Sama_0963	0.56	+1.7
1,164,761	+		Sama_0963	0.56	+2.5
1,164,761	+		Sama_0963	0.56	-0.4
1,164,761	+		Sama_0963	0.56	+4.3
1,164,761	+		Sama_0963	0.56	-0.3
1,164,761	+		Sama_0963	0.56	+1.3
1,164,761	+		Sama_0963	0.56	+0.9
1,164,761	+		Sama_0963	0.56	+0.8
1,164,761	+		Sama_0963	0.56	+0.6
1,164,761	+		Sama_0963	0.56	+0.6
1,164,761	+		Sama_0963	0.56	+2.1
1,164,761	+		Sama_0963	0.56	+0.2
1,164,761	+		Sama_0963	0.56	+0.1
1,164,762	-		Sama_0963	0.57	+0.9
1,164,762	-		Sama_0963	0.57	-0.2
1,164,762	-		Sama_0963	0.57	+1.3
1,164,762	-		Sama_0963	0.57	-0.2
1,164,762	-		Sama_0963	0.57	+1.7
1,164,762	-		Sama_0963	0.57	+1.5
1,164,762	-		Sama_0963	0.57	+0.7
1,164,762	-		Sama_0963	0.57	+2.7
1,164,762	-		Sama_0963	0.57	-2.0
1,164,762	-		Sama_0963	0.57	+5.9
1,164,762	-		Sama_0963	0.57	+2.1
1,164,762	-		Sama_0963	0.57	-1.0
1,164,762	-		Sama_0963	0.57	-0.6
1,164,762	-		Sama_0963	0.57	-0.6
1,164,762	-		Sama_0963	0.57	+1.6
1,164,762	-		Sama_0963	0.57	+2.8
1,164,762	-		Sama_0963	0.57	+1.6
1,164,762	-		Sama_0963	0.57	+4.4
1,164,762	-		Sama_0963	0.57	-1.6
1,164,765	+		Sama_0963	0.57	+1.7
1,164,765	+		Sama_0963	0.57	+0.0
1,164,765	+		Sama_0963	0.57	+2.7
1,164,765	+		Sama_0963	0.57	+1.6
1,164,765	+		Sama_0963	0.57	+2.4
1,164,766	-		Sama_0963	0.57	+0.6
1,164,766	-		Sama_0963	0.57	+1.6
1,164,816	+		Sama_0963	0.62	+2.0
1,164,816	+		Sama_0963	0.62	-0.3
1,164,817	-		Sama_0963	0.62	+1.6
1,164,817	-		Sama_0963	0.62	+1.8
1,164,817	-		Sama_0963	0.62	+0.4
1,164,850	+		Sama_0963	0.66	+1.5
1,164,858	+		Sama_0963	0.67	-1.0
1,164,858	+		Sama_0963	0.67	+0.6
1,164,859	-		Sama_0963	0.67	+0.6
1,164,859	-		Sama_0963	0.67	-0.6
1,164,859	-		Sama_0963	0.67	-0.7
1,164,859	-		Sama_0963	0.67	+1.7
1,164,859	-		Sama_0963	0.67	+2.2
1,164,988	-		Sama_0963	0.80	+3.2
1,164,988	-		Sama_0963	0.80	-0.5
1,165,009	+		Sama_0963	0.83	-0.3
1,165,068	+		Sama_0963	0.89	-1.4
1,165,068	+		Sama_0963	0.89	+0.5
1,165,068	+		Sama_0963	0.89	+0.3
1,165,069	-		Sama_0963	0.89	+1.0
1,165,071	+		Sama_0963	0.89	-1.2
1,165,072	-		Sama_0963	0.89	+1.6
1,165,072	-		Sama_0963	0.89	+1.4
1,165,156	+				-0.2
1,165,171	+				-1.6
1,165,172	-				+1.2
1,165,652	+				+0.4
1,165,679	-				+1.8
1,165,694	+				+1.0
1,165,695	-				-1.9
1,165,872	+		Sama_0965	0.13	-1.6
1,165,893	-		Sama_0965	0.14	+1.0
1,165,927	+		Sama_0965	0.16	+0.0
1,165,927	+		Sama_0965	0.16	+1.4
1,165,927	+		Sama_0965	0.16	-1.1
1,165,927	+		Sama_0965	0.16	-1.0
1,165,927	+		Sama_0965	0.16	+0.8
1,165,928	-		Sama_0965	0.16	-0.3
1,165,928	-		Sama_0965	0.16	+0.0
1,165,928	-		Sama_0965	0.16	-0.5
1,165,928	-		Sama_0965	0.16	-1.0
1,165,928	-		Sama_0965	0.16	-2.0
1,165,928	-		Sama_0965	0.16	-2.2
1,165,974	+		Sama_0965	0.18	-0.4
1,166,039	-		Sama_0965	0.21	-1.4
1,166,045	+		Sama_0965	0.21	+0.5
1,166,046	-		Sama_0965	0.21	-0.3
1,166,138	+		Sama_0965	0.26	-0.7
1,166,138	+		Sama_0965	0.26	+0.8
1,166,139	-		Sama_0965	0.26	-1.0
1,166,139	-		Sama_0965	0.26	-0.6
1,166,166	+		Sama_0965	0.27	-0.2
1,166,167	-		Sama_0965	0.27	-2.0
1,166,194	+		Sama_0965	0.29	+1.5
1,166,195	-		Sama_0965	0.29	+0.1
1,166,233	-		Sama_0965	0.31	+0.1
1,166,248	+		Sama_0965	0.31	+0.2
1,166,278	-		Sama_0965	0.33	-0.7
1,166,302	-		Sama_0965	0.34	+0.9
1,166,302	-		Sama_0965	0.34	-0.3
1,166,302	-		Sama_0965	0.34	-0.7