Strain Fitness in Shewanella amazonensis SB2B around Sama_0939

Experiment: Anaero. fumarate (e.a.)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaero. fumarate (e.a.)
1,134,097	+		Sama_0938	0.67	+0.0
1,134,098	-		Sama_0938	0.67	-1.1
1,134,108	+		Sama_0938	0.67	+0.0
1,134,108	+		Sama_0938	0.67	-0.8
1,134,108	+		Sama_0938	0.67	-2.5
1,134,108	+		Sama_0938	0.67	-0.3
1,134,109	-		Sama_0938	0.67	-0.2
1,134,109	-		Sama_0938	0.67	-0.3
1,134,118	+		Sama_0938	0.67	-0.3
1,134,118	+		Sama_0938	0.67	+1.2
1,134,119	-		Sama_0938	0.68	+0.4
1,134,119	-		Sama_0938	0.68	-1.2
1,134,119	-		Sama_0938	0.68	+1.8
1,134,119	-		Sama_0938	0.68	+0.8
1,134,130	+		Sama_0938	0.68	+0.2
1,134,161	+		Sama_0938	0.69	-0.7
1,134,189	-		Sama_0938	0.70	+0.5
1,134,205	-		Sama_0938	0.71	-0.4
1,134,273	+		Sama_0938	0.73	-1.4
1,134,274	-		Sama_0938	0.73	-2.2
1,134,274	-		Sama_0938	0.73	-1.7
1,134,274	-		Sama_0938	0.73	-0.2
1,134,274	-		Sama_0938	0.73	-0.1
1,134,330	+		Sama_0938	0.76	-1.5
1,134,331	-		Sama_0938	0.76	+0.6
1,134,331	-		Sama_0938	0.76	+2.0
1,134,331	-		Sama_0938	0.76	+0.9
1,134,331	-		Sama_0938	0.76	+0.6
1,134,333	+		Sama_0938	0.76	+0.0
1,134,333	+		Sama_0938	0.76	-2.5
1,134,333	+		Sama_0938	0.76	+0.2
1,134,334	-		Sama_0938	0.76	+1.2
1,134,334	-		Sama_0938	0.76	+0.4
1,134,336	+		Sama_0938	0.76	+0.1
1,134,336	+		Sama_0938	0.76	+0.6
1,134,336	+		Sama_0938	0.76	+0.7
1,134,337	-		Sama_0938	0.76	+0.6
1,134,337	-		Sama_0938	0.76	-1.0
1,134,337	-		Sama_0938	0.76	+1.1
1,134,337	-		Sama_0938	0.76	-0.2
1,134,366	+		Sama_0938	0.77	-0.7
1,134,367	-		Sama_0938	0.77	-1.3
1,134,480	+		Sama_0938	0.81	-0.4
1,134,480	+		Sama_0938	0.81	-0.8
1,134,480	+		Sama_0938	0.81	-1.4
1,134,480	+		Sama_0938	0.81	+0.4
1,134,480	+		Sama_0938	0.81	-3.1
1,134,481	-		Sama_0938	0.81	+0.5
1,134,481	-		Sama_0938	0.81	+0.2
1,134,481	-		Sama_0938	0.81	-0.5
1,134,503	+		Sama_0938	0.82	-0.5
1,134,503	+		Sama_0938	0.82	-2.6
1,134,567	+		Sama_0938	0.84	+0.1
1,134,567	+		Sama_0938	0.84	-0.9
1,134,567	+		Sama_0938	0.84	+1.4
1,134,567	+		Sama_0938	0.84	+2.6
1,134,567	+		Sama_0938	0.84	-1.3
1,134,567	+		Sama_0938	0.84	-0.2
1,134,568	-		Sama_0938	0.85	+0.7
1,134,568	-		Sama_0938	0.85	-0.1
1,134,568	-		Sama_0938	0.85	+0.7
1,134,568	-		Sama_0938	0.85	+2.0
1,134,603	+		Sama_0938	0.86	+0.0
1,134,603	+		Sama_0938	0.86	+0.0
1,134,603	+		Sama_0938	0.86	-2.3
1,134,603	+		Sama_0938	0.86	+0.0
1,134,604	-		Sama_0938	0.86	-1.7
1,134,604	-		Sama_0938	0.86	-0.5
1,134,604	-		Sama_0938	0.86	-1.3
1,134,604	-		Sama_0938	0.86	-1.4
1,134,604	-		Sama_0938	0.86	+1.3
1,134,615	-		Sama_0938	0.86	-1.0
1,134,622	+		Sama_0938	0.87	-2.7
1,134,678	-		Sama_0938	0.89	+0.8
1,134,699	+		Sama_0938	0.89	-0.2
1,134,699	+		Sama_0938	0.89	-1.0
1,134,699	+		Sama_0938	0.89	-0.8
1,134,699	+		Sama_0938	0.89	+0.3
1,134,699	+		Sama_0938	0.89	-0.4
1,134,700	-		Sama_0938	0.89	+0.7
1,134,700	-		Sama_0938	0.89	-1.8
1,134,717	+				-0.7
1,134,717	+				+1.7
1,134,717	+				-1.3
1,134,717	+				+0.8
1,134,717	+				-3.3
1,134,717	+				+2.0
1,134,717	+				-1.8
1,134,717	+				+0.5
1,134,717	+				+0.5
1,134,717	+				-0.6
1,134,718	-				-1.9
1,134,718	-				+0.1
1,134,718	-				+1.2
1,134,718	-				-0.2
1,134,718	-				-1.0
1,134,718	-				-2.3
1,134,732	+				+2.2
1,134,733	-				+0.7
1,134,741	+				+0.1
1,134,741	+				+0.6
1,134,742	-				-0.6
1,134,742	-				+1.1
1,134,744	+				-2.0
1,134,893	+				-0.5
1,134,948	+				-0.2
1,134,948	+				-2.2
1,134,948	+				+0.8
1,134,948	+				+0.1
1,134,948	+				-0.1
1,134,948	+				+0.6
1,134,949	-				-2.2
1,134,949	-				+1.7
1,134,950	+				-0.3
1,134,950	+				+0.4
1,134,950	+				+3.1
1,134,950	+				-0.1
1,134,950	+				+0.5
1,134,950	+				+1.8
1,134,951	-				-0.7
1,134,951	-				-0.3
1,134,951	-				+0.3
1,134,951	-				+0.3
1,134,951	-				+0.6
1,134,951	-				-1.2
1,134,951	-				+0.9
1,134,975	+				-1.2
1,134,980	+				+0.0
1,134,980	+				+0.6
1,134,980	+				-1.1
1,134,980	+				-0.2
1,134,980	+				-0.6
1,134,981	-				+1.4
1,134,981	-				+0.5
1,134,988	+				-0.6
1,134,989	-				-0.3
1,134,989	-				+0.0
1,134,989	-				+1.6
1,134,992	-				+1.0
1,135,020	+				-2.9
1,135,061	+				+1.4
1,135,076	+				-0.7
1,135,076	+				+1.0
1,135,142	-				+1.0
1,135,200	+		Sama_0939	0.10	+2.0
1,135,200	+		Sama_0939	0.10	+0.1
1,135,200	+		Sama_0939	0.10	-0.4
1,135,200	+		Sama_0939	0.10	-1.7
1,135,201	-		Sama_0939	0.10	-0.4
1,135,201	-		Sama_0939	0.10	-0.9
1,135,201	-		Sama_0939	0.10	+1.6
1,135,201	-		Sama_0939	0.10	-2.4
1,135,201	-		Sama_0939	0.10	+1.8
1,135,201	-		Sama_0939	0.10	-0.5
1,135,202	+		Sama_0939	0.11	+0.2
1,135,202	+		Sama_0939	0.11	+2.4
1,135,202	+		Sama_0939	0.11	+0.0
1,135,203	-		Sama_0939	0.11	+2.1
1,135,262	+		Sama_0939	0.15	-0.1
1,135,262	+		Sama_0939	0.15	-1.0
1,135,262	+		Sama_0939	0.15	+1.3
1,135,263	-		Sama_0939	0.15	-0.1
1,135,283	+		Sama_0939	0.16	-0.9
1,135,284	-		Sama_0939	0.16	+0.8
1,135,284	-		Sama_0939	0.16	-1.2
1,135,284	-		Sama_0939	0.16	+0.5
1,135,329	+		Sama_0939	0.19	+2.7
1,135,329	+		Sama_0939	0.19	-0.6
1,135,330	-		Sama_0939	0.19	-0.8
1,135,330	-		Sama_0939	0.19	-0.4
1,135,332	+		Sama_0939	0.19	+0.4
1,135,332	+		Sama_0939	0.19	+1.8
1,135,332	+		Sama_0939	0.19	+0.9
1,135,332	+		Sama_0939	0.19	-0.1
1,135,333	-		Sama_0939	0.19	+2.3
1,135,333	-		Sama_0939	0.19	+1.2
1,135,333	-		Sama_0939	0.19	+1.9
1,135,333	-		Sama_0939	0.19	-0.2
1,135,333	-		Sama_0939	0.19	-0.8
1,135,333	-		Sama_0939	0.19	+0.7
1,135,380	+		Sama_0939	0.22	-1.7
1,135,401	-		Sama_0939	0.24	+1.9
1,135,426	+		Sama_0939	0.25	+1.6
1,135,426	+		Sama_0939	0.25	-1.9
1,135,426	+		Sama_0939	0.25	+3.0
1,135,426	+		Sama_0939	0.25	-0.8
1,135,426	+		Sama_0939	0.25	-1.9
1,135,426	+		Sama_0939	0.25	+0.0
1,135,427	-		Sama_0939	0.25	+0.1
1,135,427	-		Sama_0939	0.25	+1.0
1,135,427	-		Sama_0939	0.25	-0.3
1,135,427	-		Sama_0939	0.25	-0.9
1,135,427	-		Sama_0939	0.25	-1.2
1,135,466	+		Sama_0939	0.28	+0.1
1,135,466	+		Sama_0939	0.28	+0.6
1,135,466	+		Sama_0939	0.28	-1.0
1,135,466	+		Sama_0939	0.28	-0.6
1,135,466	+		Sama_0939	0.28	-0.9
1,135,467	-		Sama_0939	0.28	-1.8
1,135,483	-		Sama_0939	0.29	-1.1
1,135,500	+		Sama_0939	0.30	-1.4
1,135,500	+		Sama_0939	0.30	-1.0
1,135,500	+		Sama_0939	0.30	-1.6
1,135,500	+		Sama_0939	0.30	-0.7
1,135,500	+		Sama_0939	0.30	-0.3
1,135,500	+		Sama_0939	0.30	+1.5
1,135,501	-		Sama_0939	0.30	-1.3
1,135,501	-		Sama_0939	0.30	-1.0
1,135,544	+		Sama_0939	0.33	-0.2
1,135,545	-		Sama_0939	0.33	-0.2
1,135,545	-		Sama_0939	0.33	-0.9
1,135,545	-		Sama_0939	0.33	+1.5
1,135,575	+		Sama_0939	0.35	-1.3
1,135,575	+		Sama_0939	0.35	+1.5
1,135,576	-		Sama_0939	0.35	-0.7
1,135,637	+		Sama_0939	0.39	-2.0
1,135,638	-		Sama_0939	0.39	-0.6
1,135,653	-		Sama_0939	0.40	+0.4
1,135,699	+		Sama_0939	0.43	+0.4
1,135,699	+		Sama_0939	0.43	-0.4
1,135,718	+		Sama_0939	0.44	+0.2
1,135,718	+		Sama_0939	0.44	-0.7
1,135,719	-		Sama_0939	0.44	+0.8
1,135,769	-		Sama_0939	0.48	+0.6
1,135,769	-		Sama_0939	0.48	-2.1
1,135,771	+		Sama_0939	0.48	+1.7
1,135,771	+		Sama_0939	0.48	-0.7
1,135,771	+		Sama_0939	0.48	+0.8
1,135,771	+		Sama_0939	0.48	+1.2
1,135,772	-		Sama_0939	0.48	+0.4
1,135,772	-		Sama_0939	0.48	+0.0
1,135,772	-		Sama_0939	0.48	+0.1
1,135,772	-		Sama_0939	0.48	+2.3
1,135,772	-		Sama_0939	0.48	+1.6
1,135,812	+		Sama_0939	0.51	-0.7
1,135,814	+		Sama_0939	0.51	+1.8
1,135,814	+		Sama_0939	0.51	+0.7
1,135,853	+		Sama_0939	0.53	-0.6
1,135,861	+		Sama_0939	0.54	+2.0
1,135,891	-		Sama_0939	0.56	-1.1
1,135,902	+		Sama_0939	0.56	+0.9
1,135,902	+		Sama_0939	0.56	+0.5
1,135,902	+		Sama_0939	0.56	-1.0
1,135,903	-		Sama_0939	0.57	+2.3
1,135,903	-		Sama_0939	0.57	+1.8
1,135,903	-		Sama_0939	0.57	+0.2
1,135,903	-		Sama_0939	0.57	-1.0
1,135,903	-		Sama_0939	0.57	+0.3
1,135,903	-		Sama_0939	0.57	-2.7
1,135,903	-		Sama_0939	0.57	+0.7
1,135,942	-		Sama_0939	0.59	+0.6
1,135,942	-		Sama_0939	0.59	-1.0
1,135,942	-		Sama_0939	0.59	-1.4
1,135,966	+		Sama_0939	0.61	-1.8
1,135,966	+		Sama_0939	0.61	+1.5
1,135,966	+		Sama_0939	0.61	+1.1
1,136,150	-		Sama_0939	0.73	+1.6
1,136,150	-		Sama_0939	0.73	-1.2
1,136,150	-		Sama_0939	0.73	+2.1
1,136,153	+		Sama_0939	0.73	-0.2
1,136,160	+		Sama_0939	0.73	+0.9
1,136,161	-		Sama_0939	0.73	-0.7
1,136,161	-		Sama_0939	0.73	-1.7
1,136,163	+		Sama_0939	0.74	+0.7
1,136,163	+		Sama_0939	0.74	-0.1
1,136,163	+		Sama_0939	0.74	-0.8
1,136,163	+		Sama_0939	0.74	+1.4
1,136,163	+		Sama_0939	0.74	+0.0
1,136,163	+		Sama_0939	0.74	-0.3
1,136,164	-		Sama_0939	0.74	-0.6
1,136,164	-		Sama_0939	0.74	+1.1
1,136,164	-		Sama_0939	0.74	+0.0
1,136,164	-		Sama_0939	0.74	-0.4
1,136,164	-		Sama_0939	0.74	+0.5
1,136,177	+		Sama_0939	0.75	-0.5
1,136,177	+		Sama_0939	0.75	+0.3
1,136,178	-		Sama_0939	0.75	-2.1
1,136,178	-		Sama_0939	0.75	+2.6
1,136,178	-		Sama_0939	0.75	-0.4
1,136,181	+		Sama_0939	0.75	+0.9
1,136,181	+		Sama_0939	0.75	+0.8
1,136,181	+		Sama_0939	0.75	+0.6
1,136,181	+		Sama_0939	0.75	-2.6
1,136,182	-		Sama_0939	0.75	+1.0
1,136,185	+		Sama_0939	0.75	-0.4
1,136,185	+		Sama_0939	0.75	+0.6
1,136,185	+		Sama_0939	0.75	-1.1
1,136,185	+		Sama_0939	0.75	+0.5
1,136,186	-		Sama_0939	0.75	+0.0
1,136,221	-		Sama_0939	0.77	-1.1
1,136,221	-		Sama_0939	0.77	+0.7
1,136,221	-		Sama_0939	0.77	-0.4
1,136,294	-		Sama_0939	0.82	+0.0
1,136,385	+		Sama_0939	0.88	+0.5
1,136,385	+		Sama_0939	0.88	+1.3
1,136,385	+		Sama_0939	0.88	+2.1
1,136,385	+		Sama_0939	0.88	+0.5
1,136,385	+		Sama_0939	0.88	-0.4
1,136,385	+		Sama_0939	0.88	+1.1
1,136,385	+		Sama_0939	0.88	-1.2
1,136,386	-		Sama_0939	0.88	-0.6
1,136,386	-		Sama_0939	0.88	+0.6
1,136,386	-		Sama_0939	0.88	+1.6
1,136,386	-		Sama_0939	0.88	-0.2
1,136,386	-		Sama_0939	0.88	+1.4
1,136,386	-		Sama_0939	0.88	-0.4
1,136,386	-		Sama_0939	0.88	-1.4
1,136,395	-		Sama_0939	0.89	+0.6
1,136,443	+				-1.7
1,136,443	+				+1.5
1,136,444	-				-1.0
1,136,576	+				-1.4
1,136,576	+				+2.0
1,136,576	+				+1.0
1,136,577	-				+1.1
1,136,577	-				-1.0
1,136,618	+				+0.1
1,136,634	-				+0.5
1,136,634	-				-1.2
1,136,681	+				-1.4
1,136,681	+				+0.0
1,136,681	+				+0.6
1,136,681	+				-1.3
1,136,682	-				-0.4
1,136,682	-				+0.4
1,136,682	-				-0.2
1,136,682	-				+1.1
1,136,765	+		Sama_0940	0.19	-0.2
1,136,765	+		Sama_0940	0.19	+0.0
1,136,765	+		Sama_0940	0.19	-0.6
1,136,765	+		Sama_0940	0.19	-0.5
1,136,765	+		Sama_0940	0.19	+0.7
1,136,766	-		Sama_0940	0.19	+0.3
1,136,766	-		Sama_0940	0.19	-3.2
1,136,766	-		Sama_0940	0.19	+0.3
1,136,766	-		Sama_0940	0.19	+1.0
1,136,766	-		Sama_0940	0.19	-2.3
1,136,766	-		Sama_0940	0.19	+0.2
1,136,766	-		Sama_0940	0.19	-0.4
1,136,777	+		Sama_0940	0.21	+2.5
1,136,778	-		Sama_0940	0.21	-1.9
1,136,855	-		Sama_0940	0.32	-0.1
1,136,898	+		Sama_0940	0.38	-0.4
1,136,983	-		Sama_0940	0.51	-0.5
1,136,983	-		Sama_0940	0.51	-2.2
1,136,983	-		Sama_0940	0.51	+1.6
1,136,995	-		Sama_0940	0.52	+1.6
1,136,995	-		Sama_0940	0.52	+0.1
1,136,995	-		Sama_0940	0.52	-1.2
1,136,997	+		Sama_0940	0.53	-0.4
1,136,998	-		Sama_0940	0.53	+0.9
1,136,998	-		Sama_0940	0.53	+0.6
1,137,040	-		Sama_0940	0.59	+0.8
1,137,040	-		Sama_0940	0.59	-0.1
1,137,040	-		Sama_0940	0.59	-2.5
1,137,040	-		Sama_0940	0.59	-0.1
1,137,063	+		Sama_0940	0.62	+3.2
1,137,063	+		Sama_0940	0.62	-1.2
1,137,063	+		Sama_0940	0.62	+1.6
1,137,064	-		Sama_0940	0.62	-1.0
1,137,071	+		Sama_0940	0.63	-0.2
1,137,071	+		Sama_0940	0.63	+0.2
1,137,072	-		Sama_0940	0.63	-1.9
1,137,072	-		Sama_0940	0.63	-1.4
1,137,087	+		Sama_0940	0.66	+0.5
1,137,087	+		Sama_0940	0.66	-0.9
1,137,087	+		Sama_0940	0.66	-0.7
1,137,088	-		Sama_0940	0.66	-2.3
1,137,088	-		Sama_0940	0.66	+1.1
1,137,100	-		Sama_0940	0.68	-0.9
1,137,147	-		Sama_0940	0.74	-0.5
1,137,147	-		Sama_0940	0.74	-0.4
1,137,147	-		Sama_0940	0.74	-0.3
1,137,270	+				+2.2
1,137,311	+				-0.6
1,137,312	-				-0.3
1,137,330	-				-1.3
1,137,339	+				-2.1
1,137,340	-				-1.2
1,137,340	-				+0.9
1,137,343	+				-0.8
1,137,345	+				+0.5
1,137,352	-				-0.8
1,137,352	-				+1.2
1,137,352	-				+2.2
1,137,371	+				+1.6
1,137,372	-				-1.9
1,137,372	-				+2.4
1,137,372	-				+2.0
1,137,427	-				+0.0
1,137,443	+				-1.4
1,137,505	+				-1.7
1,137,505	+				+1.0
1,137,505	+				-2.1
1,137,512	+				+0.4
1,137,529	+				-0.4
1,137,538	-				-0.7
1,137,540	+				-0.3
1,137,540	+				-1.1
1,137,541	-				+0.8
1,137,541	-				+0.6
1,137,547	+				+0.6
1,137,547	+				+3.2
1,137,548	-				+1.6
1,137,548	-				+1.7
1,137,548	-				-0.3
1,137,548	-				+2.0
1,137,548	-				-0.5