Strain Fitness in Shewanella amazonensis SB2B around Sama_2249

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
2,712,212	-				-0.3
2,713,217	-		Sama_2249	0.36	+0.2
2,713,317	-		Sama_2249	0.47	-1.4
2,713,322	-		Sama_2249	0.47	-1.6
2,713,410	+		Sama_2249	0.57	-1.8
2,713,415	-		Sama_2249	0.57	+1.3
2,713,529	+		Sama_2249	0.70	+0.8
2,713,530	-		Sama_2249	0.70	-0.8
2,713,553	-		Sama_2249	0.72	-0.8
2,713,592	-		Sama_2249	0.77	-1.1
2,713,592	-		Sama_2249	0.77	-0.0
2,713,608	-		Sama_2249	0.78	-0.4
2,713,608	-		Sama_2249	0.78	-0.5
2,713,664	+		Sama_2249	0.84	-0.5
2,713,665	-		Sama_2249	0.85	+0.8
2,713,854	-				+0.2
2,713,990	-		Sama_2250	0.25	+1.1
2,713,990	-		Sama_2250	0.25	+1.1
2,714,056	-		Sama_2250	0.34	-0.3
2,714,113	-		Sama_2250	0.42	-0.1
2,714,113	-		Sama_2250	0.42	-0.6
2,714,134	-		Sama_2250	0.45	-0.5
2,714,137	-		Sama_2250	0.45	-0.5
2,714,368	-		Sama_2250	0.77	+0.0
2,714,472	-				+0.1
2,714,516	-				-1.0
2,714,590	-				-0.9
2,714,628	-		Sama_2251	0.11	+0.5
2,714,638	-		Sama_2251	0.12	+0.1
2,714,692	-		Sama_2251	0.19	-2.2
2,714,694	-		Sama_2251	0.19	+0.5
2,714,710	-		Sama_2251	0.21	-1.0
2,714,728	-		Sama_2251	0.23	-0.1
2,714,742	-		Sama_2251	0.24	-1.0
2,714,751	-		Sama_2251	0.25	-4.0
2,714,770	-		Sama_2251	0.28	-0.0
2,714,770	-		Sama_2251	0.28	-2.0