Strain Fitness in Shewanella amazonensis SB2B around Sama_R0074

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
2,226,228	+				-0.9
2,226,229	-				+0.5
2,226,252	-				-1.9
2,226,305	-				-0.8
2,226,323	-				-1.3
2,226,376	-				-1.2
2,226,376	-				+0.4
2,226,379	+				+1.0
2,226,380	-				-2.1
2,226,407	+				-1.4
2,226,408	-				-1.2
2,226,408	-				-1.2
2,226,408	-				-2.2
2,226,408	-				+1.1
2,226,413	+				-1.2
2,226,434	+				+0.4
2,226,435	-				-0.0
2,226,435	-				-0.2
2,226,484	-				+2.0
2,226,484	-				+0.4
2,226,756	-				+0.6
2,226,772	+				-0.9
2,226,801	+				-0.8
2,226,801	+				+1.5
2,226,802	-				-0.9
2,226,808	-				+0.8
2,226,808	-				-0.6
2,226,810	+				-0.3
2,226,811	-				-0.3
2,226,811	-				-0.0
2,226,811	-				+0.7
2,226,811	-				+0.4
2,226,926	+				-0.2
2,226,926	+				-1.0
2,226,926	+				-0.8
2,226,926	+				+0.4
2,226,927	-				-0.1
2,226,927	-				-1.2
2,226,927	-				-0.2
2,226,947	-				+1.3
2,226,947	-				-2.1
2,227,502	+		Sama_R0077	0.55	-0.5
2,227,713	+				+1.4
2,227,745	+				+0.4
2,227,745	+				+0.8
2,227,884	-		Sama_1829	0.11	-0.8
2,227,897	+		Sama_1829	0.12	-0.6
2,227,943	+		Sama_1829	0.14	-0.8
2,227,944	-		Sama_1829	0.14	-0.2
2,227,944	-		Sama_1829	0.14	+0.1
2,228,075	-		Sama_1829	0.21	-0.2
2,228,087	+		Sama_1829	0.22	-1.9
2,228,088	-		Sama_1829	0.22	-0.1
2,228,088	-		Sama_1829	0.22	+0.1
2,228,088	-		Sama_1829	0.22	-1.2
2,228,106	-		Sama_1829	0.23	+1.1
2,228,151	-		Sama_1829	0.25	+0.9
2,228,158	-		Sama_1829	0.25	-0.5
2,228,180	-		Sama_1829	0.26	+0.7
2,228,183	+		Sama_1829	0.26	+1.4
2,228,183	+		Sama_1829	0.26	-1.3
2,228,184	-		Sama_1829	0.27	+1.4
2,228,203	-		Sama_1829	0.28	-0.1