Strain Fitness in Shewanella amazonensis SB2B around Sama_1718

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
2,102,756	+		Sama_1717	0.55	+2.6
2,102,756	+		Sama_1717	0.55	-0.0
2,102,757	-		Sama_1717	0.55	+0.2
2,102,757	-		Sama_1717	0.55	-0.5
2,102,757	-		Sama_1717	0.55	+0.8
2,102,852	+		Sama_1717	0.60	+1.0
2,102,852	+		Sama_1717	0.60	+2.6
2,102,852	+		Sama_1717	0.60	+0.4
2,102,852	+		Sama_1717	0.60	-0.6
2,102,853	-		Sama_1717	0.60	+0.2
2,102,885	-		Sama_1717	0.62	+0.4
2,102,902	-		Sama_1717	0.63	+0.3
2,102,928	-		Sama_1717	0.65	-0.6
2,102,947	-		Sama_1717	0.66	-1.0
2,102,963	+		Sama_1717	0.67	+1.6
2,102,964	-		Sama_1717	0.67	-1.2
2,102,964	-		Sama_1717	0.67	-0.2
2,102,967	+		Sama_1717	0.67	-0.3
2,102,967	+		Sama_1717	0.67	-0.9
2,102,967	+		Sama_1717	0.67	+0.7
2,102,968	-		Sama_1717	0.67	-0.8
2,102,968	-		Sama_1717	0.67	+0.7
2,102,968	-		Sama_1717	0.67	-0.2
2,102,970	+		Sama_1717	0.67	+0.3
2,102,970	+		Sama_1717	0.67	+0.5
2,102,970	+		Sama_1717	0.67	-0.1
2,102,971	-		Sama_1717	0.67	+1.3
2,102,971	-		Sama_1717	0.67	-0.1
2,102,971	-		Sama_1717	0.67	-0.4
2,103,018	+		Sama_1717	0.70	+0.9
2,103,018	+		Sama_1717	0.70	+0.1
2,103,019	-		Sama_1717	0.70	+0.5
2,103,019	-		Sama_1717	0.70	-1.5
2,103,084	+		Sama_1717	0.73	-0.6
2,103,099	+		Sama_1717	0.74	+0.1
2,103,125	+		Sama_1717	0.76	+1.2
2,103,126	-		Sama_1717	0.76	-0.7
2,103,149	+		Sama_1717	0.77	+1.2
2,103,154	+		Sama_1717	0.77	+1.4
2,103,155	-		Sama_1717	0.77	-2.4
2,103,171	+		Sama_1717	0.78	-0.2
2,103,171	+		Sama_1717	0.78	+0.3
2,103,171	+		Sama_1717	0.78	+0.3
2,103,172	-		Sama_1717	0.78	-0.9
2,103,172	-		Sama_1717	0.78	+0.1
2,103,202	-		Sama_1717	0.80	-0.9
2,103,279	+		Sama_1717	0.84	-0.2
2,103,284	+		Sama_1717	0.85	+0.1
2,103,389	-				-0.2
2,103,412	-				-0.3
2,103,534	+				-0.3
2,103,534	+				-0.7
2,103,547	+				+0.3
2,103,559	-				-0.7
2,103,623	-				-0.0
2,103,660	+				-0.2
2,103,660	+				+0.6
2,103,676	-				+2.0
2,103,691	-				+1.4
2,103,744	+				+0.6
2,103,744	+				+0.9
2,103,821	+		Sama_1718	0.12	-0.6
2,103,821	+		Sama_1718	0.12	+0.4
2,103,821	+		Sama_1718	0.12	-0.3
2,103,852	+		Sama_1718	0.17	-1.4
2,103,882	+		Sama_1718	0.21	+1.0
2,103,882	+		Sama_1718	0.21	+0.1
2,103,929	+		Sama_1718	0.28	-1.5
2,103,929	+		Sama_1718	0.28	-0.5
2,104,061	+		Sama_1718	0.48	-0.6
2,104,103	+		Sama_1718	0.54	+0.7
2,104,103	+		Sama_1718	0.54	-1.2
2,104,153	+		Sama_1718	0.61	-0.7
2,104,153	+		Sama_1718	0.61	-0.3
2,104,216	+		Sama_1718	0.71	-1.0
2,104,266	+		Sama_1718	0.78	+0.2
2,104,266	+		Sama_1718	0.78	-0.4
2,104,311	+		Sama_1718	0.85	-0.6
2,104,317	+		Sama_1718	0.86	+0.8
2,104,317	+		Sama_1718	0.86	-0.4
2,104,318	-		Sama_1718	0.86	-2.7
2,104,323	+		Sama_1718	0.87	-0.1
2,104,323	+		Sama_1718	0.87	+0.0
2,104,323	+		Sama_1718	0.87	-0.9
2,104,335	+		Sama_1718	0.88	-0.7
2,104,371	-				+1.0
2,104,374	+				+0.6
2,104,411	+				-0.5
2,104,462	+				+0.1
2,104,497	+				+0.2
2,104,497	+				-1.1
2,104,497	+				+0.0
2,104,497	+				+0.4
2,104,502	+				-0.6
2,104,584	+				+0.7
2,104,630	+				-0.4
2,104,630	+				-0.1
2,104,630	+				+1.0
2,104,847	-		Sama_1719	0.29	+1.4
2,104,864	+		Sama_1719	0.30	+0.7
2,104,864	+		Sama_1719	0.30	+1.4
2,104,865	-		Sama_1719	0.30	-0.6
2,104,877	+		Sama_1719	0.31	+0.1
2,104,883	+		Sama_1719	0.32	+1.1
2,105,139	+		Sama_1719	0.54	+0.0
2,105,140	-		Sama_1719	0.55	-1.2
2,105,175	+		Sama_1719	0.58	+0.4
2,105,257	-		Sama_1719	0.65	+0.8
2,105,320	+		Sama_1719	0.70	+0.0
2,105,348	+		Sama_1719	0.73	+0.9
2,105,348	+		Sama_1719	0.73	-0.5