Strain Fitness in Shewanella amazonensis SB2B around Sama_1536

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
1,872,660	+				-0.2
1,872,660	+				+0.5
1,872,729	+				-1.3
1,872,887	+		Sama_R0054	0.86	-1.1
1,872,887	+		Sama_R0054	0.86	-0.0
1,872,906	+				-0.7
1,872,910	+				+1.2
1,872,931	+				+0.1
1,872,958	+				-0.7
1,873,182	-				-0.6
1,873,202	+				-1.6
1,873,203	-				-2.1
1,873,203	-				+0.7
1,873,208	+				-2.3
1,873,208	+				-0.5
1,873,208	+				-0.3
1,873,209	-				-2.3
1,873,309	+				-0.7
1,873,391	-				-0.3
1,873,391	-				-1.3
1,873,395	+				-0.1
1,873,403	+				-0.2
1,873,404	-				+0.5
1,873,435	+				+0.5
1,873,467	+		Sama_1536	0.13	-0.5
1,873,487	+		Sama_1536	0.18	+1.0
1,873,570	+		Sama_1536	0.42	-1.3
1,873,571	-		Sama_1536	0.42	-1.8
1,873,571	-		Sama_1536	0.42	+0.2
1,873,599	+		Sama_1536	0.50	+0.3
1,873,599	+		Sama_1536	0.50	-0.7
1,873,600	-		Sama_1536	0.50	-1.1
1,873,600	-		Sama_1536	0.50	-1.5
1,873,600	-		Sama_1536	0.50	-0.1
1,873,600	-		Sama_1536	0.50	+0.1
1,873,600	-		Sama_1536	0.50	-1.5
1,873,629	-		Sama_1536	0.58	-0.4
1,873,659	-		Sama_1536	0.67	+0.1
1,873,665	-		Sama_1536	0.69	+1.1
1,873,787	-				+0.8