Strain Fitness in Shewanella amazonensis SB2B around Sama_1535

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
1,865,631	+		Sama_1534	0.39	-2.3
1,865,631	+		Sama_1534	0.39	+0.6
1,865,631	+		Sama_1534	0.39	+0.0
1,865,631	+		Sama_1534	0.39	-0.2
1,865,631	+		Sama_1534	0.39	+0.2
1,865,632	-		Sama_1534	0.40	-0.9
1,865,640	+		Sama_1534	0.40	+0.9
1,865,640	+		Sama_1534	0.40	-0.4
1,865,640	+		Sama_1534	0.40	+0.3
1,865,641	-		Sama_1534	0.40	+0.5
1,865,641	-		Sama_1534	0.40	+1.1
1,865,641	-		Sama_1534	0.40	-0.8
1,865,664	-		Sama_1534	0.42	-1.7
1,865,681	-		Sama_1534	0.43	+0.5
1,865,738	+		Sama_1534	0.48	+0.8
1,865,738	+		Sama_1534	0.48	-0.5
1,865,738	+		Sama_1534	0.48	-0.7
1,865,738	+		Sama_1534	0.48	+1.5
1,865,739	-		Sama_1534	0.48	+0.5
1,865,739	-		Sama_1534	0.48	+0.4
1,865,739	-		Sama_1534	0.48	-0.3
1,865,739	-		Sama_1534	0.48	+0.0
1,865,739	-		Sama_1534	0.48	-0.8
1,865,739	-		Sama_1534	0.48	+0.2
1,865,739	-		Sama_1534	0.48	+0.2
1,865,739	-		Sama_1534	0.48	+0.2
1,865,740	+		Sama_1534	0.48	+1.5
1,865,748	+		Sama_1534	0.48	-1.1
1,865,777	+		Sama_1534	0.50	+0.7
1,865,778	-		Sama_1534	0.51	-0.2
1,865,788	+		Sama_1534	0.51	+1.5
1,865,789	-		Sama_1534	0.51	-0.8
1,865,789	-		Sama_1534	0.51	-0.4
1,865,848	+		Sama_1534	0.56	+0.2
1,865,848	+		Sama_1534	0.56	-0.0
1,865,849	-		Sama_1534	0.56	-2.2
1,865,849	-		Sama_1534	0.56	+0.3
1,865,849	-		Sama_1534	0.56	-0.1
1,865,908	+		Sama_1534	0.60	+1.0
1,865,908	+		Sama_1534	0.60	+0.5
1,865,908	+		Sama_1534	0.60	-0.8
1,865,909	-		Sama_1534	0.60	-0.0
1,865,909	-		Sama_1534	0.60	-0.4
1,865,912	+		Sama_1534	0.61	+0.8
1,865,948	+		Sama_1534	0.63	-0.5
1,865,949	-		Sama_1534	0.63	+0.5
1,866,068	-		Sama_1534	0.72	+0.3
1,866,077	+		Sama_1534	0.73	+0.4
1,866,077	+		Sama_1534	0.73	+0.3
1,866,077	+		Sama_1534	0.73	-0.8
1,866,078	-		Sama_1534	0.73	+0.6
1,866,078	-		Sama_1534	0.73	+0.7
1,866,114	+		Sama_1534	0.76	+0.2
1,866,209	+		Sama_1534	0.83	+0.5
1,866,209	+		Sama_1534	0.83	+0.8
1,866,214	-		Sama_1534	0.83	-1.4
1,866,234	+		Sama_1534	0.85	+1.8
1,866,234	+		Sama_1534	0.85	+0.3
1,866,235	-		Sama_1534	0.85	-0.3
1,866,276	+		Sama_1534	0.88	-1.1
1,866,276	+		Sama_1534	0.88	+0.0
1,866,307	-				-0.3
1,866,372	-				-1.8
1,866,403	+				-0.8
1,866,403	+				-0.5
1,866,403	+				-0.5
1,866,405	+				-1.7
1,866,405	+				+0.2
1,866,405	+				-1.3
1,866,433	+				+0.3
1,866,442	-				+0.9
1,866,481	+				+0.5
1,866,564	+				+0.5
1,866,564	+				-2.1
1,866,567	+				-0.0
1,867,150	+				+0.4
1,867,151	-				-1.8
1,867,151	-				+1.0
1,867,219	-				+0.8
1,867,231	-				-0.1
1,867,233	-				+1.5
1,867,233	-				+0.6
1,867,278	+				-0.4
1,867,279	-				+0.8
1,867,279	-				+0.1
1,867,310	+				+0.7
1,867,313	-				-0.2
1,867,336	+				+1.0
1,867,367	+				+0.5
1,867,367	+				-1.8
1,867,368	-				-0.4
1,867,368	-				-0.5
1,867,369	+				+1.2
1,867,369	+				+0.9
1,867,404	+				+0.3