Strain Fitness in Shewanella oneidensis MR-1 around SO_t091

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
3,747,875	+		SO3581	0.42	+0.1
3,748,103	+				-0.2
3,748,174	+	tRNA-Leu-5	SO_t092	0.34	+0.2
3,748,360	+				+0.0
3,748,368	-				+0.1
3,748,462	+				+0.1
3,748,483	+				-0.0
3,748,483	+				+0.8
3,748,491	-				+0.8
3,748,495	+				-0.4
3,748,572	+				-0.8
3,748,572	+				-0.2
3,748,580	-				-0.4
3,748,580	-				-1.4
3,748,629	-				-0.6
3,748,636	-				+0.8
3,748,641	-				-2.4
3,748,750	+		SO3582	0.14	-2.2
3,748,751	-		SO3582	0.14	-0.3
3,748,762	+		SO3582	0.15	+0.1
3,748,830	-		SO3582	0.19	-0.2
3,748,830	-		SO3582	0.19	-0.0
3,748,988	-		SO3582	0.29	-1.5
3,749,005	+		SO3582	0.30	-0.5
3,749,005	+		SO3582	0.30	-0.2
3,749,040	+		SO3582	0.32	+0.4
3,749,075	-		SO3582	0.34	+0.2
3,749,075	-		SO3582	0.34	+0.8