Strain Fitness in Shewanella oneidensis MR-1 around SO4122

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
4,279,658	-		SO4121	0.20	-0.2
4,279,696	+		SO4121	0.23	-0.4
4,279,696	+		SO4121	0.23	-0.1
4,279,705	+		SO4121	0.24	+0.9
4,279,705	+		SO4121	0.24	-0.1
4,279,713	-		SO4121	0.25	+0.3
4,279,738	+		SO4121	0.27	-0.4
4,279,831	-		SO4121	0.36	-0.4
4,279,876	+		SO4121	0.41	-0.1
4,279,877	-		SO4121	0.41	+0.7
4,279,896	+		SO4121	0.43	-0.1
4,279,910	-		SO4121	0.44	+0.3
4,279,910	-		SO4121	0.44	+0.3
4,280,013	-		SO4121	0.54	+0.2
4,280,040	+		SO4121	0.56	+0.2
4,280,106	+		SO4121	0.63	-0.7
4,280,324	+		SO4121	0.84	+0.1
4,280,341	-		SO4121	0.85	-0.6
4,280,370	+		SO4121	0.88	+0.2
4,280,412	-				-0.1
4,280,423	+				-1.0
4,280,431	-				+0.0
4,280,431	-				+0.3
4,280,431	-				+0.3
4,280,458	-				+0.1
4,280,505	-				-0.2
4,280,507	+				+0.5
4,280,528	+				+0.7
4,280,560	-				-1.6